RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 PCNAP12004 261 aa19.8■□□□□ 0.76
CACNA1A-257ENST00000638009 CYP2A7P20853 494 aa19.8■□□□□ 0.76
CACNA1A-257ENST00000638009 IER5Q5VY09 327 aa19.8■□□□□ 0.76
CACNA1A-257ENST00000638009 EIF5AP63241 154 aaKnown RBP19.8■□□□□ 0.76
CACNA1A-257ENST00000638009 TTC26A0AVF1 554 aa19.8■□□□□ 0.76
CACNA1A-257ENST00000638009 SEC24AO95486 1093 aa19.8■□□□□ 0.76
CACNA1A-257ENST00000638009 NCOA4Q13772 614 aa19.8■□□□□ 0.76
CACNA1A-257ENST00000638009 NAB2Q15742 525 aa19.8■□□□□ 0.76
CACNA1A-257ENST00000638009 MTSS1LQ765P7 747 aa19.8■□□□□ 0.76
CACNA1A-257ENST00000638009 SKA1Q96BD8 255 aa19.8■□□□□ 0.76
CACNA1A-257ENST00000638009 SLC26A3P40879 764 aa19.8■□□□□ 0.76
CACNA1A-257ENST00000638009 SLC11A2P49281 568 aa19.8■□□□□ 0.76
CACNA1A-257ENST00000638009 IQCF2Q8IXL9 164 aa19.8■□□□□ 0.76
CACNA1A-257ENST00000638009 CST11Q9H112 138 aa19.8■□□□□ 0.76
CACNA1A-257ENST00000638009 UPB1Q9UBR1 384 aa19.8■□□□□ 0.76
CACNA1A-257ENST00000638009 ARHGEF17Q96PE2 2063 aaPredicted RBP19.8■□□□□ 0.76
CACNA1A-257ENST00000638009 DCKP27707 260 aa19.79■□□□□ 0.76
CACNA1A-257ENST00000638009 NR6A1Q15406 480 aa19.79■□□□□ 0.76
CACNA1A-257ENST00000638009 DHFR2Q86XF0 187 aa19.79■□□□□ 0.76
CACNA1A-257ENST00000638009 RPLP2P05387 115 aaKnown RBP19.79■□□□□ 0.76
CACNA1A-257ENST00000638009 PDK2Q15119 407 aa19.79■□□□□ 0.76
CACNA1A-257ENST00000638009 PLA2G6O60733 806 aa19.79■□□□□ 0.76
CACNA1A-257ENST00000638009 PLCL1Q15111 1095 aa19.79■□□□□ 0.76
CACNA1A-257ENST00000638009 C4orf46Q504U0 113 aa19.79■□□□□ 0.76
CACNA1A-257ENST00000638009 QRFPRQ96P65 431 aa19.79■□□□□ 0.76
CACNA1A-257ENST00000638009 PCDHA6Q9UN73 950 aa19.79■□□□□ 0.76
CACNA1A-257ENST00000638009 GIT1Q9Y2X7 761 aa19.79■□□□□ 0.76
CACNA1A-257ENST00000638009 MFHAS1Q9Y4C4 1052 aa19.79■□□□□ 0.76
CACNA1A-257ENST00000638009 PCDHA8Q9Y5H6 950 aa19.79■□□□□ 0.76
CACNA1A-257ENST00000638009 BAG6P46379 1132 aa19.79■□□□□ 0.76
CACNA1A-257ENST00000638009 CASP5P51878 434 aa19.79■□□□□ 0.76
CACNA1A-257ENST00000638009 ATP6V0D2Q8N8Y2 350 aa19.79■□□□□ 0.76
CACNA1A-257ENST00000638009 NEDD4LQ96PU5 975 aa19.79■□□□□ 0.76
CACNA1A-257ENST00000638009 NFKB1P19838 968 aa19.79■□□□□ 0.76
CACNA1A-257ENST00000638009 ACTR3P61158 418 aa19.79■□□□□ 0.76
CACNA1A-257ENST00000638009 MAP3K19Q56UN5 1328 aa19.79■□□□□ 0.76
CACNA1A-257ENST00000638009 SIX5Q8N196 739 aa19.79■□□□□ 0.76
CACNA1A-257ENST00000638009 SPPL2AQ8TCT8 520 aa19.79■□□□□ 0.76
CACNA1A-257ENST00000638009 CLK3P49761 638 aaKnown RBP19.79■□□□□ 0.76
CACNA1A-257ENST00000638009 WDR72Q3MJ13 1102 aa19.79■□□□□ 0.76
CACNA1A-257ENST00000638009 PHB2Q99623 299 aa19.79■□□□□ 0.76
CACNA1A-257ENST00000638009 KCNIP3Q9Y2W7 256 aa19.79■□□□□ 0.76
CACNA1A-257ENST00000638009 NAIF1Q69YI7 327 aaPredicted RBP19.79■□□□□ 0.76
CACNA1A-257ENST00000638009 RFX7Q2KHR2 1363 aa19.78■□□□□ 0.76
CACNA1A-257ENST00000638009 G2E3Q7L622 706 aa19.78■□□□□ 0.76
CACNA1A-257ENST00000638009 APOBEC3FQ8IUX4 373 aaKnown RBP19.78■□□□□ 0.76
CACNA1A-257ENST00000638009 DHRSXQ8N5I4 330 aa19.78■□□□□ 0.76
CACNA1A-257ENST00000638009 ZNF655Q8N720 491 aaPredicted RBP19.78■□□□□ 0.76
CACNA1A-257ENST00000638009 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.78■□□□□ 0.76
CACNA1A-257ENST00000638009 BCS1LQ9Y276 419 aa19.78■□□□□ 0.76
CACNA1A-257ENST00000638009 MED24O75448 989 aa19.78■□□□□ 0.76
CACNA1A-257ENST00000638009 H0YJX3 145 aa19.78■□□□□ 0.76
CACNA1A-257ENST00000638009 FAM187BQ17R55 369 aa19.78■□□□□ 0.76
CACNA1A-257ENST00000638009 EEPD1Q7L9B9 569 aa19.78■□□□□ 0.76
CACNA1A-257ENST00000638009 FAM20CQ8IXL6 584 aa19.78■□□□□ 0.76
CACNA1A-257ENST00000638009 COLGALT2Q8IYK4 626 aa19.78■□□□□ 0.76
CACNA1A-257ENST00000638009 RASGEF1AQ8N9B8 481 aa19.78■□□□□ 0.76
CACNA1A-257ENST00000638009 SSR3Q9UNL2 185 aa19.78■□□□□ 0.76
CACNA1A-257ENST00000638009 A0A1W2PQJ5 194 aa19.78■□□□□ 0.76
CACNA1A-257ENST00000638009 REM1O75628 298 aa19.78■□□□□ 0.76
CACNA1A-257ENST00000638009 HUNKP57058 714 aa19.78■□□□□ 0.76
CACNA1A-257ENST00000638009 MEA1Q16626 185 aa19.78■□□□□ 0.76
CACNA1A-257ENST00000638009 PRKAA1Q13131 559 aa19.78■□□□□ 0.76
CACNA1A-257ENST00000638009 CCDC54Q8NEL0 328 aa19.78■□□□□ 0.76
CACNA1A-257ENST00000638009 IST1P53990 364 aa19.78■□□□□ 0.76
CACNA1A-257ENST00000638009 STK4Q13043 487 aa19.78■□□□□ 0.76
CACNA1A-257ENST00000638009 BOLA3Q53S33 107 aa19.78■□□□□ 0.76
CACNA1A-257ENST00000638009 CDH9Q9ULB4 789 aa19.78■□□□□ 0.76
CACNA1A-257ENST00000638009 FAM25EA8MYX2 175 aa19.78■□□□□ 0.76
CACNA1A-257ENST00000638009 PSMD11O00231 422 aa19.78■□□□□ 0.76
CACNA1A-257ENST00000638009 UBDO15205 165 aa19.78■□□□□ 0.76
CACNA1A-257ENST00000638009 ZNF806P0C7X5 589 aa19.78■□□□□ 0.76
CACNA1A-257ENST00000638009 SOX11P35716 441 aa19.78■□□□□ 0.76
CACNA1A-257ENST00000638009 SLC34A1Q06495 639 aa19.78■□□□□ 0.76
CACNA1A-257ENST00000638009 NR1D2Q14995 579 aa19.78■□□□□ 0.76
CACNA1A-257ENST00000638009 OCLNQ16625 522 aa19.78■□□□□ 0.76
CACNA1A-257ENST00000638009 C10orf107Q8IVU9 208 aa19.78■□□□□ 0.76
CACNA1A-257ENST00000638009 THAP1Q9NVV9 213 aa19.78■□□□□ 0.76
CACNA1A-257ENST00000638009 IGSF9BQ9UPX0 1349 aa19.77■□□□□ 0.76
CACNA1A-257ENST00000638009 PTGES3LE9PB15 166 aa19.77■□□□□ 0.76
CACNA1A-257ENST00000638009 SLC16A4O15374 487 aa19.77■□□□□ 0.76
CACNA1A-257ENST00000638009 SLC25A12O75746 678 aa19.77■□□□□ 0.76
CACNA1A-257ENST00000638009 NUDT14O95848 222 aa19.77■□□□□ 0.76
CACNA1A-257ENST00000638009 GJA8P48165 433 aa19.77■□□□□ 0.76
CACNA1A-257ENST00000638009 PKN1Q16512 942 aa19.77■□□□□ 0.76
CACNA1A-257ENST00000638009 ZFP69Q49AA0 526 aa19.77■□□□□ 0.76
CACNA1A-257ENST00000638009 RBM20Q5T481 1227 aaKnown RBP19.77■□□□□ 0.76
CACNA1A-257ENST00000638009 CCNI2Q6ZMN8 369 aaPredicted RBP19.77■□□□□ 0.76
CACNA1A-257ENST00000638009 TCAIMQ8N3R3 496 aa19.77■□□□□ 0.76
CACNA1A-257ENST00000638009 DMTF1Q9Y222 760 aa19.77■□□□□ 0.76
CACNA1A-257ENST00000638009 NDUFAF1Q9Y375 327 aa19.77■□□□□ 0.76
CACNA1A-257ENST00000638009 IFNA6P05013 189 aa19.77■□□□□ 0.76
CACNA1A-257ENST00000638009 CDC42P60953 191 aa19.77■□□□□ 0.76
CACNA1A-257ENST00000638009 FGD3Q5JSP0 725 aa19.77■□□□□ 0.76
CACNA1A-257ENST00000638009 UBE2E3Q969T4 207 aa19.77■□□□□ 0.76
CACNA1A-257ENST00000638009 PPP1R16BQ96T49 567 aa19.77■□□□□ 0.76
CACNA1A-257ENST00000638009 CHURC1-FNTBB4DL54 471 aa19.77■□□□□ 0.76
CACNA1A-257ENST00000638009 ITGB6P18564 788 aa19.77■□□□□ 0.76
CACNA1A-257ENST00000638009 GRHL2Q6ISB3 625 aa19.77■□□□□ 0.76
CACNA1A-257ENST00000638009 ANKRD26P1Q6NSI1 321 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms