RNA–Protein interactions for RNA: ENST00000637004.1

CACNA1A-235, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,829 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-235ENST00000637004 AP3M2P53677 418 aa16.04■□□□□ 0.16
CACNA1A-235ENST00000637004 PTPN20Q4JDL3 420 aa16.04■□□□□ 0.16
CACNA1A-235ENST00000637004 N4BP2L1Q5TBK1 243 aaPredicted RBP16.04■□□□□ 0.16
CACNA1A-235ENST00000637004 IYDQ6PHW0 289 aa16.04■□□□□ 0.16
CACNA1A-235ENST00000637004 NPNTQ6UXI9 565 aa16.04■□□□□ 0.16
CACNA1A-235ENST00000637004 MAVSQ7Z434 540 aa16.04■□□□□ 0.16
CACNA1A-235ENST00000637004 CROCCP3Q8IVE0 287 aa16.04■□□□□ 0.16
CACNA1A-235ENST00000637004 EFCAB3Q8N7B9 438 aa16.04■□□□□ 0.16
CACNA1A-235ENST00000637004 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.04■□□□□ 0.16
CACNA1A-235ENST00000637004 HAUS8Q9BT25 410 aa16.04■□□□□ 0.16
CACNA1A-235ENST00000637004 MSTO1Q9BUK6 570 aa16.04■□□□□ 0.16
CACNA1A-235ENST00000637004 XPNPEP1Q9NQW7 623 aa16.04■□□□□ 0.16
CACNA1A-235ENST00000637004 PDLIM7Q9NR12 457 aa16.04■□□□□ 0.16
CACNA1A-235ENST00000637004 GABBR1Q9UBS5 961 aa16.04■□□□□ 0.16
CACNA1A-235ENST00000637004 USP18Q9UMW8 372 aa16.04■□□□□ 0.16
CACNA1A-235ENST00000637004 KCNN4O15554 427 aa16.03■□□□□ 0.16
CACNA1A-235ENST00000637004 DCXO43602 365 aa16.03■□□□□ 0.16
CACNA1A-235ENST00000637004 CDH2P19022 906 aaPredicted RBP16.03■□□□□ 0.16
CACNA1A-235ENST00000637004 EIF2AK2P19525 551 aaKnown RBP16.03■□□□□ 0.16
CACNA1A-235ENST00000637004 ZYXQ15942 572 aaKnown RBP16.03■□□□□ 0.16
CACNA1A-235ENST00000637004 RTP4Q96DX8 246 aa16.03■□□□□ 0.16
CACNA1A-235ENST00000637004 NIF3L1Q9GZT8 377 aa16.03■□□□□ 0.16
CACNA1A-235ENST00000637004 SDCBP2Q9H190 292 aa16.03■□□□□ 0.16
CACNA1A-235ENST00000637004 TBCCD1Q9NVR7 557 aa16.03■□□□□ 0.16
CACNA1A-235ENST00000637004 PNPOQ9NVS9 261 aa16.03■□□□□ 0.16
CACNA1A-235ENST00000637004 DCDC2Q9UHG0 476 aa16.03■□□□□ 0.16
CACNA1A-235ENST00000637004 PLIN3O60664 434 aa16.03■□□□□ 0.16
CACNA1A-235ENST00000637004 TRUB2O95900 331 aaKnown RBP16.03■□□□□ 0.16
CACNA1A-235ENST00000637004 MYCLP12524 364 aaPredicted RBP16.03■□□□□ 0.16
CACNA1A-235ENST00000637004 KCNA4P22459 653 aa16.03■□□□□ 0.16
CACNA1A-235ENST00000637004 PCSK6P29122 969 aa16.03■□□□□ 0.16
CACNA1A-235ENST00000637004 GHRHRQ02643 423 aa16.03■□□□□ 0.16
CACNA1A-235ENST00000637004 STRIP1Q5VSL9 837 aa16.03■□□□□ 0.16
CACNA1A-235ENST00000637004 C16orf46Q6P387 395 aa16.03■□□□□ 0.16
CACNA1A-235ENST00000637004 TRMT10BQ6PF06 316 aaKnown RBP16.03■□□□□ 0.16
CACNA1A-235ENST00000637004 SYTL5Q8TDW5 730 aaPredicted RBP16.03■□□□□ 0.16
CACNA1A-235ENST00000637004 PRPF31Q8WWY3 499 aaKnown RBP16.03■□□□□ 0.16
CACNA1A-235ENST00000637004 CLEC4DQ8WXI8 215 aa16.03■□□□□ 0.16
CACNA1A-235ENST00000637004 TFAP2BQ92481 460 aa16.03■□□□□ 0.16
CACNA1A-235ENST00000637004 EBNA1BP2Q99848 306 aaKnown RBP16.03■□□□□ 0.16
CACNA1A-235ENST00000637004 TRIM56Q9BRZ2 755 aaKnown RBP16.03■□□□□ 0.16
CACNA1A-235ENST00000637004 TDRD3Q9H7E2 651 aaKnown RBP16.03■□□□□ 0.16
CACNA1A-235ENST00000637004 GNEQ9Y223 722 aaKnown RBP16.03■□□□□ 0.16
CACNA1A-235ENST00000637004 TOP3BO95985 862 aaKnown RBP16.02■□□□□ 0.16
CACNA1A-235ENST00000637004 EGFRP00533 1210 aa16.02■□□□□ 0.16
CACNA1A-235ENST00000637004 LPIN1Q14693 890 aa16.02■□□□□ 0.16
CACNA1A-235ENST00000637004 METTL21CQ5VZV1 264 aa16.02■□□□□ 0.16
CACNA1A-235ENST00000637004 C16orf89Q6UX73 402 aa16.02■□□□□ 0.16
CACNA1A-235ENST00000637004 C4orf22Q6V702 233 aa16.02■□□□□ 0.16
CACNA1A-235ENST00000637004 ERI1Q8IV48 349 aaKnown RBP16.02■□□□□ 0.16
CACNA1A-235ENST00000637004 PHTF2Q8N3S3 785 aa16.02■□□□□ 0.16
CACNA1A-235ENST00000637004 EMC1Q8N766 993 aa16.02■□□□□ 0.16
CACNA1A-235ENST00000637004 LHX5Q9H2C1 402 aa16.02■□□□□ 0.16
CACNA1A-235ENST00000637004 CNTNAP2Q9UHC6 1331 aa16.02■□□□□ 0.16
CACNA1A-235ENST00000637004 ZBED1O96006 694 aa16.02■□□□□ 0.15
CACNA1A-235ENST00000637004 PIGRP01833 764 aa16.02■□□□□ 0.15
CACNA1A-235ENST00000637004 CDH6P55285 790 aa16.02■□□□□ 0.15
CACNA1A-235ENST00000637004 ABCE1P61221 599 aaKnown RBP16.02■□□□□ 0.15
CACNA1A-235ENST00000637004 KLF10Q13118 480 aa16.02■□□□□ 0.15
CACNA1A-235ENST00000637004 TAF5Q15542 800 aa16.02■□□□□ 0.15
CACNA1A-235ENST00000637004 TICAM1Q8IUC6 712 aa16.02■□□□□ 0.15
CACNA1A-235ENST00000637004 SLC4A11Q8NBS3 891 aa16.02■□□□□ 0.15
CACNA1A-235ENST00000637004 FNDC8Q8TC99 324 aa16.02■□□□□ 0.15
CACNA1A-235ENST00000637004 TSPAN18Q96SJ8 248 aa16.02■□□□□ 0.15
CACNA1A-235ENST00000637004 SORT1Q99523 831 aa16.02■□□□□ 0.15
CACNA1A-235ENST00000637004 SLX1AQ9BQ83 275 aa16.02■□□□□ 0.15
CACNA1A-235ENST00000637004 MAP3K20Q9NYL2 800 aaKnown RBP16.02■□□□□ 0.15
CACNA1A-235ENST00000637004 RSL24D1Q9UHA3 163 aaKnown RBP16.02■□□□□ 0.15
CACNA1A-235ENST00000637004 EMCNQ9ULC0 261 aa16.02■□□□□ 0.15
CACNA1A-235ENST00000637004 SH3GLB1Q9Y371 365 aa16.02■□□□□ 0.15
CACNA1A-235ENST00000637004 CEPT1Q9Y6K0 416 aa16.02■□□□□ 0.15
CACNA1A-235ENST00000637004 ZNF195O14628 629 aa16.01■□□□□ 0.15
CACNA1A-235ENST00000637004 CCDC130P13994 396 aa16.01■□□□□ 0.15
CACNA1A-235ENST00000637004 MMRN1Q13201 1228 aa16.01■□□□□ 0.15
CACNA1A-235ENST00000637004 PEX6Q13608 980 aa16.01■□□□□ 0.15
CACNA1A-235ENST00000637004 FLOT2Q14254 428 aa16.01■□□□□ 0.15
CACNA1A-235ENST00000637004 PGM5Q15124 567 aa16.01■□□□□ 0.15
CACNA1A-235ENST00000637004 FAXCQ5TGI0 409 aa16.01■□□□□ 0.15
CACNA1A-235ENST00000637004 DENND1BQ6P3S1 775 aa16.01■□□□□ 0.15
CACNA1A-235ENST00000637004 ISLR2Q6UXK2 745 aa16.01■□□□□ 0.15
CACNA1A-235ENST00000637004 CYS1Q717R9 158 aa16.01■□□□□ 0.15
CACNA1A-235ENST00000637004 GCOM2Q9BZD3 368 aaPredicted RBP16.01■□□□□ 0.15
CACNA1A-235ENST00000637004 ASNSD1Q9NWL6 643 aa16.01■□□□□ 0.15
CACNA1A-235ENST00000637004 CDY2AQ9Y6F7 541 aa16.01■□□□□ 0.15
CACNA1A-235ENST00000637004 CDY1Q9Y6F8 540 aa16.01■□□□□ 0.15
CACNA1A-235ENST00000637004 TESPA1A2RU30 521 aaPredicted RBP16.01■□□□□ 0.15
CACNA1A-235ENST00000637004 MED7O43513 233 aa16.01■□□□□ 0.15
CACNA1A-235ENST00000637004 ZMPSTE24O75844 475 aa16.01■□□□□ 0.15
CACNA1A-235ENST00000637004 ENDOD1O94919 500 aa16.01■□□□□ 0.15
CACNA1A-235ENST00000637004 OATP04181 439 aa16.01■□□□□ 0.15
CACNA1A-235ENST00000637004 THRAP10827 490 aa16.01■□□□□ 0.15
CACNA1A-235ENST00000637004 HARS2P49590 506 aaKnown RBP16.01■□□□□ 0.15
CACNA1A-235ENST00000637004 PCLAFQ15004 111 aa16.01■□□□□ 0.15
CACNA1A-235ENST00000637004 ZBTB41Q5SVQ8 909 aa16.01■□□□□ 0.15
CACNA1A-235ENST00000637004 SMYD5Q6GMV2 418 aa16.01■□□□□ 0.15
CACNA1A-235ENST00000637004 DUS1LQ6P1R4 473 aaKnown RBP16.01■□□□□ 0.15
CACNA1A-235ENST00000637004 ZBTB45Q96K62 511 aaPredicted RBP16.01■□□□□ 0.15
CACNA1A-235ENST00000637004 SIGLEC10Q96LC7 697 aa16.01■□□□□ 0.15
CACNA1A-235ENST00000637004 HAPLN2Q9GZV7 340 aa16.01■□□□□ 0.15
CACNA1A-235ENST00000637004 SEPT9Q9UHD8 586 aaPredicted RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms