RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 MYO1EQ12965 1108 aa5.07□□□□□ -1.6
SDCBP-213ENST00000630925 TUBB2AQ13885 445 aa5.07□□□□□ -1.6
SDCBP-213ENST00000630925 GIT2Q14161 759 aa5.07□□□□□ -1.6
SDCBP-213ENST00000630925 SEC23BQ15437 767 aa5.07□□□□□ -1.6
SDCBP-213ENST00000630925 KCTD21Q4G0X4 260 aa5.07□□□□□ -1.6
SDCBP-213ENST00000630925 CT83Q5H943 113 aa5.07□□□□□ -1.6
SDCBP-213ENST00000630925 MDH1BQ5I0G3 518 aa5.07□□□□□ -1.6
SDCBP-213ENST00000630925 RNFT1Q5M7Z0 435 aa5.07□□□□□ -1.6
SDCBP-213ENST00000630925 C8orf74Q6P047 294 aa5.07□□□□□ -1.6
SDCBP-213ENST00000630925 RSPH3Q86UC2 560 aa5.07□□□□□ -1.6
SDCBP-213ENST00000630925 COMTD1Q86VU5 262 aa5.07□□□□□ -1.6
SDCBP-213ENST00000630925 DENND6AQ8IWF6 608 aa5.07□□□□□ -1.6
SDCBP-213ENST00000630925 BBS5Q8N3I7 341 aa5.07□□□□□ -1.6
SDCBP-213ENST00000630925 ZCCHC7Q8N3Z6 543 aaKnown RBP5.07□□□□□ -1.6
SDCBP-213ENST00000630925 RNF10Q8N5U6 811 aaKnown RBP5.07□□□□□ -1.6
SDCBP-213ENST00000630925 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.07□□□□□ -1.6
SDCBP-213ENST00000630925 URGCPQ8TCY9 931 aa5.07□□□□□ -1.6
SDCBP-213ENST00000630925 RHBDD1Q8TEB9 315 aa5.07□□□□□ -1.6
SDCBP-213ENST00000630925 SCFD2Q8WU76 684 aa5.07□□□□□ -1.6
SDCBP-213ENST00000630925 CACTINQ8WUQ7 758 aaKnown RBP5.07□□□□□ -1.6
SDCBP-213ENST00000630925 PEX13Q92968 403 aa5.07□□□□□ -1.6
SDCBP-213ENST00000630925 SGK3Q96BR1 496 aa5.07□□□□□ -1.6
SDCBP-213ENST00000630925 EAF2Q96CJ1 260 aaPredicted RBP5.07□□□□□ -1.6
SDCBP-213ENST00000630925 ART5Q96L15 291 aa5.07□□□□□ -1.6
SDCBP-213ENST00000630925 GCNAQ96QF7 691 aa5.07□□□□□ -1.6
SDCBP-213ENST00000630925 RUFY1Q96T51 708 aa5.07□□□□□ -1.6
SDCBP-213ENST00000630925 UHRF1Q96T88 793 aaPredicted RBP5.07□□□□□ -1.6
SDCBP-213ENST00000630925 TUBB2BQ9BVA1 445 aa5.07□□□□□ -1.6
SDCBP-213ENST00000630925 USP26Q9BXU7 913 aa5.07□□□□□ -1.6
SDCBP-213ENST00000630925 EIF2AQ9BY44 585 aaKnown RBP5.07□□□□□ -1.6
SDCBP-213ENST00000630925 SERHL2Q9H4I8 314 aa5.07□□□□□ -1.6
SDCBP-213ENST00000630925 IL21Q9HBE4 155 aa5.07□□□□□ -1.6
SDCBP-213ENST00000630925 AGAP1Q9UPQ3 857 aa5.07□□□□□ -1.6
SDCBP-213ENST00000630925 MAST1Q9Y2H9 1570 aa5.07□□□□□ -1.6
SDCBP-213ENST00000630925 RAD50Q92878 1312 aa5.07□□□□□ -1.6
SDCBP-213ENST00000630925 KDM5AP29375 1690 aaKnown RBP5.07□□□□□ -1.6
SDCBP-213ENST00000630925 STX16-NPEPL1H3BU86 382 aa5.06□□□□□ -1.6
SDCBP-213ENST00000630925 FCHO1O14526 889 aa5.06□□□□□ -1.6
SDCBP-213ENST00000630925 NVLO15381 856 aaKnown RBP5.06□□□□□ -1.6
SDCBP-213ENST00000630925 NIPSNAP2O75323 286 aa5.06□□□□□ -1.6
SDCBP-213ENST00000630925 ADH1BP00325 375 aa5.06□□□□□ -1.6
SDCBP-213ENST00000630925 ANXA2P07355 339 aaKnown RBP5.06□□□□□ -1.6
SDCBP-213ENST00000630925 TUBBP07437 444 aa5.06□□□□□ -1.6
SDCBP-213ENST00000630925 HOXD8P13378 290 aaPredicted RBP5.06□□□□□ -1.6
SDCBP-213ENST00000630925 PTPRAP18433 802 aa5.06□□□□□ -1.6
SDCBP-213ENST00000630925 FSHRP23945 695 aa5.06□□□□□ -1.6
SDCBP-213ENST00000630925 BMI1P35226 326 aa5.06□□□□□ -1.6
SDCBP-213ENST00000630925 GGT5P36269 586 aa5.06□□□□□ -1.6
SDCBP-213ENST00000630925 NPY4RP50391 375 aa5.06□□□□□ -1.6
SDCBP-213ENST00000630925 GTF2A1P52655 376 aaPredicted RBP5.06□□□□□ -1.6
SDCBP-213ENST00000630925 SLC5A3P53794 718 aa5.06□□□□□ -1.6
SDCBP-213ENST00000630925 PRRX1P54821 245 aa5.06□□□□□ -1.6
SDCBP-213ENST00000630925 SLC8A3P57103 927 aa5.06□□□□□ -1.6
SDCBP-213ENST00000630925 TUBB4BP68371 445 aa5.06□□□□□ -1.6
SDCBP-213ENST00000630925 NOP14P78316 857 aaKnown RBP5.06□□□□□ -1.6
SDCBP-213ENST00000630925 ABATP80404 500 aa5.06□□□□□ -1.6
SDCBP-213ENST00000630925 BASP1P80723 227 aaKnown RBP5.06□□□□□ -1.6
SDCBP-213ENST00000630925 MRPS15P82914 257 aaKnown RBP5.06□□□□□ -1.6
SDCBP-213ENST00000630925 PTK6Q13882 451 aa5.06□□□□□ -1.6
SDCBP-213ENST00000630925 KCNC3Q14003 757 aa5.06□□□□□ -1.6
SDCBP-213ENST00000630925 R3HDM1Q15032 1099 aaKnown RBP5.06□□□□□ -1.6
SDCBP-213ENST00000630925 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.06□□□□□ -1.6
SDCBP-213ENST00000630925 SLC5A9Q2M3M2 681 aa5.06□□□□□ -1.6
SDCBP-213ENST00000630925 C9orf152Q5JTZ5 239 aa5.06□□□□□ -1.6
SDCBP-213ENST00000630925 FAM69AQ5T7M9 428 aa5.06□□□□□ -1.6
SDCBP-213ENST00000630925 MAP1SQ66K74 1059 aaPredicted RBP5.06□□□□□ -1.6
SDCBP-213ENST00000630925 KRT80Q6KB66 452 aa5.06□□□□□ -1.6
SDCBP-213ENST00000630925 TIGD7Q6NT04 549 aaPredicted RBP5.06□□□□□ -1.6
SDCBP-213ENST00000630925 ESRP1Q6NXG1 681 aaKnown RBP5.06□□□□□ -1.6
SDCBP-213ENST00000630925 TMEM270Q6UE05 265 aa5.06□□□□□ -1.6
SDCBP-213ENST00000630925 SEZ6L2Q6UXD5 910 aa5.06□□□□□ -1.6
SDCBP-213ENST00000630925 GRAMD2AQ8IUY3 354 aa5.06□□□□□ -1.6
SDCBP-213ENST00000630925 PHC2Q8IXK0 858 aa5.06□□□□□ -1.6
SDCBP-213ENST00000630925 ZNF565Q8N9K5 539 aa5.06□□□□□ -1.6
SDCBP-213ENST00000630925 XXYLT1Q8NBI6 393 aa5.06□□□□□ -1.6
SDCBP-213ENST00000630925 HUS1BQ8NHY5 278 aa5.06□□□□□ -1.6
SDCBP-213ENST00000630925 ASAP3Q8TDY4 903 aa5.06□□□□□ -1.6
SDCBP-213ENST00000630925 PERPQ96FX8 193 aa5.06□□□□□ -1.6
SDCBP-213ENST00000630925 HNRNPABQ99729 332 aaKnown RBP5.06□□□□□ -1.6
SDCBP-213ENST00000630925 ADAM7Q9H2U9 754 aa5.06□□□□□ -1.6
SDCBP-213ENST00000630925 COQ10BQ9H8M1 238 aa5.06□□□□□ -1.6
SDCBP-213ENST00000630925 RXFP1Q9HBX9 757 aa5.06□□□□□ -1.6
SDCBP-213ENST00000630925 TMOD3Q9NYL9 352 aa5.06□□□□□ -1.6
SDCBP-213ENST00000630925 TAS2R10Q9NYW0 307 aa5.06□□□□□ -1.6
SDCBP-213ENST00000630925 PLA2G3Q9NZ20 509 aa5.06□□□□□ -1.6
SDCBP-213ENST00000630925 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.06□□□□□ -1.6
SDCBP-213ENST00000630925 VPS18Q9P253 973 aa5.06□□□□□ -1.6
SDCBP-213ENST00000630925 ITGA11Q9UKX5 1188 aa5.06□□□□□ -1.6
SDCBP-213ENST00000630925 TRPV2Q9Y5S1 764 aa5.06□□□□□ -1.6
SDCBP-213ENST00000630925 COMMD3-BMI1R4GMX3 469 aa5.06□□□□□ -1.6
SDCBP-213ENST00000630925 PZPP20742 1482 aa5.06□□□□□ -1.6
SDCBP-213ENST00000630925 ABCC3O15438 1527 aa5.06□□□□□ -1.6
SDCBP-213ENST00000630925 DENND3A2RUS2 1198 aa5.06□□□□□ -1.6
SDCBP-213ENST00000630925 TULP2O00295 520 aa5.06□□□□□ -1.6
SDCBP-213ENST00000630925 C2CD2LO14523 706 aa5.06□□□□□ -1.6
SDCBP-213ENST00000630925 EXTL3O43909 919 aa5.06□□□□□ -1.6
SDCBP-213ENST00000630925 KRT37O76014 449 aa5.06□□□□□ -1.6
SDCBP-213ENST00000630925 ONECUT2O95948 504 aa5.06□□□□□ -1.6
SDCBP-213ENST00000630925 ITGBL1O95965 494 aaPredicted RBP5.06□□□□□ -1.6
SDCBP-213ENST00000630925 PDGFBP01127 241 aaPredicted RBP5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms