RNA–Protein interactions for RNA: ENST00000621016.4

CDH1-214, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-214ENST00000621016 EIF2AQ9BY44 585 aaKnown RBP11.05□□□□□ -0.64
CDH1-214ENST00000621016 ELOVL4Q9GZR5 314 aa11.05□□□□□ -0.64
CDH1-214ENST00000621016 CXCL16Q9H2A7 254 aa11.05□□□□□ -0.64
CDH1-214ENST00000621016 SEPT10Q9P0V9 454 aa11.05□□□□□ -0.64
CDH1-214ENST00000621016 CCDC78A2IDD5 438 aa11.04□□□□□ -0.64
CDH1-214ENST00000621016 SPECC1L-ADORA2AF8WAN1 911 aa11.04□□□□□ -0.64
CDH1-214ENST00000621016 HMGCRP04035 888 aa11.04□□□□□ -0.64
CDH1-214ENST00000621016 HOXC6P09630 235 aa11.04□□□□□ -0.64
CDH1-214ENST00000621016 STAG3L1P0CL83 205 aa11.04□□□□□ -0.64
CDH1-214ENST00000621016 RBL1P28749 1068 aa11.04□□□□□ -0.64
CDH1-214ENST00000621016 GRIA1P42261 906 aa11.04□□□□□ -0.64
CDH1-214ENST00000621016 CLDN10P78369 228 aa11.04□□□□□ -0.64
CDH1-214ENST00000621016 ROR1Q01973 937 aa11.04□□□□□ -0.64
CDH1-214ENST00000621016 PTPN11Q06124 597 aaPredicted RBP11.04□□□□□ -0.64
CDH1-214ENST00000621016 THOC5Q13769 683 aaKnown RBP11.04□□□□□ -0.64
CDH1-214ENST00000621016 INAQ16352 499 aa11.04□□□□□ -0.64
CDH1-214ENST00000621016 PDK4Q16654 411 aa11.04□□□□□ -0.64
CDH1-214ENST00000621016 CTC1Q2NKJ3 1217 aa11.04□□□□□ -0.64
CDH1-214ENST00000621016 OSTM1Q86WC4 334 aa11.04□□□□□ -0.64
CDH1-214ENST00000621016 ARHGAP24Q8N264 748 aa11.04□□□□□ -0.64
CDH1-214ENST00000621016 NLRP7Q8WX94 980 aa11.04□□□□□ -0.64
CDH1-214ENST00000621016 NDRG1Q92597 394 aaKnown RBP11.04□□□□□ -0.64
CDH1-214ENST00000621016 USP6NLQ92738 828 aa11.04□□□□□ -0.64
CDH1-214ENST00000621016 PEBP4Q96S96 227 aa11.04□□□□□ -0.64
CDH1-214ENST00000621016 ZNF184Q99676 751 aaPredicted RBP11.04□□□□□ -0.64
CDH1-214ENST00000621016 GRIP2Q9C0E4 1043 aa11.04□□□□□ -0.64
CDH1-214ENST00000621016 FAM49AQ9H0Q0 323 aaPredicted RBP11.04□□□□□ -0.64
CDH1-214ENST00000621016 CCDC68Q9H2F9 335 aa11.04□□□□□ -0.64
CDH1-214ENST00000621016 PCDHGA3Q9Y5H0 932 aa11.04□□□□□ -0.64
CDH1-214ENST00000621016 SNX9Q9Y5X1 595 aa11.04□□□□□ -0.64
CDH1-214ENST00000621016 ADGRA2Q96PE1 1338 aa11.04□□□□□ -0.64
CDH1-214ENST00000621016 PCP4L1A6NKN8 68 aa11.04□□□□□ -0.64
CDH1-214ENST00000621016 ZNF286BP0CG31 522 aa11.04□□□□□ -0.64
CDH1-214ENST00000621016 TFE3P19532 575 aaPredicted RBP11.04□□□□□ -0.64
CDH1-214ENST00000621016 NDST1P52848 882 aa11.04□□□□□ -0.64
CDH1-214ENST00000621016 CLPPQ16740 277 aaPredicted RBP11.04□□□□□ -0.64
CDH1-214ENST00000621016 MAP1SQ66K74 1059 aaPredicted RBP11.04□□□□□ -0.64
CDH1-214ENST00000621016 PPP1R14CQ8TAE6 165 aa11.04□□□□□ -0.64
CDH1-214ENST00000621016 SLC35B2Q8TB61 432 aa11.04□□□□□ -0.64
CDH1-214ENST00000621016 PIP4K2CQ8TBX8 421 aa11.04□□□□□ -0.64
CDH1-214ENST00000621016 AGR3Q8TD06 166 aa11.04□□□□□ -0.64
CDH1-214ENST00000621016 LZICQ8WZA0 190 aa11.04□□□□□ -0.64
CDH1-214ENST00000621016 HPDLQ96IR7 371 aa11.04□□□□□ -0.64
CDH1-214ENST00000621016 KLHL4Q9C0H6 718 aa11.04□□□□□ -0.64
CDH1-214ENST00000621016 XYLT2Q9H1B5 865 aa11.04□□□□□ -0.64
CDH1-214ENST00000621016 ACSS2Q9NR19 701 aa11.04□□□□□ -0.64
CDH1-214ENST00000621016 KRT82Q9NSB4 513 aa11.04□□□□□ -0.64
CDH1-214ENST00000621016 DDX56Q9NY93 547 aaKnown RBP11.04□□□□□ -0.64
CDH1-214ENST00000621016 ARIH1Q9Y4X5 557 aaPredicted RBP11.04□□□□□ -0.64
CDH1-214ENST00000621016 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.04□□□□□ -0.64
CDH1-214ENST00000621016 MYO18AQ92614 2054 aaKnown RBP11.04□□□□□ -0.64
CDH1-214ENST00000621016 SIGLEC16A6NMB1 481 aa11.04□□□□□ -0.64
CDH1-214ENST00000621016 CXorf49A8MYA2 514 aaPredicted RBP11.04□□□□□ -0.64
CDH1-214ENST00000621016 ADM5C9JUS6 153 aa11.04□□□□□ -0.64
CDH1-214ENST00000621016 MAFO75444 373 aaPredicted RBP11.04□□□□□ -0.64
CDH1-214ENST00000621016 ZBED1O96006 694 aa11.04□□□□□ -0.64
CDH1-214ENST00000621016 APOEP02649 317 aa11.04□□□□□ -0.64
CDH1-214ENST00000621016 ITGAVP06756 1048 aa11.04□□□□□ -0.64
CDH1-214ENST00000621016 NR4A1P22736 598 aa11.04□□□□□ -0.64
CDH1-214ENST00000621016 BCAR1P56945 870 aa11.04□□□□□ -0.64
CDH1-214ENST00000621016 TMPRSS15P98073 1019 aa11.04□□□□□ -0.64
CDH1-214ENST00000621016 SULT2A1Q06520 285 aa11.04□□□□□ -0.64
CDH1-214ENST00000621016 CA9Q16790 459 aa11.04□□□□□ -0.64
CDH1-214ENST00000621016 Q3C1V9 767 aa11.04□□□□□ -0.64
CDH1-214ENST00000621016 CES3Q6UWW8 571 aa11.04□□□□□ -0.64
CDH1-214ENST00000621016 CDHR3Q6ZTQ4 885 aa11.04□□□□□ -0.64
CDH1-214ENST00000621016 ALYREFQ86V81 257 aaKnown RBP11.04□□□□□ -0.64
CDH1-214ENST00000621016 XYLT1Q86Y38 959 aa11.04□□□□□ -0.64
CDH1-214ENST00000621016 GALNT4Q8N4A0 578 aa11.04□□□□□ -0.64
CDH1-214ENST00000621016 HIPK4Q8NE63 616 aa11.04□□□□□ -0.64
CDH1-214ENST00000621016 DENND1AQ8TEH3 1009 aa11.04□□□□□ -0.64
CDH1-214ENST00000621016 CAMKK2Q96RR4 588 aa11.04□□□□□ -0.64
CDH1-214ENST00000621016 CDT1Q9H211 546 aa11.04□□□□□ -0.64
CDH1-214ENST00000621016 EBF3Q9H4W6 596 aa11.04□□□□□ -0.64
CDH1-214ENST00000621016 ARL8BQ9NVJ2 186 aa11.04□□□□□ -0.64
CDH1-214ENST00000621016 CIDEBQ9UHD4 219 aa11.04□□□□□ -0.64
CDH1-214ENST00000621016 SIX4Q9UIU6 781 aa11.04□□□□□ -0.64
CDH1-214ENST00000621016 CPSF3Q9UKF6 684 aaKnown RBP11.04□□□□□ -0.64
CDH1-214ENST00000621016 SMG5Q9UPR3 1016 aaKnown RBP11.04□□□□□ -0.64
CDH1-214ENST00000621016 SHOC2Q9UQ13 582 aa11.04□□□□□ -0.64
CDH1-214ENST00000621016 GPSM3Q9Y4H4 160 aa11.04□□□□□ -0.64
CDH1-214ENST00000621016 STYXL1Q9Y6J8 313 aa11.04□□□□□ -0.64
CDH1-214ENST00000621016 MYH9P35579 1960 aaKnown RBP11.04□□□□□ -0.64
CDH1-214ENST00000621016 IQCA1LA6NCM1 817 aa11.03□□□□□ -0.64
CDH1-214ENST00000621016 GYG2O15488 501 aa11.03□□□□□ -0.64
CDH1-214ENST00000621016 ENO1P06733 434 aaKnown RBP11.03□□□□□ -0.64
CDH1-214ENST00000621016 MYL2P10916 166 aa11.03□□□□□ -0.64
CDH1-214ENST00000621016 EFNA5P52803 228 aa11.03□□□□□ -0.64
CDH1-214ENST00000621016 ZNF200P98182 395 aaPredicted RBP11.03□□□□□ -0.64
CDH1-214ENST00000621016 SLC25A11Q02978 314 aaKnown RBP11.03□□□□□ -0.64
CDH1-214ENST00000621016 MPZL3Q6UWV2 235 aa11.03□□□□□ -0.64
CDH1-214ENST00000621016 TRIM55Q9BYV6 548 aa11.03□□□□□ -0.64
CDH1-214ENST00000621016 SPATC1LQ9H0A9 340 aa11.03□□□□□ -0.64
CDH1-214ENST00000621016 DHX35Q9H5Z1 703 aaKnown RBP11.03□□□□□ -0.64
CDH1-214ENST00000621016 SIAEQ9HAT2 523 aa11.03□□□□□ -0.64
CDH1-214ENST00000621016 TUBA8Q9NY65 449 aaPredicted RBP11.03□□□□□ -0.64
CDH1-214ENST00000621016 HACD3Q9P035 362 aa11.03□□□□□ -0.64
CDH1-214ENST00000621016 PPARGC1AQ9UBK2 798 aaKnown RBP11.03□□□□□ -0.64
CDH1-214ENST00000621016 ZC3H7BQ9UGR2 993 aaKnown RBP11.03□□□□□ -0.64
CDH1-214ENST00000621016 FAM32AQ9Y421 112 aaKnown RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms