RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 ALDH1A2O94788 518 aa7.35□□□□□ -1.23
COLCA1-205ENST00000620864 GUCY1A2P33402 732 aa7.35□□□□□ -1.23
COLCA1-205ENST00000620864 ITGA8P53708 1063 aa7.35□□□□□ -1.23
COLCA1-205ENST00000620864 CACNB2Q08289 660 aaPredicted RBP7.35□□□□□ -1.23
COLCA1-205ENST00000620864 ARHGEF7Q14155 803 aa7.35□□□□□ -1.23
COLCA1-205ENST00000620864 SLC29A2Q14542 456 aa7.35□□□□□ -1.23
COLCA1-205ENST00000620864 LAYNQ6UX15 382 aa7.35□□□□□ -1.23
COLCA1-205ENST00000620864 TMEM179Q6ZVK1 233 aa7.35□□□□□ -1.23
COLCA1-205ENST00000620864 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.35□□□□□ -1.23
COLCA1-205ENST00000620864 TRIM48Q8IWZ4 208 aa7.35□□□□□ -1.23
COLCA1-205ENST00000620864 ADSSL1Q8N142 457 aa7.35□□□□□ -1.23
COLCA1-205ENST00000620864 WFS1O76024 890 aa7.35□□□□□ -1.23
COLCA1-205ENST00000620864 ME2P23368 584 aa7.35□□□□□ -1.23
COLCA1-205ENST00000620864 COILP38432 576 aaPredicted RBP7.35□□□□□ -1.23
COLCA1-205ENST00000620864 SMIM11AP58511 58 aa7.35□□□□□ -1.23
COLCA1-205ENST00000620864 ITPK1Q13572 414 aa7.35□□□□□ -1.23
COLCA1-205ENST00000620864 PTGES3Q15185 160 aaKnown RBP7.35□□□□□ -1.23
COLCA1-205ENST00000620864 PDPK2PQ6A1A2 396 aa7.35□□□□□ -1.23
COLCA1-205ENST00000620864 ARRDC4Q8NCT1 418 aa7.35□□□□□ -1.23
COLCA1-205ENST00000620864 DEFB129Q9H1M3 183 aa7.35□□□□□ -1.23
COLCA1-205ENST00000620864 STN1Q9H668 368 aaKnown RBP7.35□□□□□ -1.23
COLCA1-205ENST00000620864 PCSK1NQ9UHG2 260 aa7.35□□□□□ -1.23
COLCA1-205ENST00000620864 LSM7Q9UK45 103 aaKnown RBP7.35□□□□□ -1.23
COLCA1-205ENST00000620864 C2CD2Q9Y426 696 aa7.35□□□□□ -1.23
COLCA1-205ENST00000620864 NCAPD2Q15021 1401 aa7.34□□□□□ -1.23
COLCA1-205ENST00000620864 MBD5Q9P267 1494 aa7.34□□□□□ -1.23
COLCA1-205ENST00000620864 TRAPPC3O43617 180 aa7.34□□□□□ -1.23
COLCA1-205ENST00000620864 PTGS2P35354 604 aa7.34□□□□□ -1.23
COLCA1-205ENST00000620864 SKIV2L2P42285 1042 aaKnown RBP7.34□□□□□ -1.23
COLCA1-205ENST00000620864 BST2Q10589 180 aaKnown RBP7.34□□□□□ -1.23
COLCA1-205ENST00000620864 CDH18Q13634 790 aa7.34□□□□□ -1.23
COLCA1-205ENST00000620864 SWI5Q1ZZU3 235 aa7.34□□□□□ -1.23
COLCA1-205ENST00000620864 HECTD3Q5T447 861 aa7.34□□□□□ -1.23
COLCA1-205ENST00000620864 SPAG16Q8N0X2 631 aa7.34□□□□□ -1.23
COLCA1-205ENST00000620864 TDRD5Q8NAT2 981 aaKnown RBP7.34□□□□□ -1.23
COLCA1-205ENST00000620864 GPRC5AQ8NFJ5 357 aa7.34□□□□□ -1.23
COLCA1-205ENST00000620864 PROX1Q92786 737 aa7.34□□□□□ -1.23
COLCA1-205ENST00000620864 KLHL32Q96NJ5 620 aa7.34□□□□□ -1.23
COLCA1-205ENST00000620864 PPP1R10Q96QC0 940 aaKnown RBP7.34□□□□□ -1.23
COLCA1-205ENST00000620864 PNPLA3Q9NST1 481 aa7.34□□□□□ -1.23
COLCA1-205ENST00000620864 SYNMO15061 1565 aa7.34□□□□□ -1.23
COLCA1-205ENST00000620864 ALKQ9UM73 1620 aa7.34□□□□□ -1.23
COLCA1-205ENST00000620864 ZSCAN5CA6NGD5 496 aaPredicted RBP7.34□□□□□ -1.23
COLCA1-205ENST00000620864 VPS26AO75436 327 aa7.34□□□□□ -1.23
COLCA1-205ENST00000620864 SLC2A3P11169 496 aa7.34□□□□□ -1.23
COLCA1-205ENST00000620864 RPS6KA3P51812 740 aa7.34□□□□□ -1.23
COLCA1-205ENST00000620864 OTOAQ7RTW8 1153 aa7.34□□□□□ -1.23
COLCA1-205ENST00000620864 OOSP2Q86WS3 158 aa7.34□□□□□ -1.23
COLCA1-205ENST00000620864 FAM120BQ96EK7 910 aaKnown RBP7.34□□□□□ -1.23
COLCA1-205ENST00000620864 RBM12Q9NTZ6 932 aaKnown RBP7.34□□□□□ -1.23
COLCA1-205ENST00000620864 CMTM6Q9NX76 183 aa7.34□□□□□ -1.23
COLCA1-205ENST00000620864 WWOXQ9NZC7 414 aa7.34□□□□□ -1.23
COLCA1-205ENST00000620864 ZNF70Q9UC06 446 aaPredicted RBP7.34□□□□□ -1.23
COLCA1-205ENST00000620864 CDH9Q9ULB4 789 aa7.34□□□□□ -1.23
COLCA1-205ENST00000620864 WDR37Q9Y2I8 494 aa7.34□□□□□ -1.23
COLCA1-205ENST00000620864 MANSC4A6NHS7 340 aaPredicted RBP7.34□□□□□ -1.23
COLCA1-205ENST00000620864 IL18RAPO95256 599 aa7.34□□□□□ -1.23
COLCA1-205ENST00000620864 UQCRBP14927 111 aa7.34□□□□□ -1.23
COLCA1-205ENST00000620864 H2AFXP16104 143 aaPredicted RBP7.34□□□□□ -1.23
COLCA1-205ENST00000620864 ZNF12P17014 697 aa7.34□□□□□ -1.23
COLCA1-205ENST00000620864 ATP6V1C1P21283 382 aa7.34□□□□□ -1.23
COLCA1-205ENST00000620864 VAC14Q08AM6 782 aa7.34□□□□□ -1.23
COLCA1-205ENST00000620864 ZMYND11Q15326 602 aa7.34□□□□□ -1.23
COLCA1-205ENST00000620864 ZFP69Q49AA0 526 aa7.34□□□□□ -1.23
COLCA1-205ENST00000620864 TRIM74Q86UV6 250 aa7.34□□□□□ -1.23
COLCA1-205ENST00000620864 TRIM73Q86UV7 250 aa7.34□□□□□ -1.23
COLCA1-205ENST00000620864 ZNF671Q8TAW3 534 aa7.34□□□□□ -1.23
COLCA1-205ENST00000620864 SPATA18Q8TC71 538 aa7.34□□□□□ -1.23
COLCA1-205ENST00000620864 ACTRT1Q8TDG2 376 aa7.34□□□□□ -1.23
COLCA1-205ENST00000620864 SLC9A7Q96T83 725 aa7.34□□□□□ -1.23
COLCA1-205ENST00000620864 OSBPL11Q9BXB4 747 aa7.34□□□□□ -1.23
COLCA1-205ENST00000620864 WDR41Q9HAD4 459 aa7.34□□□□□ -1.23
COLCA1-205ENST00000620864 CHMP1AQ9HD42 196 aaPredicted RBP7.34□□□□□ -1.23
COLCA1-205ENST00000620864 MLXQ9UH92 298 aa7.34□□□□□ -1.23
COLCA1-205ENST00000620864 FEM1BQ9UK73 627 aa7.34□□□□□ -1.23
COLCA1-205ENST00000620864 CACNA1FO60840 1977 aa7.34□□□□□ -1.23
COLCA1-205ENST00000620864 P4HBP07237 508 aaKnown RBP7.34□□□□□ -1.23
COLCA1-205ENST00000620864 DNAJB2P25686 324 aa7.34□□□□□ -1.23
COLCA1-205ENST00000620864 NR1I3Q14994 352 aa7.34□□□□□ -1.23
COLCA1-205ENST00000620864 RABL6Q3YEC7 729 aaPredicted RBP7.34□□□□□ -1.23
COLCA1-205ENST00000620864 COBLL1Q53SF7 1204 aa7.34□□□□□ -1.23
COLCA1-205ENST00000620864 SFRP1Q8N474 314 aa7.34□□□□□ -1.23
COLCA1-205ENST00000620864 MSL3Q8N5Y2 521 aaKnown RBP7.34□□□□□ -1.23
COLCA1-205ENST00000620864 UXS1Q8NBZ7 420 aa7.34□□□□□ -1.23
COLCA1-205ENST00000620864 TSPAN14Q8NG11 270 aa7.34□□□□□ -1.23
COLCA1-205ENST00000620864 TP53INP1Q96A56 240 aa7.34□□□□□ -1.23
COLCA1-205ENST00000620864 CLCC1Q96S66 551 aa7.34□□□□□ -1.23
COLCA1-205ENST00000620864 TMEM120AQ9BXJ8 343 aa7.34□□□□□ -1.23
COLCA1-205ENST00000620864 DDX18Q9NVP1 670 aaKnown RBP7.34□□□□□ -1.23
COLCA1-205ENST00000620864 THAP1Q9NVV9 213 aa7.34□□□□□ -1.23
COLCA1-205ENST00000620864 TMEM216Q9P0N5 145 aa7.34□□□□□ -1.23
COLCA1-205ENST00000620864 ZNF221Q9UK13 617 aa7.34□□□□□ -1.23
COLCA1-205ENST00000620864 CROTQ9UKG9 612 aa7.34□□□□□ -1.23
COLCA1-205ENST00000620864 ABCA9Q8IUA7 1624 aa7.34□□□□□ -1.23
COLCA1-205ENST00000620864 LINC00854A0A1B0GVQ3 168 aa7.34□□□□□ -1.23
COLCA1-205ENST00000620864 OR14I1A6ND48 311 aa7.34□□□□□ -1.23
COLCA1-205ENST00000620864 ASB14A6NK59 587 aa7.34□□□□□ -1.23
COLCA1-205ENST00000620864 ZNF879B4DU55 563 aa7.34□□□□□ -1.23
COLCA1-205ENST00000620864 KPNA6O60684 536 aa7.34□□□□□ -1.23
COLCA1-205ENST00000620864 MSL3P1P0C860 447 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms