RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 REEP1Q9H902 201 aa15.38■□□□□ 0.05
COL5A1-208ENST00000618395 ALDH3A2P51648 485 aa15.38■□□□□ 0.05
COL5A1-208ENST00000618395 PRR5LQ6MZQ0 368 aa15.38■□□□□ 0.05
COL5A1-208ENST00000618395 PAGE2Q7Z2X7 111 aa15.38■□□□□ 0.05
COL5A1-208ENST00000618395 TNIP3Q96KP6 325 aa15.38■□□□□ 0.05
COL5A1-208ENST00000618395 NAT9Q9BTE0 207 aa15.38■□□□□ 0.05
COL5A1-208ENST00000618395 FRMD8P1Q9BZ68 369 aaPredicted RBP15.38■□□□□ 0.05
COL5A1-208ENST00000618395 PNMA8BQ9ULN7 279 aaPredicted RBP15.38■□□□□ 0.05
COL5A1-208ENST00000618395 ZNF451Q9Y4E5 1061 aa15.38■□□□□ 0.05
COL5A1-208ENST00000618395 ZSCAN5CA6NGD5 496 aaPredicted RBP15.38■□□□□ 0.05
COL5A1-208ENST00000618395 NEURL1BA8MQ27 555 aa15.38■□□□□ 0.05
COL5A1-208ENST00000618395 PTPN1P18031 435 aaKnown RBP15.38■□□□□ 0.05
COL5A1-208ENST00000618395 C12orf56Q8IXR9 622 aa15.38■□□□□ 0.05
COL5A1-208ENST00000618395 ZSCAN5AQ9BUG6 496 aa15.38■□□□□ 0.05
COL5A1-208ENST00000618395 ORC5O43913 435 aa15.37■□□□□ 0.05
COL5A1-208ENST00000618395 ZNF844Q08AG5 666 aa15.37■□□□□ 0.05
COL5A1-208ENST00000618395 GARNL3Q5VVW2 1013 aa15.37■□□□□ 0.05
COL5A1-208ENST00000618395 ANKS6Q68DC2 871 aa15.37■□□□□ 0.05
COL5A1-208ENST00000618395 ZNF615Q8N8J6 731 aa15.37■□□□□ 0.05
COL5A1-208ENST00000618395 STARD7Q9NQZ5 370 aa15.37■□□□□ 0.05
COL5A1-208ENST00000618395 COMTP21964 271 aa15.37■□□□□ 0.05
COL5A1-208ENST00000618395 TNFAIP1Q13829 316 aa15.37■□□□□ 0.05
COL5A1-208ENST00000618395 NPATQ14207 1427 aa15.37■□□□□ 0.05
COL5A1-208ENST00000618395 METTL18O95568 372 aa15.37■□□□□ 0.05
COL5A1-208ENST00000618395 TNK2Q07912 1038 aa15.37■□□□□ 0.05
COL5A1-208ENST00000618395 RIPPLY1Q0D2K3 151 aa15.37■□□□□ 0.05
COL5A1-208ENST00000618395 IDI1Q13907 227 aa15.37■□□□□ 0.05
COL5A1-208ENST00000618395 CXXC5Q7LFL8 322 aaKnown RBP15.37■□□□□ 0.05
COL5A1-208ENST00000618395 ZNF75CPQ92670 426 aaPredicted RBP15.37■□□□□ 0.05
COL5A1-208ENST00000618395 CAMKK2Q96RR4 588 aa15.37■□□□□ 0.05
COL5A1-208ENST00000618395 ANAPC2Q9UJX6 822 aa15.37■□□□□ 0.05
COL5A1-208ENST00000618395 AP4B1Q9Y6B7 739 aa15.37■□□□□ 0.05
COL5A1-208ENST00000618395 UMODL1Q5DID0 1318 aa15.37■□□□□ 0.05
COL5A1-208ENST00000618395 FDPSP14324 419 aaKnown RBP15.37■□□□□ 0.05
COL5A1-208ENST00000618395 RIPK1Q13546 671 aa15.37■□□□□ 0.05
COL5A1-208ENST00000618395 ABCB5Q2M3G0 1257 aa15.37■□□□□ 0.05
COL5A1-208ENST00000618395 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.37■□□□□ 0.05
COL5A1-208ENST00000618395 ZFYVE28Q9HCC9 887 aa15.37■□□□□ 0.05
COL5A1-208ENST00000618395 HPF1Q9NWY4 346 aa15.37■□□□□ 0.05
COL5A1-208ENST00000618395 GARTP22102 1010 aa15.37■□□□□ 0.05
COL5A1-208ENST00000618395 PPP2R1BP30154 601 aa15.37■□□□□ 0.05
COL5A1-208ENST00000618395 FRG1Q14331 258 aaKnown RBP15.37■□□□□ 0.05
COL5A1-208ENST00000618395 ZNF276Q8N554 614 aa15.37■□□□□ 0.05
COL5A1-208ENST00000618395 SLC30A5Q8TAD4 765 aa15.37■□□□□ 0.05
COL5A1-208ENST00000618395 PIK3R3Q92569 461 aa15.37■□□□□ 0.05
COL5A1-208ENST00000618395 MCEEQ96PE7 176 aa15.37■□□□□ 0.05
COL5A1-208ENST00000618395 PAFAH2Q99487 392 aa15.37■□□□□ 0.05
COL5A1-208ENST00000618395 CCNB1IP1Q9NPC3 277 aa15.37■□□□□ 0.05
COL5A1-208ENST00000618395 MYO5CQ9NQX4 1742 aa15.37■□□□□ 0.05
COL5A1-208ENST00000618395 STIP1P31948 543 aaKnown RBP15.37■□□□□ 0.05
COL5A1-208ENST00000618395 PRKAA2P54646 552 aa15.37■□□□□ 0.05
COL5A1-208ENST00000618395 ZCCHC8Q6NZY4 707 aaKnown RBP15.37■□□□□ 0.05
COL5A1-208ENST00000618395 POU5F2Q8N7G0 328 aa15.37■□□□□ 0.05
COL5A1-208ENST00000618395 DCXO43602 365 aa15.37■□□□□ 0.05
COL5A1-208ENST00000618395 ACAT1P24752 427 aaKnown RBP15.37■□□□□ 0.05
COL5A1-208ENST00000618395 MYL9P24844 172 aa15.37■□□□□ 0.05
COL5A1-208ENST00000618395 PAGE2BQ5JRK9 111 aa15.37■□□□□ 0.05
COL5A1-208ENST00000618395 PPP1R15BQ5SWA1 713 aa15.37■□□□□ 0.05
COL5A1-208ENST00000618395 NACC2Q96BF6 587 aa15.37■□□□□ 0.05
COL5A1-208ENST00000618395 RAB26Q9ULW5 256 aa15.37■□□□□ 0.05
COL5A1-208ENST00000618395 POFUT2Q9Y2G5 429 aa15.37■□□□□ 0.05
COL5A1-208ENST00000618395 CSADQ9Y600 493 aa15.37■□□□□ 0.05
COL5A1-208ENST00000618395 PGRMC2O15173 223 aa15.36■□□□□ 0.05
COL5A1-208ENST00000618395 DPYSQ14117 519 aa15.36■□□□□ 0.05
COL5A1-208ENST00000618395 NECTIN1Q15223 517 aa15.36■□□□□ 0.05
COL5A1-208ENST00000618395 CYP4V2Q6ZWL3 525 aaPredicted RBP15.36■□□□□ 0.05
COL5A1-208ENST00000618395 ZBTB46Q86UZ6 589 aa15.36■□□□□ 0.05
COL5A1-208ENST00000618395 VPS45Q9NRW7 570 aa15.36■□□□□ 0.05
COL5A1-208ENST00000618395 TOR4AQ9NXH8 423 aa15.36■□□□□ 0.05
COL5A1-208ENST00000618395 LGR5O75473 907 aa15.36■□□□□ 0.05
COL5A1-208ENST00000618395 SERPINF2P08697 491 aa15.36■□□□□ 0.05
COL5A1-208ENST00000618395 G3V2T6 193 aa15.36■□□□□ 0.05
COL5A1-208ENST00000618395 H3BM21 787 aa15.36■□□□□ 0.05
COL5A1-208ENST00000618395 GRK3P35626 688 aa15.36■□□□□ 0.05
COL5A1-208ENST00000618395 HIRAP54198 1017 aaPredicted RBP15.36■□□□□ 0.05
COL5A1-208ENST00000618395 CYP4F2P78329 520 aa15.36■□□□□ 0.05
COL5A1-208ENST00000618395 CYP4F3Q08477 520 aa15.36■□□□□ 0.05
COL5A1-208ENST00000618395 CNPY1Q3B7I2 92 aa15.36■□□□□ 0.05
COL5A1-208ENST00000618395 ZNF790Q6PG37 636 aa15.36■□□□□ 0.05
COL5A1-208ENST00000618395 KDELC2Q7Z4H8 507 aa15.36■□□□□ 0.05
COL5A1-208ENST00000618395 CCNJLQ8IV13 435 aa15.36■□□□□ 0.05
COL5A1-208ENST00000618395 ATPAF2Q8N5M1 289 aa15.36■□□□□ 0.05
COL5A1-208ENST00000618395 GFM1Q96RP9 751 aaKnown RBP15.36■□□□□ 0.05
COL5A1-208ENST00000618395 ALG6Q9Y672 507 aa15.36■□□□□ 0.05
COL5A1-208ENST00000618395 IQCMA0A1B0GVH7 501 aa15.36■□□□□ 0.05
COL5A1-208ENST00000618395 AKAP8O43823 692 aaKnown RBP15.36■□□□□ 0.05
COL5A1-208ENST00000618395 KCNA10Q16322 511 aa15.36■□□□□ 0.05
COL5A1-208ENST00000618395 DCAF4L1Q3SXM0 396 aa15.36■□□□□ 0.05
COL5A1-208ENST00000618395 STOX1Q6ZVD7 989 aa15.36■□□□□ 0.05
COL5A1-208ENST00000618395 TMC3Q7Z5M5 1100 aa15.36■□□□□ 0.05
COL5A1-208ENST00000618395 DEPDC4Q8N2C3 294 aa15.36■□□□□ 0.05
COL5A1-208ENST00000618395 PTCD3Q96EY7 689 aaKnown RBP15.36■□□□□ 0.05
COL5A1-208ENST00000618395 AIFM3Q96NN9 605 aa15.36■□□□□ 0.05
COL5A1-208ENST00000618395 KCTD10Q9H3F6 313 aa15.36■□□□□ 0.05
COL5A1-208ENST00000618395 NAALADL1Q9UQQ1 740 aa15.36■□□□□ 0.05
COL5A1-208ENST00000618395 AP3M1Q9Y2T2 418 aa15.36■□□□□ 0.05
COL5A1-208ENST00000618395 RECQL5O94762 991 aaPredicted RBP15.36■□□□□ 0.05
COL5A1-208ENST00000618395 NTRK1P04629 796 aa15.36■□□□□ 0.05
COL5A1-208ENST00000618395 UCHL3P15374 230 aa15.36■□□□□ 0.05
COL5A1-208ENST00000618395 S100GP29377 79 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms