RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 TTC8Q8TAM2 541 aa10.99□□□□□ -0.65
LIG1-210ENST00000596332 SLC35G2Q8TBE7 412 aa10.99□□□□□ -0.65
LIG1-210ENST00000596332 FNIP1Q8TF40 1166 aa10.99□□□□□ -0.65
LIG1-210ENST00000596332 EZH1Q92800 747 aaPredicted RBP10.99□□□□□ -0.65
LIG1-210ENST00000596332 SERPINB11Q96P15 392 aa10.99□□□□□ -0.65
LIG1-210ENST00000596332 PEBP4Q96S96 227 aa10.99□□□□□ -0.65
LIG1-210ENST00000596332 PPP1R9BQ96SB3 815 aa10.99□□□□□ -0.65
LIG1-210ENST00000596332 SELENOOQ9BVL4 669 aa10.99□□□□□ -0.65
LIG1-210ENST00000596332 ECT2Q9H8V3 914 aa10.99□□□□□ -0.65
LIG1-210ENST00000596332 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.99□□□□□ -0.65
LIG1-210ENST00000596332 DDIT4Q9NX09 232 aa10.99□□□□□ -0.65
LIG1-210ENST00000596332 DUS2Q9NX74 493 aaKnown RBP10.99□□□□□ -0.65
LIG1-210ENST00000596332 RRN3Q9NYV6 651 aa10.99□□□□□ -0.65
LIG1-210ENST00000596332 FBXO10Q9UK96 956 aa10.99□□□□□ -0.65
LIG1-210ENST00000596332 INTUQ9ULD6 942 aa10.99□□□□□ -0.65
LIG1-210ENST00000596332 NEU3Q9UQ49 428 aa10.99□□□□□ -0.65
LIG1-210ENST00000596332 NCOR1O75376 2440 aa10.99□□□□□ -0.65
LIG1-210ENST00000596332 FAM72CH0Y354 149 aa10.98□□□□□ -0.65
LIG1-210ENST00000596332 ACSL4O60488 711 aa10.98□□□□□ -0.65
LIG1-210ENST00000596332 LRCH4O75427 683 aa10.98□□□□□ -0.65
LIG1-210ENST00000596332 LATS1O95835 1130 aa10.98□□□□□ -0.65
LIG1-210ENST00000596332 PENKP01210 267 aaPredicted RBP10.98□□□□□ -0.65
LIG1-210ENST00000596332 CISD3P0C7P0 127 aa10.98□□□□□ -0.65
LIG1-210ENST00000596332 IL1R2P27930 398 aa10.98□□□□□ -0.65
LIG1-210ENST00000596332 OPRD1P41143 372 aa10.98□□□□□ -0.65
LIG1-210ENST00000596332 MAGEA1P43355 309 aa10.98□□□□□ -0.65
LIG1-210ENST00000596332 IRAK1P51617 712 aa10.98□□□□□ -0.65
LIG1-210ENST00000596332 KPNA1P52294 538 aaPredicted RBP10.98□□□□□ -0.65
LIG1-210ENST00000596332 VCPP55072 806 aaKnown RBP10.98□□□□□ -0.65
LIG1-210ENST00000596332 MLLT6P55198 1093 aaPredicted RBP10.98□□□□□ -0.65
LIG1-210ENST00000596332 NME3Q13232 169 aa10.98□□□□□ -0.65
LIG1-210ENST00000596332 DHCR24Q15392 516 aa10.98□□□□□ -0.65
LIG1-210ENST00000596332 C5orf22Q49AR2 442 aa10.98□□□□□ -0.65
LIG1-210ENST00000596332 SLC44A4Q53GD3 710 aa10.98□□□□□ -0.65
LIG1-210ENST00000596332 MS4A13Q5J8X5 152 aa10.98□□□□□ -0.65
LIG1-210ENST00000596332 LY6G5CQ5SRR4 150 aa10.98□□□□□ -0.65
LIG1-210ENST00000596332 FAM72AQ5TYM5 149 aa10.98□□□□□ -0.65
LIG1-210ENST00000596332 FYB2Q5VWT5 728 aa10.98□□□□□ -0.65
LIG1-210ENST00000596332 TXNRD3NBQ6F5E7 133 aa10.98□□□□□ -0.65
LIG1-210ENST00000596332 ASTLQ6HA08 431 aaPredicted RBP10.98□□□□□ -0.65
LIG1-210ENST00000596332 FAM72DQ6L9T8 149 aa10.98□□□□□ -0.65
LIG1-210ENST00000596332 FAM72BQ86X60 149 aa10.98□□□□□ -0.65
LIG1-210ENST00000596332 FAM131BQ86XD5 332 aa10.98□□□□□ -0.65
LIG1-210ENST00000596332 ETFBKMTQ8IXQ9 262 aa10.98□□□□□ -0.65
LIG1-210ENST00000596332 PHTF2Q8N3S3 785 aa10.98□□□□□ -0.65
LIG1-210ENST00000596332 CPXM2Q8N436 756 aa10.98□□□□□ -0.65
LIG1-210ENST00000596332 CCDC185Q8N715 623 aa10.98□□□□□ -0.65
LIG1-210ENST00000596332 NIPA2Q8N8Q9 360 aa10.98□□□□□ -0.65
LIG1-210ENST00000596332 FAM172AQ8WUF8 416 aa10.98□□□□□ -0.65
LIG1-210ENST00000596332 GOLGA1Q92805 767 aa10.98□□□□□ -0.65
LIG1-210ENST00000596332 EDAQ92838 391 aa10.98□□□□□ -0.65
LIG1-210ENST00000596332 DNASE1L2Q92874 299 aa10.98□□□□□ -0.65
LIG1-210ENST00000596332 IRF7Q92985 503 aa10.98□□□□□ -0.65
LIG1-210ENST00000596332 TRIM11Q96F44 468 aa10.98□□□□□ -0.65
LIG1-210ENST00000596332 LMLNQ96KR4 655 aa10.98□□□□□ -0.65
LIG1-210ENST00000596332 PRICKLE1Q96MT3 831 aaPredicted RBP10.98□□□□□ -0.65
LIG1-210ENST00000596332 CNPY3Q9BT09 278 aa10.98□□□□□ -0.65
LIG1-210ENST00000596332 TRIM62Q9BVG3 475 aa10.98□□□□□ -0.65
LIG1-210ENST00000596332 NUP85Q9BW27 656 aa10.98□□□□□ -0.65
LIG1-210ENST00000596332 NACA2Q9H009 215 aa10.98□□□□□ -0.65
LIG1-210ENST00000596332 EPHX3Q9H6B9 360 aa10.98□□□□□ -0.65
LIG1-210ENST00000596332 C11orf16Q9NQ32 467 aa10.98□□□□□ -0.65
LIG1-210ENST00000596332 SPHK2Q9NRA0 654 aa10.98□□□□□ -0.65
LIG1-210ENST00000596332 HEBP1Q9NRV9 189 aa10.98□□□□□ -0.65
LIG1-210ENST00000596332 MARK1Q9P0L2 795 aa10.98□□□□□ -0.65
LIG1-210ENST00000596332 WNT16Q9UBV4 365 aa10.98□□□□□ -0.65
LIG1-210ENST00000596332 HCN2Q9UL51 889 aa10.98□□□□□ -0.65
LIG1-210ENST00000596332 SNX10Q9Y5X0 201 aa10.98□□□□□ -0.65
LIG1-210ENST00000596332 ADGRG1Q9Y653 693 aa10.98□□□□□ -0.65
LIG1-210ENST00000596332 SYNJ2BP-COX16A0A087WUM0 186 aa10.97□□□□□ -0.65
LIG1-210ENST00000596332 TRDMT1O14717 391 aaKnown RBP10.97□□□□□ -0.65
LIG1-210ENST00000596332 TRIM24O15164 1050 aa10.97□□□□□ -0.65
LIG1-210ENST00000596332 PAGE1O75459 146 aa10.97□□□□□ -0.65
LIG1-210ENST00000596332 PDGFBP01127 241 aaPredicted RBP10.97□□□□□ -0.65
LIG1-210ENST00000596332 SDC4P31431 198 aa10.97□□□□□ -0.65
LIG1-210ENST00000596332 GJA4P35212 333 aa10.97□□□□□ -0.65
LIG1-210ENST00000596332 ADRA1BP35368 520 aa10.97□□□□□ -0.65
LIG1-210ENST00000596332 ARHGAP25P42331 645 aa10.97□□□□□ -0.65
LIG1-210ENST00000596332 SLC6A11P48066 632 aa10.97□□□□□ -0.65
LIG1-210ENST00000596332 HADHBP55084 474 aaKnown RBP10.97□□□□□ -0.65
LIG1-210ENST00000596332 DEUP1Q05D60 604 aa10.97□□□□□ -0.65
LIG1-210ENST00000596332 SEMA3BQ13214 749 aa10.97□□□□□ -0.65
LIG1-210ENST00000596332 PDGFRLQ15198 375 aa10.97□□□□□ -0.65
LIG1-210ENST00000596332 CA9Q16790 459 aa10.97□□□□□ -0.65
LIG1-210ENST00000596332 C10orf76Q5T2E6 689 aa10.97□□□□□ -0.65
LIG1-210ENST00000596332 ADGRF1Q5T601 910 aa10.97□□□□□ -0.65
LIG1-210ENST00000596332 MANEALQ5VSG8 457 aa10.97□□□□□ -0.65
LIG1-210ENST00000596332 RFWD3Q6PCD5 774 aa10.97□□□□□ -0.65
LIG1-210ENST00000596332 SFTPA1Q8IWL2 248 aa10.97□□□□□ -0.65
LIG1-210ENST00000596332 UBALD2Q8IYN6 164 aa10.97□□□□□ -0.65
LIG1-210ENST00000596332 IGSF8Q969P0 613 aa10.97□□□□□ -0.65
LIG1-210ENST00000596332 OTUB2Q96DC9 234 aa10.97□□□□□ -0.65
LIG1-210ENST00000596332 ZNF830Q96NB3 372 aaPredicted RBP10.97□□□□□ -0.65
LIG1-210ENST00000596332 DESI2Q9BSY9 194 aa10.97□□□□□ -0.65
LIG1-210ENST00000596332 DCLK3Q9C098 648 aa10.97□□□□□ -0.65
LIG1-210ENST00000596332 TKTL2Q9H0I9 626 aa10.97□□□□□ -0.65
LIG1-210ENST00000596332 DEF6Q9H4E7 631 aa10.97□□□□□ -0.65
LIG1-210ENST00000596332 BRD9Q9H8M2 597 aa10.97□□□□□ -0.65
LIG1-210ENST00000596332 FAM204AQ9H8W3 233 aa10.97□□□□□ -0.65
LIG1-210ENST00000596332 THG1LQ9NWX6 298 aaKnown RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms