RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 ATXN1P54253 815 aaKnown RBP13.98□□□□□ -0.17
VMP1-217ENST00000593168 CDH6P55285 790 aa13.98□□□□□ -0.17
VMP1-217ENST00000593168 PLD1Q13393 1074 aa13.98□□□□□ -0.17
VMP1-217ENST00000593168 MTMR3Q13615 1198 aa13.98□□□□□ -0.17
VMP1-217ENST00000593168 VEPH1Q14D04 833 aa13.98□□□□□ -0.17
VMP1-217ENST00000593168 DPYSL2Q16555 572 aa13.98□□□□□ -0.17
VMP1-217ENST00000593168 SND1Q7KZF4 910 aaKnown RBP eCLIP13.98□□□□□ -0.175e-7■■■□□ 16.3
VMP1-217ENST00000593168 ANKS1BQ7Z6G8 1248 aa13.98□□□□□ -0.17
VMP1-217ENST00000593168 GPR161Q8N6U8 529 aaKnown RBP13.98□□□□□ -0.17
VMP1-217ENST00000593168 PRELID2Q8N945 189 aa13.98□□□□□ -0.17
VMP1-217ENST00000593168 PDZD8Q8NEN9 1154 aa13.98□□□□□ -0.17
VMP1-217ENST00000593168 ACSF2Q96CM8 615 aaPredicted RBP13.98□□□□□ -0.17
VMP1-217ENST00000593168 SMOC2Q9H3U7 446 aa13.98□□□□□ -0.17
VMP1-217ENST00000593168 SLITRK6Q9H5Y7 841 aa13.98□□□□□ -0.17
VMP1-217ENST00000593168 FAM204AQ9H8W3 233 aa13.98□□□□□ -0.17
VMP1-217ENST00000593168 HOMER3Q9NSC5 361 aa13.98□□□□□ -0.17
VMP1-217ENST00000593168 PIGVQ9NUD9 493 aa13.98□□□□□ -0.17
VMP1-217ENST00000593168 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.98□□□□□ -0.17
VMP1-217ENST00000593168 DDIT4Q9NX09 232 aa13.98□□□□□ -0.17
VMP1-217ENST00000593168 GMIPQ9P107 970 aa13.98□□□□□ -0.17
VMP1-217ENST00000593168 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.98□□□□□ -0.17
VMP1-217ENST00000593168 FBXW11Q9UKB1 542 aa13.98□□□□□ -0.17
VMP1-217ENST00000593168 FZD10Q9ULW2 581 aa13.98□□□□□ -0.17
VMP1-217ENST00000593168 NR2E1Q9Y466 385 aa13.98□□□□□ -0.17
VMP1-217ENST00000593168 YIPF1Q9Y548 306 aa13.98□□□□□ -0.17
VMP1-217ENST00000593168 V9GYY5 206 aaPredicted RBP13.98□□□□□ -0.17
VMP1-217ENST00000593168 MYO10Q9HD67 2058 aa13.98□□□□□ -0.17
VMP1-217ENST00000593168 ZNF638Q14966 1978 aaKnown RBP13.97□□□□□ -0.17
VMP1-217ENST00000593168 TCRBV7S2A1N4TA0A589 114 aa13.97□□□□□ -0.17
VMP1-217ENST00000593168 HIDE1A8MVS5 230 aa13.97□□□□□ -0.17
VMP1-217ENST00000593168 PRRG1O14668 218 aa13.97□□□□□ -0.17
VMP1-217ENST00000593168 TGM5O43548 720 aa13.97□□□□□ -0.17
VMP1-217ENST00000593168 PHF2O75151 1096 aa13.97□□□□□ -0.17
VMP1-217ENST00000593168 TUBBP07437 444 aa13.97□□□□□ -0.17
VMP1-217ENST00000593168 HMGA1P17096 107 aaKnown RBP13.97□□□□□ -0.17
VMP1-217ENST00000593168 IL4RP24394 825 aa13.97□□□□□ -0.17
VMP1-217ENST00000593168 CHRNA3P32297 505 aa13.97□□□□□ -0.17
VMP1-217ENST00000593168 PGFP49763 221 aa13.97□□□□□ -0.17
VMP1-217ENST00000593168 SCAPQ12770 1279 aa13.97□□□□□ -0.17
VMP1-217ENST00000593168 NME3Q13232 169 aa13.97□□□□□ -0.17
VMP1-217ENST00000593168 KRT81Q14533 505 aa13.97□□□□□ -0.17
VMP1-217ENST00000593168 NAA30Q147X3 362 aaPredicted RBP13.97□□□□□ -0.17
VMP1-217ENST00000593168 ARL13BQ3SXY8 428 aa13.97□□□□□ -0.17
VMP1-217ENST00000593168 SNX30Q5VWJ9 437 aa13.97□□□□□ -0.17
VMP1-217ENST00000593168 PDE12Q6L8Q7 609 aaKnown RBP13.97□□□□□ -0.17
VMP1-217ENST00000593168 BBS12Q6ZW61 710 aa13.97□□□□□ -0.17
VMP1-217ENST00000593168 RTL10Q7L3V2 364 aa13.97□□□□□ -0.17
VMP1-217ENST00000593168 ASCL5Q7RTU5 278 aa13.97□□□□□ -0.17
VMP1-217ENST00000593168 ADAT2Q7Z6V5 191 aaKnown RBP13.97□□□□□ -0.17
VMP1-217ENST00000593168 TAC4Q86UU9 113 aa13.97□□□□□ -0.17
VMP1-217ENST00000593168 FAM131BQ86XD5 332 aa13.97□□□□□ -0.17
VMP1-217ENST00000593168 CCDC185Q8N715 623 aa13.97□□□□□ -0.17
VMP1-217ENST00000593168 C12orf50Q8NA57 414 aaPredicted RBP13.97□□□□□ -0.17
VMP1-217ENST00000593168 STKLD1Q8NE28 680 aa13.97□□□□□ -0.17
VMP1-217ENST00000593168 TRMT2BQ96GJ1 504 aaKnown RBP13.97□□□□□ -0.17
VMP1-217ENST00000593168 RUNDC3BQ96NL0 473 aa13.97□□□□□ -0.17
VMP1-217ENST00000593168 KRT12Q99456 494 aa13.97□□□□□ -0.17
VMP1-217ENST00000593168 ZNF670Q9BS34 389 aa13.97□□□□□ -0.17
VMP1-217ENST00000593168 HERPUD2Q9BSE4 406 aa13.97□□□□□ -0.17
VMP1-217ENST00000593168 HEMGNQ9BXL5 484 aa13.97□□□□□ -0.17
VMP1-217ENST00000593168 IRF2BPLQ9H1B7 796 aa13.97□□□□□ -0.17
VMP1-217ENST00000593168 LRRC19Q9H756 370 aa13.97□□□□□ -0.17
VMP1-217ENST00000593168 PCDH18Q9HCL0 1135 aa13.97□□□□□ -0.17
VMP1-217ENST00000593168 ENTPD7Q9NQZ7 604 aa13.97□□□□□ -0.17
VMP1-217ENST00000593168 OLA1Q9NTK5 396 aaKnown RBP13.97□□□□□ -0.17
VMP1-217ENST00000593168 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.97□□□□□ -0.17
VMP1-217ENST00000593168 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.97□□□□□ -0.17
VMP1-217ENST00000593168 OSER1Q9NX31 292 aa13.97□□□□□ -0.17
VMP1-217ENST00000593168 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.97□□□□□ -0.17
VMP1-217ENST00000593168 RCOR3Q9P2K3 495 aaPredicted RBP13.97□□□□□ -0.17
VMP1-217ENST00000593168 AP4E1Q9UPM8 1137 aa13.97□□□□□ -0.17
VMP1-217ENST00000593168 ASB3Q9Y575 518 aa13.97□□□□□ -0.17
VMP1-217ENST00000593168 INSL5Q9Y5Q6 135 aa13.97□□□□□ -0.17
VMP1-217ENST00000593168 CACNA1HO95180 2353 aa13.97□□□□□ -0.17
VMP1-217ENST00000593168 TARSL2A2RTX5 802 aaKnown RBP13.96□□□□□ -0.17
VMP1-217ENST00000593168 C2orf71A6NGG8 1288 aa13.96□□□□□ -0.17
VMP1-217ENST00000593168 PROB1E7EW31 1015 aa13.96□□□□□ -0.17
VMP1-217ENST00000593168 IRAK2O43187 625 aa13.96□□□□□ -0.17
VMP1-217ENST00000593168 GALR2O43603 387 aaPredicted RBP13.96□□□□□ -0.17
VMP1-217ENST00000593168 CD48P09326 243 aa13.96□□□□□ -0.17
VMP1-217ENST00000593168 SRGAP2BP0DMP2 458 aa13.96□□□□□ -0.17
VMP1-217ENST00000593168 RARGP13631 454 aa13.96□□□□□ -0.17
VMP1-217ENST00000593168 KRT10P13645 584 aa13.96□□□□□ -0.17
VMP1-217ENST00000593168 KLRC2P26717 231 aa13.96□□□□□ -0.17
VMP1-217ENST00000593168 L1CAMP32004 1257 aa13.96□□□□□ -0.17
VMP1-217ENST00000593168 CA8P35219 290 aa13.96□□□□□ -0.17
VMP1-217ENST00000593168 PPP3CCP48454 512 aa13.96□□□□□ -0.17
VMP1-217ENST00000593168 EPHB3P54753 998 aa13.96□□□□□ -0.17
VMP1-217ENST00000593168 TWF1Q12792 350 aa13.96□□□□□ -0.17
VMP1-217ENST00000593168 NNTQ13423 1086 aa13.96□□□□□ -0.17
VMP1-217ENST00000593168 TFDP2Q14188 446 aa13.96□□□□□ -0.17
VMP1-217ENST00000593168 DPYSL3Q14195 570 aa13.96□□□□□ -0.17
VMP1-217ENST00000593168 LLGL1Q15334 1064 aa13.96□□□□□ -0.17
VMP1-217ENST00000593168 CCNG2Q16589 344 aa13.96□□□□□ -0.17
VMP1-217ENST00000593168 CA9Q16790 459 aa13.96□□□□□ -0.17
VMP1-217ENST00000593168 ZC3H12AQ5D1E8 599 aaKnown RBP13.96□□□□□ -0.17
VMP1-217ENST00000593168 BRMS1LQ5PSV4 323 aa13.96□□□□□ -0.17
VMP1-217ENST00000593168 CCDC149Q6ZUS6 474 aa13.96□□□□□ -0.17
VMP1-217ENST00000593168 ITIH5Q86UX2 942 aa13.96□□□□□ -0.17
VMP1-217ENST00000593168 KLHL7Q8IXQ5 586 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms