RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 NECTIN4Q96NY8 510 aa6.73□□□□□ -1.33
VPS4B-205ENST00000591383 SLITRK1Q96PX8 696 aa6.73□□□□□ -1.33
VPS4B-205ENST00000591383 KCNK16Q96T55 309 aa6.73□□□□□ -1.33
VPS4B-205ENST00000591383 NUP58Q9BVL2 599 aa6.73□□□□□ -1.33
VPS4B-205ENST00000591383 DUSP16Q9BY84 665 aa6.73□□□□□ -1.33
VPS4B-205ENST00000591383 BRINP2Q9C0B6 783 aa6.73□□□□□ -1.33
VPS4B-205ENST00000591383 TTYH3Q9C0H2 523 aa6.73□□□□□ -1.33
VPS4B-205ENST00000591383 ADAM19Q9H013 955 aa6.73□□□□□ -1.33
VPS4B-205ENST00000591383 TNKS2Q9H2K2 1166 aa6.73□□□□□ -1.33
VPS4B-205ENST00000591383 LRRC4Q9HBW1 653 aa6.73□□□□□ -1.33
VPS4B-205ENST00000591383 GMIPQ9P107 970 aa6.73□□□□□ -1.33
VPS4B-205ENST00000591383 HSFX1Q9UBD0 423 aa6.73□□□□□ -1.33
VPS4B-205ENST00000591383 UXTQ9UBK9 157 aaPredicted RBP6.73□□□□□ -1.33
VPS4B-205ENST00000591383 KIAA1257Q9ULG3 409 aa6.73□□□□□ -1.33
VPS4B-205ENST00000591383 CNTN6Q9UQ52 1028 aa6.73□□□□□ -1.33
VPS4B-205ENST00000591383 ASB3Q9Y575 518 aa6.73□□□□□ -1.33
VPS4B-205ENST00000591383 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.73□□□□□ -1.33
VPS4B-205ENST00000591383 BDP1A6H8Y1 2624 aa6.73□□□□□ -1.33
VPS4B-205ENST00000591383 TTC28Q96AY4 2481 aa6.72□□□□□ -1.33
VPS4B-205ENST00000591383 ANAPC1Q9H1A4 1944 aa6.72□□□□□ -1.33
VPS4B-205ENST00000591383 hCG_2014768A0A024R1R8 64 aa6.72□□□□□ -1.33
VPS4B-205ENST00000591383 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.72□□□□□ -1.33
VPS4B-205ENST00000591383 A0A1W2PQJ5 194 aa6.72□□□□□ -1.33
VPS4B-205ENST00000591383 GOLGA6L6A8MZA4 724 aa6.72□□□□□ -1.33
VPS4B-205ENST00000591383 NRG2O14511 850 aaPredicted RBP6.72□□□□□ -1.33
VPS4B-205ENST00000591383 XPO1O14980 1071 aaKnown RBP6.72□□□□□ -1.33
VPS4B-205ENST00000591383 ST8SIA5O15466 376 aa6.72□□□□□ -1.33
VPS4B-205ENST00000591383 PDPK1O15530 556 aa6.72□□□□□ -1.33
VPS4B-205ENST00000591383 SIN3BO75182 1162 aa6.72□□□□□ -1.33
VPS4B-205ENST00000591383 RTN3O95197 1032 aaPredicted RBP6.72□□□□□ -1.33
VPS4B-205ENST00000591383 ADCY5O95622 1261 aa6.72□□□□□ -1.33
VPS4B-205ENST00000591383 FGF19O95750 216 aa6.72□□□□□ -1.33
VPS4B-205ENST00000591383 MMEP08473 750 aa6.72□□□□□ -1.33
VPS4B-205ENST00000591383 ESRRAP11474 423 aaPredicted RBP6.72□□□□□ -1.33
VPS4B-205ENST00000591383 PTPN2P17706 415 aa6.72□□□□□ -1.33
VPS4B-205ENST00000591383 YWHAQP27348 245 aa6.72□□□□□ -1.33
VPS4B-205ENST00000591383 CDC25CP30307 473 aa6.72□□□□□ -1.33
VPS4B-205ENST00000591383 CASP14P31944 242 aa6.72□□□□□ -1.33
VPS4B-205ENST00000591383 CCR2P41597 374 aa6.72□□□□□ -1.33
VPS4B-205ENST00000591383 TKTL1P51854 596 aa6.72□□□□□ -1.33
VPS4B-205ENST00000591383 MRPS5P82675 430 aaKnown RBP6.72□□□□□ -1.33
VPS4B-205ENST00000591383 ZBED6P86452 979 aa6.72□□□□□ -1.33
VPS4B-205ENST00000591383 RPL6Q02878 288 aaKnown RBP6.72□□□□□ -1.33
VPS4B-205ENST00000591383 KLHL30Q0D2K2 578 aa6.72□□□□□ -1.33
VPS4B-205ENST00000591383 TEAD2Q15562 447 aa6.72□□□□□ -1.33
VPS4B-205ENST00000591383 ARHGAP15Q53QZ3 475 aa6.72□□□□□ -1.33
VPS4B-205ENST00000591383 FIGNQ5HY92 759 aa6.72□□□□□ -1.33
VPS4B-205ENST00000591383 PERM1Q5SV97 790 aa6.72□□□□□ -1.33
VPS4B-205ENST00000591383 STXBP5Q5T5C0 1151 aa6.72□□□□□ -1.33
VPS4B-205ENST00000591383 GPR158Q5T848 1215 aa6.72□□□□□ -1.33
VPS4B-205ENST00000591383 ZNF468Q5VIY5 522 aaPredicted RBP6.72□□□□□ -1.33
VPS4B-205ENST00000591383 NAA35Q5VZE5 725 aa6.72□□□□□ -1.33
VPS4B-205ENST00000591383 RTL10Q7L3V2 364 aa6.72□□□□□ -1.33
VPS4B-205ENST00000591383 DNAJB7Q7Z6W7 309 aaPredicted RBP6.72□□□□□ -1.33
VPS4B-205ENST00000591383 PIGZQ86VD9 579 aa6.72□□□□□ -1.33
VPS4B-205ENST00000591383 FMNL3Q8IVF7 1028 aa6.72□□□□□ -1.33
VPS4B-205ENST00000591383 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.72□□□□□ -1.33
VPS4B-205ENST00000591383 NPAS3Q8IXF0 933 aa6.72□□□□□ -1.33
VPS4B-205ENST00000591383 NUP93Q8N1F7 819 aa6.72□□□□□ -1.33
VPS4B-205ENST00000591383 SPC24Q8NBT2 197 aa6.72□□□□□ -1.33
VPS4B-205ENST00000591383 LEMD2Q8NC56 503 aa6.72□□□□□ -1.33
VPS4B-205ENST00000591383 MSANTD4Q8NCY6 345 aa6.72□□□□□ -1.33
VPS4B-205ENST00000591383 ST13P5Q8NFI4 369 aaPredicted RBP6.72□□□□□ -1.33
VPS4B-205ENST00000591383 SCAMP5Q8TAC9 235 aa6.72□□□□□ -1.33
VPS4B-205ENST00000591383 ITFG1Q8TB96 612 aa6.72□□□□□ -1.33
VPS4B-205ENST00000591383 SHKBP1Q8TBC3 707 aa6.72□□□□□ -1.33
VPS4B-205ENST00000591383 SUSD6Q92537 303 aa6.72□□□□□ -1.33
VPS4B-205ENST00000591383 MRPS31Q92665 395 aaKnown RBP6.72□□□□□ -1.33
VPS4B-205ENST00000591383 FAM149B1Q96BN6 582 aa6.72□□□□□ -1.33
VPS4B-205ENST00000591383 RPGRIP1Q96KN7 1286 aa6.72□□□□□ -1.33
VPS4B-205ENST00000591383 SPATA17Q96L03 361 aa6.72□□□□□ -1.33
VPS4B-205ENST00000591383 NOX5Q96PH1 765 aa6.72□□□□□ -1.33
VPS4B-205ENST00000591383 ULBP1Q9BZM6 244 aa6.72□□□□□ -1.33
VPS4B-205ENST00000591383 NACA2Q9H009 215 aa6.72□□□□□ -1.33
VPS4B-205ENST00000591383 MIS12Q9H081 205 aa6.72□□□□□ -1.33
VPS4B-205ENST00000591383 S1PR5Q9H228 398 aa6.72□□□□□ -1.33
VPS4B-205ENST00000591383 ATXN3LQ9H3M9 355 aa6.72□□□□□ -1.33
VPS4B-205ENST00000591383 WDR6Q9NNW5 1121 aaKnown RBP6.72□□□□□ -1.33
VPS4B-205ENST00000591383 EHD2Q9NZN4 543 aa6.72□□□□□ -1.33
VPS4B-205ENST00000591383 DNMT3BQ9UBC3 853 aaKnown RBP6.72□□□□□ -1.33
VPS4B-205ENST00000591383 NAGPAQ9UK23 515 aa6.72□□□□□ -1.33
VPS4B-205ENST00000591383 NOCTQ9UK39 431 aaKnown RBP6.72□□□□□ -1.33
VPS4B-205ENST00000591383 MYO6Q9UM54 1294 aa6.72□□□□□ -1.33
VPS4B-205ENST00000591383 POLR3KQ9Y2Y1 108 aaPredicted RBP6.72□□□□□ -1.33
VPS4B-205ENST00000591383 LUC7L2Q9Y383 392 aaKnown RBP6.72□□□□□ -1.33
VPS4B-205ENST00000591383 C2CD4DB7Z1M9 353 aa6.71□□□□□ -1.34
VPS4B-205ENST00000591383 HHLA1C9JL84 531 aa6.71□□□□□ -1.34
VPS4B-205ENST00000591383 E5RJQ4 531 aa6.71□□□□□ -1.34
VPS4B-205ENST00000591383 ZNF197O14709 1029 aa6.71□□□□□ -1.34
VPS4B-205ENST00000591383 TADA3O75528 432 aa6.71□□□□□ -1.34
VPS4B-205ENST00000591383 LSM8O95777 96 aaKnown RBP6.71□□□□□ -1.34
VPS4B-205ENST00000591383 CKMP06732 381 aa6.71□□□□□ -1.34
VPS4B-205ENST00000591383 CCDC172P0C7W6 258 aa6.71□□□□□ -1.34
VPS4B-205ENST00000591383 HMGA1P17096 107 aaKnown RBP6.71□□□□□ -1.34
VPS4B-205ENST00000591383 NSFP46459 744 aaKnown RBP6.71□□□□□ -1.34
VPS4B-205ENST00000591383 FMO1Q01740 532 aa6.71□□□□□ -1.34
VPS4B-205ENST00000591383 CDR2Q01850 454 aa6.71□□□□□ -1.34
VPS4B-205ENST00000591383 TAF10Q12962 218 aa6.71□□□□□ -1.34
VPS4B-205ENST00000591383 SMAD2Q15796 467 aaKnown RBP6.71□□□□□ -1.34
VPS4B-205ENST00000591383 CNGA2Q16280 664 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms