RNA–Protein interactions for RNA: ENST00000589116.1

CCBE1-203, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 1 (best)

Gene CCBE1, Length 1,691 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-203ENST00000589116 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.5□□□□□ -0.41
CCBE1-203ENST00000589116 OLA1Q9NTK5 396 aaKnown RBP12.5□□□□□ -0.41
CCBE1-203ENST00000589116 FAM53CQ9NYF3 392 aa12.5□□□□□ -0.41
CCBE1-203ENST00000589116 FAM153AQ9UHL3 310 aa12.5□□□□□ -0.41
CCBE1-203ENST00000589116 MAFFQ9ULX9 164 aa12.5□□□□□ -0.41
CCBE1-203ENST00000589116 HPCAL4Q9UM19 191 aa12.5□□□□□ -0.41
CCBE1-203ENST00000589116 SSX2IPQ9Y2D8 614 aa12.5□□□□□ -0.41
CCBE1-203ENST00000589116 SLC27A5Q9Y2P5 690 aa12.5□□□□□ -0.41
CCBE1-203ENST00000589116 INSL6Q9Y581 213 aa12.5□□□□□ -0.41
CCBE1-203ENST00000589116 SGK1O00141 431 aa12.49□□□□□ -0.41
CCBE1-203ENST00000589116 ADAM12O43184 909 aa12.49□□□□□ -0.41
CCBE1-203ENST00000589116 ZNF189O75820 626 aaPredicted RBP12.49□□□□□ -0.41
CCBE1-203ENST00000589116 ABLIM3O94929 683 aa12.49□□□□□ -0.41
CCBE1-203ENST00000589116 GOT1P17174 413 aa12.49□□□□□ -0.41
CCBE1-203ENST00000589116 STIP1P31948 543 aaKnown RBP12.49□□□□□ -0.41
CCBE1-203ENST00000589116 HTR7P34969 479 aa12.49□□□□□ -0.41
CCBE1-203ENST00000589116 ADCY8P40145 1251 aa12.49□□□□□ -0.41
CCBE1-203ENST00000589116 PLTPP55058 493 aa12.49□□□□□ -0.41
CCBE1-203ENST00000589116 USP46P62068 366 aa12.49□□□□□ -0.41
CCBE1-203ENST00000589116 SMAD3P84022 425 aaKnown RBP12.49□□□□□ -0.41
CCBE1-203ENST00000589116 GPS2Q13227 327 aa12.49□□□□□ -0.41
CCBE1-203ENST00000589116 XRCC4Q13426 336 aa12.49□□□□□ -0.41
CCBE1-203ENST00000589116 MTMR3Q13615 1198 aa12.49□□□□□ -0.41
CCBE1-203ENST00000589116 PPP2R5DQ14738 602 aa12.49□□□□□ -0.41
CCBE1-203ENST00000589116 SPDYCQ5MJ68 293 aa12.49□□□□□ -0.41
CCBE1-203ENST00000589116 TMEM240Q5SV17 173 aa12.49□□□□□ -0.41
CCBE1-203ENST00000589116 PYROXD2Q8N2H3 581 aa12.49□□□□□ -0.41
CCBE1-203ENST00000589116 PHOSPHO2Q8TCD6 241 aa12.49□□□□□ -0.41
CCBE1-203ENST00000589116 RSAD2Q8WXG1 361 aa12.49□□□□□ -0.41
CCBE1-203ENST00000589116 HERVK_113Q902F9 699 aa12.49□□□□□ -0.41
CCBE1-203ENST00000589116 CLP1Q92989 425 aaKnown RBP12.49□□□□□ -0.41
CCBE1-203ENST00000589116 GDAP1L1Q96MZ0 367 aa12.49□□□□□ -0.41
CCBE1-203ENST00000589116 EPAS1Q99814 870 aa12.49□□□□□ -0.41
CCBE1-203ENST00000589116 TMEM121Q9BTD3 319 aa12.49□□□□□ -0.41
CCBE1-203ENST00000589116 TKTL2Q9H0I9 626 aa12.49□□□□□ -0.41
CCBE1-203ENST00000589116 TSPYL1Q9H0U9 437 aa12.49□□□□□ -0.41
CCBE1-203ENST00000589116 ARHGEF4Q9NR80 690 aa12.49□□□□□ -0.41
CCBE1-203ENST00000589116 ARHGEF38Q9NXL2 777 aa12.49□□□□□ -0.41
CCBE1-203ENST00000589116 GMIPQ9P107 970 aa12.49□□□□□ -0.41
CCBE1-203ENST00000589116 FNIP2Q9P278 1114 aa12.49□□□□□ -0.41
CCBE1-203ENST00000589116 SAE1Q9UBE0 346 aaPredicted RBP12.49□□□□□ -0.41
CCBE1-203ENST00000589116 LAMA2P24043 3122 aaKnown RBP12.49□□□□□ -0.41
CCBE1-203ENST00000589116 SLC38A8A6NNN8 435 aa12.48□□□□□ -0.41
CCBE1-203ENST00000589116 EEF2KO00418 725 aaKnown RBP12.48□□□□□ -0.41
CCBE1-203ENST00000589116 C2CD2LO14523 706 aa12.48□□□□□ -0.41
CCBE1-203ENST00000589116 SLC2A3P11169 496 aa12.48□□□□□ -0.41
CCBE1-203ENST00000589116 RPL17P18621 184 aaKnown RBP12.48□□□□□ -0.41
CCBE1-203ENST00000589116 ATF6P18850 670 aa12.48□□□□□ -0.41
CCBE1-203ENST00000589116 CCR1P32246 355 aa12.48□□□□□ -0.41
CCBE1-203ENST00000589116 RAB33AQ14088 237 aa12.48□□□□□ -0.41
CCBE1-203ENST00000589116 DPYSQ14117 519 aa12.48□□□□□ -0.41
CCBE1-203ENST00000589116 SHHQ15465 462 aa12.48□□□□□ -0.41
CCBE1-203ENST00000589116 NCBP2-AS2Q69YL0 99 aa12.48□□□□□ -0.41
CCBE1-203ENST00000589116 NPNTQ6UXI9 565 aa12.48□□□□□ -0.41
CCBE1-203ENST00000589116 RFX8Q6ZV50 586 aa12.48□□□□□ -0.41
CCBE1-203ENST00000589116 TMC3Q7Z5M5 1100 aa12.48□□□□□ -0.41
CCBE1-203ENST00000589116 CDKL3Q8IVW4 592 aaPredicted RBP12.48□□□□□ -0.41
CCBE1-203ENST00000589116 VPS52Q8N1B4 723 aa12.48□□□□□ -0.41
CCBE1-203ENST00000589116 PDZD8Q8NEN9 1154 aa12.48□□□□□ -0.41
CCBE1-203ENST00000589116 OVCA2Q8WZ82 227 aa12.48□□□□□ -0.41
CCBE1-203ENST00000589116 CASP10Q92851 521 aa12.48□□□□□ -0.41
CCBE1-203ENST00000589116 HAPLN3Q96S86 360 aa12.48□□□□□ -0.41
CCBE1-203ENST00000589116 CDK5RAP1Q96SZ6 601 aaKnown RBP12.48□□□□□ -0.41
CCBE1-203ENST00000589116 ZBED2Q9BTP6 218 aa12.48□□□□□ -0.41
CCBE1-203ENST00000589116 FOXP3Q9BZS1 431 aa12.48□□□□□ -0.41
CCBE1-203ENST00000589116 OSBPL2Q9H1P3 480 aa12.48□□□□□ -0.41
CCBE1-203ENST00000589116 MTIF3Q9H2K0 278 aaKnown RBP12.48□□□□□ -0.41
CCBE1-203ENST00000589116 MRPL17Q9NRX2 175 aaKnown RBP12.48□□□□□ -0.41
CCBE1-203ENST00000589116 HCN4Q9Y3Q4 1203 aa12.48□□□□□ -0.41
CCBE1-203ENST00000589116 MUC3AQ02505 3323 aa12.48□□□□□ -0.41
CCBE1-203ENST00000589116 BCLAF3A2AJT9 711 aaKnown RBP12.48□□□□□ -0.41
CCBE1-203ENST00000589116 H7C0C1 242 aa12.48□□□□□ -0.41
CCBE1-203ENST00000589116 DNALI1O14645 258 aaPredicted RBP12.48□□□□□ -0.41
CCBE1-203ENST00000589116 CREB3O43889 395 aa12.48□□□□□ -0.41
CCBE1-203ENST00000589116 PPFIA2O75334 1257 aa12.48□□□□□ -0.41
CCBE1-203ENST00000589116 SOAT2O75908 522 aa12.48□□□□□ -0.41
CCBE1-203ENST00000589116 ZDHHC11BP0C7U3 371 aa12.48□□□□□ -0.41
CCBE1-203ENST00000589116 LINC00271P0C7V0 271 aa12.48□□□□□ -0.41
CCBE1-203ENST00000589116 ATP5OP48047 213 aa12.48□□□□□ -0.41
CCBE1-203ENST00000589116 TPI1P60174 286 aa12.48□□□□□ -0.41
CCBE1-203ENST00000589116 TAF10Q12962 218 aa12.48□□□□□ -0.41
CCBE1-203ENST00000589116 TRIP13Q15645 432 aaPredicted RBP12.48□□□□□ -0.41
CCBE1-203ENST00000589116 ALS2CLQ60I27 953 aa12.48□□□□□ -0.41
CCBE1-203ENST00000589116 DARS2Q6PI48 645 aaKnown RBP12.48□□□□□ -0.41
CCBE1-203ENST00000589116 C1orf228Q6PIY5 440 aa12.48□□□□□ -0.41
CCBE1-203ENST00000589116 RHBDF2Q6PJF5 856 aa12.48□□□□□ -0.41
CCBE1-203ENST00000589116 CEP128Q6ZU80 1094 aa12.48□□□□□ -0.41
CCBE1-203ENST00000589116 ZNF276Q8N554 614 aa12.48□□□□□ -0.41
CCBE1-203ENST00000589116 SP7Q8TDD2 431 aaPredicted RBP12.48□□□□□ -0.41
CCBE1-203ENST00000589116 ADAMTS19Q8TE59 1207 aa12.48□□□□□ -0.41
CCBE1-203ENST00000589116 RNF34Q969K3 372 aa12.48□□□□□ -0.41
CCBE1-203ENST00000589116 RTP4Q96DX8 246 aa12.48□□□□□ -0.41
CCBE1-203ENST00000589116 UHRF1Q96T88 793 aaPredicted RBP12.48□□□□□ -0.41
CCBE1-203ENST00000589116 RAD9AQ99638 391 aa12.48□□□□□ -0.41
CCBE1-203ENST00000589116 ZBP1Q9H171 429 aa12.48□□□□□ -0.41
CCBE1-203ENST00000589116 ANLNQ9NQW6 1124 aa12.48□□□□□ -0.41
CCBE1-203ENST00000589116 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.48□□□□□ -0.41
CCBE1-203ENST00000589116 OSER1Q9NX31 292 aa12.48□□□□□ -0.41
CCBE1-203ENST00000589116 OGFRQ9NZT2 677 aa12.48□□□□□ -0.41
CCBE1-203ENST00000589116 TLR6Q9Y2C9 796 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms