RNA–Protein interactions for RNA: ENST00000587163.1

NPC1-205, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-205ENST00000587163 SLC2A11Q9BYW1 496 aa17.1■□□□□ 0.33
NPC1-205ENST00000587163 IMPG2Q9BZV3 1241 aa17.1■□□□□ 0.33
NPC1-205ENST00000587163 MMRN2Q9H8L6 949 aa17.1■□□□□ 0.33
NPC1-205ENST00000587163 TRAF3IP3Q9Y228 551 aa17.1■□□□□ 0.33
NPC1-205ENST00000587163 NUMA1Q14980 2115 aa17.09■□□□□ 0.33
NPC1-205ENST00000587163 GOLGA8CPA6NN73 597 aa17.09■□□□□ 0.33
NPC1-205ENST00000587163 MAPK13O15264 365 aa17.09■□□□□ 0.33
NPC1-205ENST00000587163 CALUO43852 315 aaPredicted RBP17.09■□□□□ 0.33
NPC1-205ENST00000587163 CYBBP04839 570 aa17.09■□□□□ 0.33
NPC1-205ENST00000587163 ZSCAN22P10073 491 aaPredicted RBP17.09■□□□□ 0.33
NPC1-205ENST00000587163 ACSL1P33121 698 aa17.09■□□□□ 0.33
NPC1-205ENST00000587163 YWHAGP61981 247 aaKnown RBP eCLIP17.09■□□□□ 0.33
NPC1-205ENST00000587163 CAMK2GQ13555 558 aaPredicted RBP17.09■□□□□ 0.33
NPC1-205ENST00000587163 KIF19Q2TAC6 998 aa17.09■□□□□ 0.33
NPC1-205ENST00000587163 RAB41Q5JT25 222 aa17.09■□□□□ 0.33
NPC1-205ENST00000587163 SERPINA13PQ6UXR4 307 aa17.09■□□□□ 0.33
NPC1-205ENST00000587163 RSRC2Q7L4I2 434 aaKnown RBP17.09■□□□□ 0.33
NPC1-205ENST00000587163 PIGZQ86VD9 579 aa17.09■□□□□ 0.33
NPC1-205ENST00000587163 ZNF366Q8N895 744 aa17.09■□□□□ 0.33
NPC1-205ENST00000587163 SLC4A11Q8NBS3 891 aa17.09■□□□□ 0.33
NPC1-205ENST00000587163 SNX19Q92543 992 aa17.09■□□□□ 0.33
NPC1-205ENST00000587163 SEMA4DQ92854 862 aa17.09■□□□□ 0.33
NPC1-205ENST00000587163 ARID3AQ99856 593 aa17.09■□□□□ 0.33
NPC1-205ENST00000587163 PCDHGB2Q9Y5G2 931 aa17.09■□□□□ 0.33
NPC1-205ENST00000587163 SNX11Q9Y5W9 270 aa17.09■□□□□ 0.33
NPC1-205ENST00000587163 APC2O95996 2303 aa17.08■□□□□ 0.33
NPC1-205ENST00000587163 KNL1Q8NG31 2342 aa17.08■□□□□ 0.33
NPC1-205ENST00000587163 KCNK3O14649 394 aa17.08■□□□□ 0.32
NPC1-205ENST00000587163 TIMM44O43615 452 aa17.08■□□□□ 0.32
NPC1-205ENST00000587163 TSPAN3O60637 253 aa17.08■□□□□ 0.32
NPC1-205ENST00000587163 F13A1P00488 732 aa17.08■□□□□ 0.32
NPC1-205ENST00000587163 NR2F2P24468 414 aa17.08■□□□□ 0.32
NPC1-205ENST00000587163 HOXD9P28356 352 aaPredicted RBP17.08■□□□□ 0.32
NPC1-205ENST00000587163 HLA-FP30511 346 aa17.08■□□□□ 0.32
NPC1-205ENST00000587163 RAD23BP54727 409 aa17.08■□□□□ 0.32
NPC1-205ENST00000587163 TRIP4Q15650 581 aaPredicted RBP17.08■□□□□ 0.32
NPC1-205ENST00000587163 BHLHA9Q7RTU4 235 aa17.08■□□□□ 0.32
NPC1-205ENST00000587163 OR2T3Q8NH03 318 aa17.08■□□□□ 0.32
NPC1-205ENST00000587163 CYB5D2Q8WUJ1 264 aa17.08■□□□□ 0.32
NPC1-205ENST00000587163 CDC6Q99741 560 aa17.08■□□□□ 0.32
NPC1-205ENST00000587163 UBXN6Q9BZV1 441 aa17.08■□□□□ 0.32
NPC1-205ENST00000587163 TMEM245Q9H330 911 aa17.08■□□□□ 0.32
NPC1-205ENST00000587163 RCOR1Q9UKL0 485 aa17.08■□□□□ 0.32
NPC1-205ENST00000587163 STRIP2Q9ULQ0 834 aa17.08■□□□□ 0.32
NPC1-205ENST00000587163 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.08■□□□□ 0.32
NPC1-205ENST00000587163 MAPK8IP1Q9UQF2 711 aa17.08■□□□□ 0.32
NPC1-205ENST00000587163 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.08■□□□□ 0.32
NPC1-205ENST00000587163 A0A1B0GVL5 298 aa17.07■□□□□ 0.32
NPC1-205ENST00000587163 TULP2O00295 520 aa17.07■□□□□ 0.32
NPC1-205ENST00000587163 FLRT2O43155 660 aa17.07■□□□□ 0.32
NPC1-205ENST00000587163 AFF3P51826 1226 aaKnown RBP17.07■□□□□ 0.32
NPC1-205ENST00000587163 KCNT1Q5JUK3 1230 aa17.07■□□□□ 0.32
NPC1-205ENST00000587163 LAYNQ6UX15 382 aa17.07■□□□□ 0.32
NPC1-205ENST00000587163 INTS8Q75QN2 995 aaKnown RBP17.07■□□□□ 0.32
NPC1-205ENST00000587163 ZC3H3Q8IXZ2 948 aaKnown RBP17.07■□□□□ 0.32
NPC1-205ENST00000587163 FAM186BQ8IYM0 893 aa17.07■□□□□ 0.32
NPC1-205ENST00000587163 ARHGAP18Q8N392 663 aa17.07■□□□□ 0.32
NPC1-205ENST00000587163 PLD4Q96BZ4 506 aa17.07■□□□□ 0.32
NPC1-205ENST00000587163 TMEM176AQ96HP8 235 aa17.07■□□□□ 0.32
NPC1-205ENST00000587163 BBC3Q96PG8 261 aaPredicted RBP17.07■□□□□ 0.32
NPC1-205ENST00000587163 PCED1AQ9H1Q7 454 aa17.07■□□□□ 0.32
NPC1-205ENST00000587163 LHX5Q9H2C1 402 aa17.07■□□□□ 0.32
NPC1-205ENST00000587163 TMEM8AQ9HCN3 771 aa17.07■□□□□ 0.32
NPC1-205ENST00000587163 TM9SF3Q9HD45 589 aa17.07■□□□□ 0.32
NPC1-205ENST00000587163 CISHQ9NSE2 258 aa17.07■□□□□ 0.32
NPC1-205ENST00000587163 TMEM131Q92545 1883 aa17.07■□□□□ 0.32
NPC1-205ENST00000587163 ACACAQ13085 2346 aa17.07■□□□□ 0.32
NPC1-205ENST00000587163 SMG1Q96Q15 3661 aaKnown RBP17.06■□□□□ 0.32
NPC1-205ENST00000587163 ZBED1O96006 694 aa17.06■□□□□ 0.32
NPC1-205ENST00000587163 PRR29P0C7W0 189 aa17.06■□□□□ 0.32
NPC1-205ENST00000587163 C7P10643 843 aa17.06■□□□□ 0.32
NPC1-205ENST00000587163 PFKFB1P16118 471 aa17.06■□□□□ 0.32
NPC1-205ENST00000587163 TKTL1P51854 596 aa17.06■□□□□ 0.32
NPC1-205ENST00000587163 ARID5AQ03989 594 aa17.06■□□□□ 0.32
NPC1-205ENST00000587163 DNM1Q05193 864 aaKnown RBP17.06■□□□□ 0.32
NPC1-205ENST00000587163 CYP4F3Q08477 520 aa17.06■□□□□ 0.32
NPC1-205ENST00000587163 CAMK2BQ13554 666 aa17.06■□□□□ 0.32
NPC1-205ENST00000587163 PKP1Q13835 747 aa17.06■□□□□ 0.32
NPC1-205ENST00000587163 E2F5Q15329 346 aa17.06■□□□□ 0.32
NPC1-205ENST00000587163 NFIL3Q16649 462 aa17.06■□□□□ 0.32
NPC1-205ENST00000587163 PTPRNQ16849 979 aa17.06■□□□□ 0.32
NPC1-205ENST00000587163 FNDC3BQ53EP0 1204 aaKnown RBP17.06■□□□□ 0.32
NPC1-205ENST00000587163 MPPE1Q53F39 396 aa17.06■□□□□ 0.32
NPC1-205ENST00000587163 ARHGAP17Q68EM7 881 aa17.06■□□□□ 0.32
NPC1-205ENST00000587163 PM20D1Q6GTS8 502 aa17.06■□□□□ 0.32
NPC1-205ENST00000587163 ADIPOR2Q86V24 386 aa17.06■□□□□ 0.32
NPC1-205ENST00000587163 FMNL3Q8IVF7 1028 aa17.06■□□□□ 0.32
NPC1-205ENST00000587163 ANKRD52Q8NB46 1076 aa17.06■□□□□ 0.32
NPC1-205ENST00000587163 TATDN2Q93075 761 aa17.06■□□□□ 0.32
NPC1-205ENST00000587163 BIRC7Q96CA5 298 aa17.06■□□□□ 0.32
NPC1-205ENST00000587163 ULBP1Q9BZM6 244 aa17.06■□□□□ 0.32
NPC1-205ENST00000587163 SFMBT1Q9UHJ3 866 aa17.06■□□□□ 0.32
NPC1-205ENST00000587163 ANKRD6Q9Y2G4 727 aa17.06■□□□□ 0.32
NPC1-205ENST00000587163 CABIN1Q9Y6J0 2220 aa17.05■□□□□ 0.32
NPC1-205ENST00000587163 MUC22E2RYF6 1773 aaPredicted RBP17.05■□□□□ 0.32
NPC1-205ENST00000587163 FAM149AA5PLN7 773 aa17.05■□□□□ 0.32
NPC1-205ENST00000587163 TRABD2BA6NFA1 517 aa17.05■□□□□ 0.32
NPC1-205ENST00000587163 KRT13P13646 458 aa17.05■□□□□ 0.32
NPC1-205ENST00000587163 SGSHP51688 502 aa17.05■□□□□ 0.32
NPC1-205ENST00000587163 MCCD1P59942 119 aaPredicted RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms