RNA–Protein interactions for RNA: ENST00000582892.1

NF1-222, Transcript of neurofibromin 1, humanhuman

TSL 4

Gene NF1, Length 462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-222ENST00000582892 TSPYL1Q9H0U9 437 aa7.81□□□□□ -1.16
NF1-222ENST00000582892 SMG9Q9H0W8 520 aaKnown RBP7.81□□□□□ -1.16
NF1-222ENST00000582892 BHMT2Q9H2M3 363 aa7.81□□□□□ -1.16
NF1-222ENST00000582892 DHX33Q9H6R0 707 aaKnown RBP7.81□□□□□ -1.16
NF1-222ENST00000582892 PARVGQ9HBI0 331 aa7.81□□□□□ -1.16
NF1-222ENST00000582892 CYP4F11Q9HBI6 524 aa7.81□□□□□ -1.16
NF1-222ENST00000582892 NLRC4Q9NPP4 1024 aa7.81□□□□□ -1.16
NF1-222ENST00000582892 XPNPEP1Q9NQW7 623 aa7.81□□□□□ -1.16
NF1-222ENST00000582892 GDF3Q9NR23 364 aa7.81□□□□□ -1.16
NF1-222ENST00000582892 TMEM74BQ9NUR3 256 aa7.81□□□□□ -1.16
NF1-222ENST00000582892 NDFIP2Q9NV92 336 aa7.81□□□□□ -1.16
NF1-222ENST00000582892 DMAC2Q9NW81 257 aa7.81□□□□□ -1.16
NF1-222ENST00000582892 VPS18Q9P253 973 aa7.81□□□□□ -1.16
NF1-222ENST00000582892 SALL4Q9UJQ4 1053 aa7.81□□□□□ -1.16
NF1-222ENST00000582892 GDF2Q9UK05 429 aaPredicted RBP7.81□□□□□ -1.16
NF1-222ENST00000582892 TMEM59LQ9UK28 342 aa7.81□□□□□ -1.16
NF1-222ENST00000582892 TFR2Q9UP52 801 aa7.81□□□□□ -1.16
NF1-222ENST00000582892 RAI2Q9Y5P3 530 aa7.81□□□□□ -1.16
NF1-222ENST00000582892 BOD1L1Q8NFC6 3051 aa7.81□□□□□ -1.16
NF1-222ENST00000582892 DOPEY2Q9Y3R5 2298 aa7.81□□□□□ -1.16
NF1-222ENST00000582892 ANKRD17O75179 2603 aaKnown RBP7.81□□□□□ -1.16
NF1-222ENST00000582892 PLXND1Q9Y4D7 1925 aa7.8□□□□□ -1.16
NF1-222ENST00000582892 A0A087X0T9 212 aa7.8□□□□□ -1.16
NF1-222ENST00000582892 NPHP3-ACAD11A0A0J9YXS1 232 aa7.8□□□□□ -1.16
NF1-222ENST00000582892 GOLGA6BA6NDN3 693 aa7.8□□□□□ -1.16
NF1-222ENST00000582892 CCDC188H7C350 402 aa7.8□□□□□ -1.16
NF1-222ENST00000582892 ZNF185O15231 689 aa7.8□□□□□ -1.16
NF1-222ENST00000582892 SHOX2O60902 331 aaPredicted RBP7.8□□□□□ -1.16
NF1-222ENST00000582892 RHOBTB1O94844 696 aa7.8□□□□□ -1.16
NF1-222ENST00000582892 SLITRK3O94933 977 aa7.8□□□□□ -1.16
NF1-222ENST00000582892 VNN2O95498 520 aa7.8□□□□□ -1.16
NF1-222ENST00000582892 EDN1P05305 212 aa7.8□□□□□ -1.16
NF1-222ENST00000582892 THBS1P07996 1170 aa7.8□□□□□ -1.16
NF1-222ENST00000582892 FAM228BP0C875 321 aa7.8□□□□□ -1.16
NF1-222ENST00000582892 ENGP17813 658 aa7.8□□□□□ -1.16
NF1-222ENST00000582892 SFNP31947 248 aa7.8□□□□□ -1.16
NF1-222ENST00000582892 STAT1P42224 750 aa7.8□□□□□ -1.16
NF1-222ENST00000582892 TNNT3P45378 269 aaPredicted RBP7.8□□□□□ -1.16
NF1-222ENST00000582892 DHPSP49366 369 aaPredicted RBP7.8□□□□□ -1.16
NF1-222ENST00000582892 CLCNKBP51801 687 aa7.8□□□□□ -1.16
NF1-222ENST00000582892 CDR1P51861 262 aa7.8□□□□□ -1.16
NF1-222ENST00000582892 CASP5P51878 434 aa7.8□□□□□ -1.16
NF1-222ENST00000582892 DGKEP52429 567 aa7.8□□□□□ -1.16
NF1-222ENST00000582892 MLLT6P55198 1093 aaPredicted RBP7.8□□□□□ -1.16
NF1-222ENST00000582892 PTENP60484 403 aa7.8□□□□□ -1.16
NF1-222ENST00000582892 ENPEPQ07075 957 aa7.8□□□□□ -1.16
NF1-222ENST00000582892 PDE4CQ08493 712 aa7.8□□□□□ -1.16
NF1-222ENST00000582892 C2orf54Q08AI8 447 aa7.8□□□□□ -1.16
NF1-222ENST00000582892 SEMA3BQ13214 749 aa7.8□□□□□ -1.16
NF1-222ENST00000582892 CAPSQ13938 189 aa7.8□□□□□ -1.16
NF1-222ENST00000582892 EMC2Q15006 297 aa7.8□□□□□ -1.16
NF1-222ENST00000582892 TCEAL1Q15170 157 aa7.8□□□□□ -1.16
NF1-222ENST00000582892 TRIM61Q5EBN2 209 aa7.8□□□□□ -1.16
NF1-222ENST00000582892 TMEM196Q5HYL7 178 aa7.8□□□□□ -1.16
NF1-222ENST00000582892 TMEM164Q5U3C3 297 aa7.8□□□□□ -1.16
NF1-222ENST00000582892 EMC10Q5UCC4 262 aa7.8□□□□□ -1.16
NF1-222ENST00000582892 TRIM68Q6AZZ1 485 aa7.8□□□□□ -1.16
NF1-222ENST00000582892 SLC8B1Q6J4K2 584 aa7.8□□□□□ -1.16
NF1-222ENST00000582892 LEKR1Q6ZMV7 388 aa7.8□□□□□ -1.16
NF1-222ENST00000582892 SLFN11Q7Z7L1 901 aa7.8□□□□□ -1.16
NF1-222ENST00000582892 TMC8Q8IU68 726 aa7.8□□□□□ -1.16
NF1-222ENST00000582892 ARID3BQ8IVW6 561 aaPredicted RBP7.8□□□□□ -1.16
NF1-222ENST00000582892 SVOPQ8N4V2 548 aa7.8□□□□□ -1.16
NF1-222ENST00000582892 ACTRT1Q8TDG2 376 aa7.8□□□□□ -1.16
NF1-222ENST00000582892 WHAMMQ8TF30 809 aa7.8□□□□□ -1.16
NF1-222ENST00000582892 TAF4BQ92750 862 aa7.8□□□□□ -1.16
NF1-222ENST00000582892 CEP170P1Q96L14 293 aa7.8□□□□□ -1.16
NF1-222ENST00000582892 TMEM209Q96SK2 561 aa7.8□□□□□ -1.16
NF1-222ENST00000582892 RUSC1Q9BVN2 902 aa7.8□□□□□ -1.16
NF1-222ENST00000582892 STRA6Q9BX79 667 aa7.8□□□□□ -1.16
NF1-222ENST00000582892 LRRC3Q9BY71 257 aa7.8□□□□□ -1.16
NF1-222ENST00000582892 ST6GALNAC4Q9H4F1 302 aa7.8□□□□□ -1.16
NF1-222ENST00000582892 SIX2Q9NPC8 291 aa7.8□□□□□ -1.16
NF1-222ENST00000582892 TBC1D7Q9P0N9 293 aa7.8□□□□□ -1.16
NF1-222ENST00000582892 NAGPAQ9UK23 515 aa7.8□□□□□ -1.16
NF1-222ENST00000582892 TTC7AQ9ULT0 858 aaPredicted RBP7.8□□□□□ -1.16
NF1-222ENST00000582892 ZMYM2Q9UBW7 1377 aa7.8□□□□□ -1.16
NF1-222ENST00000582892 KNL1Q8NG31 2342 aa7.8□□□□□ -1.16
NF1-222ENST00000582892 ZNF197O14709 1029 aa7.79□□□□□ -1.16
NF1-222ENST00000582892 TGFB1I1O43294 461 aa7.79□□□□□ -1.16
NF1-222ENST00000582892 PALMO75781 387 aa7.79□□□□□ -1.16
NF1-222ENST00000582892 RECQL4O94761 1208 aa7.79□□□□□ -1.16
NF1-222ENST00000582892 GCNT3O95395 438 aa7.79□□□□□ -1.16
NF1-222ENST00000582892 H2AFZP0C0S5 128 aa7.79□□□□□ -1.16
NF1-222ENST00000582892 PTGER3P43115 390 aa7.79□□□□□ -1.16
NF1-222ENST00000582892 LMAN1P49257 510 aa7.79□□□□□ -1.16
NF1-222ENST00000582892 EPHA5P54756 1037 aa7.79□□□□□ -1.16
NF1-222ENST00000582892 HADHBP55084 474 aaKnown RBP7.79□□□□□ -1.16
NF1-222ENST00000582892 HNRNPH2P55795 449 aaKnown RBP7.79□□□□□ -1.16
NF1-222ENST00000582892 TNP2Q05952 138 aa7.79□□□□□ -1.16
NF1-222ENST00000582892 SOX4Q06945 474 aaPredicted RBP7.79□□□□□ -1.16
NF1-222ENST00000582892 CUL1Q13616 776 aa7.79□□□□□ -1.16
NF1-222ENST00000582892 RPS6KA1Q15418 735 aa7.79□□□□□ -1.16
NF1-222ENST00000582892 ZSCAN26Q16670 478 aa7.79□□□□□ -1.16
NF1-222ENST00000582892 CYP4A22Q5TCH4 519 aa7.79□□□□□ -1.16
NF1-222ENST00000582892 ALKBH5Q6P6C2 394 aaKnown RBP7.79□□□□□ -1.16
NF1-222ENST00000582892 SLC27A1Q6PCB7 646 aa7.79□□□□□ -1.16
NF1-222ENST00000582892 H2AFVQ71UI9 128 aa7.79□□□□□ -1.16
NF1-222ENST00000582892 ZNF720Q7Z2F6 126 aa7.79□□□□□ -1.16
NF1-222ENST00000582892 ZNF571Q7Z3V5 609 aaPredicted RBP7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms