RNA–Protein interactions for RNA: ENST00000581113.6

NF1-220, Transcript of neurofibromin 1, humanhuman

TSL 5

Gene NF1, Length 1,464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-220ENST00000581113 TOP2BQ02880 1626 aa5.06□□□□□ -1.6
NF1-220ENST00000581113 RNF8O76064 485 aa5.06□□□□□ -1.6
NF1-220ENST00000581113 CER1O95813 267 aa5.06□□□□□ -1.6
NF1-220ENST00000581113 SLC3A2P08195 630 aaKnown RBP5.06□□□□□ -1.6
NF1-220ENST00000581113 TRAPPC10P48553 1259 aa5.06□□□□□ -1.6
NF1-220ENST00000581113 BLMHQ13867 455 aa5.06□□□□□ -1.6
NF1-220ENST00000581113 CBFBQ13951 182 aa5.06□□□□□ -1.6
NF1-220ENST00000581113 CCDC174Q6PII3 467 aa5.06□□□□□ -1.6
NF1-220ENST00000581113 ZNF66Q6ZN08 573 aa5.06□□□□□ -1.6
NF1-220ENST00000581113 SLC22A17Q8WUG5 538 aa5.06□□□□□ -1.6
NF1-220ENST00000581113 MCRS1Q96EZ8 462 aa5.06□□□□□ -1.6
NF1-220ENST00000581113 HIC2Q96JB3 615 aa5.06□□□□□ -1.6
NF1-220ENST00000581113 RMDN3Q96TC7 470 aa5.06□□□□□ -1.6
NF1-220ENST00000581113 ARPC5LQ9BPX5 153 aa5.06□□□□□ -1.6
NF1-220ENST00000581113 SH2D3AQ9BRG2 576 aa5.06□□□□□ -1.6
NF1-220ENST00000581113 KATNAL1Q9BW62 490 aa5.06□□□□□ -1.6
NF1-220ENST00000581113 GAR1Q9NY12 217 aaKnown RBP5.06□□□□□ -1.6
NF1-220ENST00000581113 DACT1Q9NYF0 836 aa5.06□□□□□ -1.6
NF1-220ENST00000581113 UBE2J1Q9Y385 318 aaPredicted RBP5.06□□□□□ -1.6
NF1-220ENST00000581113 PCDHB7Q9Y5E2 793 aa5.06□□□□□ -1.6
NF1-220ENST00000581113 M0QZQ0 153 aa5.05□□□□□ -1.6
NF1-220ENST00000581113 SYT5O00445 386 aa5.05□□□□□ -1.6
NF1-220ENST00000581113 ACKR2O00590 384 aa5.05□□□□□ -1.6
NF1-220ENST00000581113 CSTBP04080 98 aaKnown RBP5.05□□□□□ -1.6
NF1-220ENST00000581113 ITGA2BP08514 1039 aa5.05□□□□□ -1.6
NF1-220ENST00000581113 GYS1P13807 737 aa5.05□□□□□ -1.6
NF1-220ENST00000581113 MATN1P21941 496 aa5.05□□□□□ -1.6
NF1-220ENST00000581113 DUSP1P28562 367 aa5.05□□□□□ -1.6
NF1-220ENST00000581113 MPGP29372 298 aa5.05□□□□□ -1.6
NF1-220ENST00000581113 SRSF4Q08170 494 aaKnown RBP5.05□□□□□ -1.6
NF1-220ENST00000581113 KPNB1Q14974 876 aaKnown RBP5.05□□□□□ -1.6
NF1-220ENST00000581113 CNGA3Q16281 694 aa5.05□□□□□ -1.6
NF1-220ENST00000581113 CEP78Q5JTW2 689 aa5.05□□□□□ -1.6
NF1-220ENST00000581113 ACSM6Q6P461 480 aa5.05□□□□□ -1.6
NF1-220ENST00000581113 C8orf58Q8NAV2 365 aa5.05□□□□□ -1.6
NF1-220ENST00000581113 OR52L2PQ8NGH6 319 aa5.05□□□□□ -1.6
NF1-220ENST00000581113 LTV1Q96GA3 475 aaPredicted RBP5.05□□□□□ -1.6
NF1-220ENST00000581113 TP63Q9H3D4 680 aaPredicted RBP5.05□□□□□ -1.6
NF1-220ENST00000581113 PDGFCQ9NRA1 345 aa5.05□□□□□ -1.6
NF1-220ENST00000581113 RXFP3Q9NSD7 469 aa5.05□□□□□ -1.6
NF1-220ENST00000581113 HEMK1Q9Y5R4 338 aaPredicted RBP5.05□□□□□ -1.6
NF1-220ENST00000581113 PBRM1Q86U86 1689 aa5.05□□□□□ -1.6
NF1-220ENST00000581113 BIVM-ERCC5R4GMW8 1640 aa5.05□□□□□ -1.6
NF1-220ENST00000581113 FHAD1B1AJZ9 1412 aa5.04□□□□□ -1.6
NF1-220ENST00000581113 RPP40O75818 363 aaKnown RBP5.04□□□□□ -1.6
NF1-220ENST00000581113 CHKAP35790 457 aa5.04□□□□□ -1.6
NF1-220ENST00000581113 SERPINF1P36955 418 aa5.04□□□□□ -1.6
NF1-220ENST00000581113 C21orf58P58505 322 aa5.04□□□□□ -1.6
NF1-220ENST00000581113 MRPS21P82921 87 aaKnown RBP5.04□□□□□ -1.6
NF1-220ENST00000581113 ZNF268Q14587 947 aaPredicted RBP5.04□□□□□ -1.6
NF1-220ENST00000581113 PFKFB3Q16875 520 aaPredicted RBP5.04□□□□□ -1.6
NF1-220ENST00000581113 BTBD16Q32M84 506 aa5.04□□□□□ -1.6
NF1-220ENST00000581113 TUBB8Q3ZCM7 444 aa5.04□□□□□ -1.6
NF1-220ENST00000581113 ANKRD40Q6AI12 368 aa5.04□□□□□ -1.6
NF1-220ENST00000581113 MIS18BP1Q6P0N0 1132 aa5.04□□□□□ -1.6
NF1-220ENST00000581113 C16orf89Q6UX73 402 aa5.04□□□□□ -1.6
NF1-220ENST00000581113 OR1N1Q8NGS0 311 aa5.04□□□□□ -1.6
NF1-220ENST00000581113 PNISRQ8TF01 805 aaKnown RBP5.04□□□□□ -1.6
NF1-220ENST00000581113 GLMPQ8WWB7 406 aa5.04□□□□□ -1.6
NF1-220ENST00000581113 NPIPB3Q92617 1050 aa5.04□□□□□ -1.6
NF1-220ENST00000581113 AKAP1Q92667 903 aaKnown RBP eCLIP5.04□□□□□ -1.6
NF1-220ENST00000581113 FAR2Q96K12 515 aa5.04□□□□□ -1.6
NF1-220ENST00000581113 NUAK2Q9H093 628 aa5.04□□□□□ -1.6
NF1-220ENST00000581113 CDCP1Q9H5V8 836 aa5.04□□□□□ -1.6
NF1-220ENST00000581113 MYH16Q9H6N6 1097 aa5.04□□□□□ -1.6
NF1-220ENST00000581113 ARL8BQ9NVJ2 186 aa5.04□□□□□ -1.6
NF1-220ENST00000581113 FLRT1Q9NZU1 646 aa5.04□□□□□ -1.6
NF1-220ENST00000581113 MAFFQ9ULX9 164 aa5.04□□□□□ -1.6
NF1-220ENST00000581113 FRMD4BQ9Y2L6 1034 aa5.04□□□□□ -1.6
NF1-220ENST00000581113 GRIN2AQ12879 1464 aa5.04□□□□□ -1.6
NF1-220ENST00000581113 WDR17Q8IZU2 1322 aa5.03□□□□□ -1.6
NF1-220ENST00000581113 ADAMTS12P58397 1594 aa5.03□□□□□ -1.6
NF1-220ENST00000581113 TTC34A8MYJ7 566 aa5.03□□□□□ -1.6
NF1-220ENST00000581113 KIF28PB7ZC32 967 aa5.03□□□□□ -1.6
NF1-220ENST00000581113 M0QYT0 321 aa5.03□□□□□ -1.6
NF1-220ENST00000581113 OVOL3O00110 214 aa5.03□□□□□ -1.6
NF1-220ENST00000581113 LATS1O95835 1130 aa5.03□□□□□ -1.6
NF1-220ENST00000581113 TUBB4AP04350 444 aa5.03□□□□□ -1.6
NF1-220ENST00000581113 CERS1P27544 350 aa5.03□□□□□ -1.6
NF1-220ENST00000581113 EPHB2P29323 1055 aa5.03□□□□□ -1.6
NF1-220ENST00000581113 THBS4P35443 961 aa5.03□□□□□ -1.6
NF1-220ENST00000581113 VPS41P49754 854 aa5.03□□□□□ -1.6
NF1-220ENST00000581113 FOXF2Q12947 444 aa5.03□□□□□ -1.6
NF1-220ENST00000581113 GAB1Q13480 694 aa5.03□□□□□ -1.6
NF1-220ENST00000581113 SEC23BQ15437 767 aa5.03□□□□□ -1.6
NF1-220ENST00000581113 FAM83BQ5T0W9 1011 aa5.03□□□□□ -1.6
NF1-220ENST00000581113 LIN54Q6MZP7 749 aa5.03□□□□□ -1.6
NF1-220ENST00000581113 KLHL17Q6TDP4 642 aa5.03□□□□□ -1.6
NF1-220ENST00000581113 KYAT3Q6YP21 454 aaKnown RBP5.03□□□□□ -1.6
NF1-220ENST00000581113 TRABD2AQ86V40 505 aa5.03□□□□□ -1.6
NF1-220ENST00000581113 OSR1Q8TAX0 266 aaPredicted RBP5.03□□□□□ -1.6
NF1-220ENST00000581113 PAAF1Q9BRP4 392 aa5.03□□□□□ -1.6
NF1-220ENST00000581113 RTKNQ9BST9 563 aa5.03□□□□□ -1.6
NF1-220ENST00000581113 ELOVL1Q9BW60 279 aa5.03□□□□□ -1.6
NF1-220ENST00000581113 RNF26Q9BY78 433 aaPredicted RBP5.03□□□□□ -1.6
NF1-220ENST00000581113 CCDC134Q9H6E4 229 aa5.03□□□□□ -1.6
NF1-220ENST00000581113 PTPRHQ9HD43 1115 aa5.03□□□□□ -1.6
NF1-220ENST00000581113 KLHL13Q9P2N7 655 aa5.03□□□□□ -1.6
NF1-220ENST00000581113 NUP160Q12769 1436 aa5.03□□□□□ -1.6
NF1-220ENST00000581113 SPATA31A1Q5TZJ5 1347 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms