RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 I6L893 689 aaPredicted RBP13.15□□□□□ -0.3
CDK5RAP3-217ENST00000580287 ARHGEF15O94989 841 aa13.15□□□□□ -0.3
CDK5RAP3-217ENST00000580287 NUDT17P0C025 328 aa13.15□□□□□ -0.3
CDK5RAP3-217ENST00000580287 CHN1P15882 459 aa13.15□□□□□ -0.3
CDK5RAP3-217ENST00000580287 KDELR1P24390 212 aa13.15□□□□□ -0.3
CDK5RAP3-217ENST00000580287 CDKN2BP42772 138 aa13.15□□□□□ -0.3
CDK5RAP3-217ENST00000580287 CDH6P55285 790 aa13.15□□□□□ -0.3
CDK5RAP3-217ENST00000580287 LRRC14Q15048 493 aa13.15□□□□□ -0.3
CDK5RAP3-217ENST00000580287 SPDYCQ5MJ68 293 aa13.15□□□□□ -0.3
CDK5RAP3-217ENST00000580287 C9orf50Q5SZB4 431 aa13.15□□□□□ -0.3
CDK5RAP3-217ENST00000580287 CMTR2Q8IYT2 770 aaKnown RBP13.15□□□□□ -0.3
CDK5RAP3-217ENST00000580287 RNF168Q8IYW5 571 aaPredicted RBP13.15□□□□□ -0.3
CDK5RAP3-217ENST00000580287 CCDC33Q8N5R6 958 aa13.15□□□□□ -0.3
CDK5RAP3-217ENST00000580287 CCDC89Q8N998 374 aa13.15□□□□□ -0.3
CDK5RAP3-217ENST00000580287 NETO2Q8NC67 525 aa13.15□□□□□ -0.3
CDK5RAP3-217ENST00000580287 MGARPQ8TDB4 240 aa13.15□□□□□ -0.3
CDK5RAP3-217ENST00000580287 SNRNP25Q9BV90 132 aaKnown RBP13.15□□□□□ -0.3
CDK5RAP3-217ENST00000580287 ALG13Q9NP73 1137 aaKnown RBP13.15□□□□□ -0.3
CDK5RAP3-217ENST00000580287 SPG21Q9NZD8 308 aa13.15□□□□□ -0.3
CDK5RAP3-217ENST00000580287 MAGED2Q9UNF1 606 aaPredicted RBP13.15□□□□□ -0.3
CDK5RAP3-217ENST00000580287 USP3Q9Y6I4 520 aa13.15□□□□□ -0.3
CDK5RAP3-217ENST00000580287 DPYSL4O14531 572 aa13.15□□□□□ -0.3
CDK5RAP3-217ENST00000580287 EFCAB14O75071 495 aa13.15□□□□□ -0.3
CDK5RAP3-217ENST00000580287 SEC24AO95486 1093 aa13.15□□□□□ -0.3
CDK5RAP3-217ENST00000580287 IFNB1P01574 187 aa13.15□□□□□ -0.3
CDK5RAP3-217ENST00000580287 SOD2P04179 222 aa13.15□□□□□ -0.3
CDK5RAP3-217ENST00000580287 PCK1P35558 622 aa13.15□□□□□ -0.3
CDK5RAP3-217ENST00000580287 BYSLQ13895 437 aaKnown RBP13.15□□□□□ -0.3
CDK5RAP3-217ENST00000580287 P3H1Q32P28 736 aa13.15□□□□□ -0.3
CDK5RAP3-217ENST00000580287 SLC25A52Q3SY17 297 aa13.15□□□□□ -0.3
CDK5RAP3-217ENST00000580287 HP1BP3Q5SSJ5 553 aaPredicted RBP13.15□□□□□ -0.3
CDK5RAP3-217ENST00000580287 EMC10Q5UCC4 262 aa13.15□□□□□ -0.3
CDK5RAP3-217ENST00000580287 LRRC38Q5VT99 294 aa13.15□□□□□ -0.3
CDK5RAP3-217ENST00000580287 IZUMO3Q5VZ72 239 aa13.15□□□□□ -0.3
CDK5RAP3-217ENST00000580287 SYDE1Q6ZW31 735 aaPredicted RBP13.15□□□□□ -0.3
CDK5RAP3-217ENST00000580287 SCD5Q86SK9 330 aa13.15□□□□□ -0.3
CDK5RAP3-217ENST00000580287 ADAM7Q9H2U9 754 aa13.15□□□□□ -0.3
CDK5RAP3-217ENST00000580287 MTRRQ9UBK8 725 aa13.15□□□□□ -0.3
CDK5RAP3-217ENST00000580287 SFMBT1Q9UHJ3 866 aa13.15□□□□□ -0.3
CDK5RAP3-217ENST00000580287 SLC4A7Q9Y6M7 1214 aa13.15□□□□□ -0.3
CDK5RAP3-217ENST00000580287 ALPK3Q96L96 1907 aa13.15□□□□□ -0.3
CDK5RAP3-217ENST00000580287 REV3LO60673 3130 aa13.14□□□□□ -0.31
CDK5RAP3-217ENST00000580287 A0A1W2PQH9 124 aa13.14□□□□□ -0.31
CDK5RAP3-217ENST00000580287 FGF18O76093 207 aa13.14□□□□□ -0.31
CDK5RAP3-217ENST00000580287 TBX18O95935 607 aa13.14□□□□□ -0.31
CDK5RAP3-217ENST00000580287 ZSCAN5DPP0CG00 497 aa13.14□□□□□ -0.31
CDK5RAP3-217ENST00000580287 ATP2A2P16615 1042 aaKnown RBP13.14□□□□□ -0.31
CDK5RAP3-217ENST00000580287 NOS2P35228 1153 aa13.14□□□□□ -0.31
CDK5RAP3-217ENST00000580287 KYNUQ16719 465 aa13.14□□□□□ -0.31
CDK5RAP3-217ENST00000580287 TFDP3Q5H9I0 405 aa13.14□□□□□ -0.31
CDK5RAP3-217ENST00000580287 PM20D1Q6GTS8 502 aa13.14□□□□□ -0.31
CDK5RAP3-217ENST00000580287 HERC6Q8IVU3 1022 aa13.14□□□□□ -0.31
CDK5RAP3-217ENST00000580287 FIBCD1Q8N539 461 aa13.14□□□□□ -0.31
CDK5RAP3-217ENST00000580287 KLHL23Q8NBE8 558 aa13.14□□□□□ -0.31
CDK5RAP3-217ENST00000580287 CMASQ8NFW8 434 aaPredicted RBP13.14□□□□□ -0.31
CDK5RAP3-217ENST00000580287 CENPIQ92674 756 aaPredicted RBP13.14□□□□□ -0.31
CDK5RAP3-217ENST00000580287 NPY6RQ99463 290 aa13.14□□□□□ -0.31
CDK5RAP3-217ENST00000580287 AAASQ9NRG9 546 aa13.14□□□□□ -0.31
CDK5RAP3-217ENST00000580287 SNX10Q9Y5X0 201 aa13.14□□□□□ -0.31
CDK5RAP3-217ENST00000580287 hCG_1818297A0A087WSY0 165 aa13.14□□□□□ -0.31
CDK5RAP3-217ENST00000580287 RASGRF2O14827 1237 aa13.14□□□□□ -0.31
CDK5RAP3-217ENST00000580287 MSI1O43347 362 aaKnown RBP13.14□□□□□ -0.31
CDK5RAP3-217ENST00000580287 TLL1O43897 1013 aa13.14□□□□□ -0.31
CDK5RAP3-217ENST00000580287 DAB1O75553 588 aa13.14□□□□□ -0.31
CDK5RAP3-217ENST00000580287 FBXO21O94952 628 aa13.14□□□□□ -0.31
CDK5RAP3-217ENST00000580287 KRT7P08729 469 aa13.14□□□□□ -0.31
CDK5RAP3-217ENST00000580287 ETS1P14921 441 aa13.14□□□□□ -0.31
CDK5RAP3-217ENST00000580287 IL4RP24394 825 aa13.14□□□□□ -0.31
CDK5RAP3-217ENST00000580287 IVDP26440 423 aa13.14□□□□□ -0.31
CDK5RAP3-217ENST00000580287 PTPN9P43378 593 aa13.14□□□□□ -0.31
CDK5RAP3-217ENST00000580287 MICALCLQ6ZW33 695 aa13.14□□□□□ -0.31
CDK5RAP3-217ENST00000580287 GLIS1Q8NBF1 620 aa13.14□□□□□ -0.31
CDK5RAP3-217ENST00000580287 SLC2A13Q96QE2 648 aa13.14□□□□□ -0.31
CDK5RAP3-217ENST00000580287 DHX35Q9H5Z1 703 aaKnown RBP13.14□□□□□ -0.31
CDK5RAP3-217ENST00000580287 DDIT4Q9NX09 232 aa13.14□□□□□ -0.31
CDK5RAP3-217ENST00000580287 DDX56Q9NY93 547 aaKnown RBP13.14□□□□□ -0.31
CDK5RAP3-217ENST00000580287 GGT7Q9UJ14 662 aa13.14□□□□□ -0.31
CDK5RAP3-217ENST00000580287 PDE4DIPQ5VU43 2346 aa13.14□□□□□ -0.31
CDK5RAP3-217ENST00000580287 CCDC85CA6NKD9 419 aa13.13□□□□□ -0.31
CDK5RAP3-217ENST00000580287 H7C4K7 107 aa13.13□□□□□ -0.31
CDK5RAP3-217ENST00000580287 SGK1O00141 431 aa13.13□□□□□ -0.31
CDK5RAP3-217ENST00000580287 MDM4O15151 490 aa13.13□□□□□ -0.31
CDK5RAP3-217ENST00000580287 LIASO43766 372 aa13.13□□□□□ -0.31
CDK5RAP3-217ENST00000580287 CST8O60676 142 aa13.13□□□□□ -0.31
CDK5RAP3-217ENST00000580287 LAG3P18627 525 aa13.13□□□□□ -0.31
CDK5RAP3-217ENST00000580287 ATF6P18850 670 aa13.13□□□□□ -0.31
CDK5RAP3-217ENST00000580287 DEUP1Q05D60 604 aa13.13□□□□□ -0.31
CDK5RAP3-217ENST00000580287 ACAP1Q15027 740 aa13.13□□□□□ -0.31
CDK5RAP3-217ENST00000580287 SLC8B1Q6J4K2 584 aa13.13□□□□□ -0.31
CDK5RAP3-217ENST00000580287 NPNTQ6UXI9 565 aa13.13□□□□□ -0.31
CDK5RAP3-217ENST00000580287 POLNQ7Z5Q5 900 aa13.13□□□□□ -0.31
CDK5RAP3-217ENST00000580287 YTHDF3Q7Z739 585 aaKnown RBP13.13□□□□□ -0.31
CDK5RAP3-217ENST00000580287 NUP93Q8N1F7 819 aa13.13□□□□□ -0.31
CDK5RAP3-217ENST00000580287 TAB3Q8N5C8 712 aaPredicted RBP13.13□□□□□ -0.31
CDK5RAP3-217ENST00000580287 TLCD1Q96CP7 247 aa13.13□□□□□ -0.31
CDK5RAP3-217ENST00000580287 FUBP3Q96I24 572 aaKnown RBP eCLIP13.13□□□□□ -0.31
CDK5RAP3-217ENST00000580287 TMEM121Q9BTD3 319 aa13.13□□□□□ -0.31
CDK5RAP3-217ENST00000580287 GMIPQ9P107 970 aa13.13□□□□□ -0.31
CDK5RAP3-217ENST00000580287 INSL6Q9Y581 213 aa13.13□□□□□ -0.31
CDK5RAP3-217ENST00000580287 GLUD2P49448 558 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms