RNA–Protein interactions for RNA: ENST00000580108.1

DDX42-211, Transcript of DEAD-box helicase 42, humanhuman

TSL 3

Gene DDX42, Length 545 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-211ENST00000580108 PHF19Q5T6S3 580 aa4.33□□□□□ -1.72
DDX42-211ENST00000580108 KIAA1841Q6NSI8 718 aa4.33□□□□□ -1.72
DDX42-211ENST00000580108 SFR1Q86XK3 245 aa4.33□□□□□ -1.72
DDX42-211ENST00000580108 PROSER1Q86XN7 944 aa4.33□□□□□ -1.72
DDX42-211ENST00000580108 PPIL6Q8IXY8 311 aa4.33□□□□□ -1.72
DDX42-211ENST00000580108 KBTBD2Q8IY47 623 aa4.33□□□□□ -1.72
DDX42-211ENST00000580108 EXOC8Q8IYI6 725 aa4.33□□□□□ -1.72
DDX42-211ENST00000580108 SYT2Q8N9I0 419 aaPredicted RBP4.33□□□□□ -1.72
DDX42-211ENST00000580108 TMEM145Q8NBT3 493 aa4.33□□□□□ -1.72
DDX42-211ENST00000580108 TMEM161BQ8NDZ6 487 aa4.33□□□□□ -1.72
DDX42-211ENST00000580108 CNNM3Q8NE01 707 aa4.33□□□□□ -1.72
DDX42-211ENST00000580108 PRSS33Q8NF86 280 aa4.33□□□□□ -1.72
DDX42-211ENST00000580108 ING5Q8WYH8 240 aa4.33□□□□□ -1.72
DDX42-211ENST00000580108 SMG7Q92540 1137 aaKnown RBP4.33□□□□□ -1.72
DDX42-211ENST00000580108 EDAQ92838 391 aa4.33□□□□□ -1.72
DDX42-211ENST00000580108 KIFAP3Q92845 792 aa4.33□□□□□ -1.72
DDX42-211ENST00000580108 HPS3Q969F9 1004 aa4.33□□□□□ -1.72
DDX42-211ENST00000580108 PPP1R10Q96QC0 940 aaKnown RBP4.33□□□□□ -1.72
DDX42-211ENST00000580108 USP28Q96RU2 1077 aa4.33□□□□□ -1.72
DDX42-211ENST00000580108 CLSTN3Q9BQT9 956 aa4.33□□□□□ -1.72
DDX42-211ENST00000580108 REEP2Q9BRK0 252 aa4.33□□□□□ -1.72
DDX42-211ENST00000580108 RPP25Q9BUL9 199 aaKnown RBP4.33□□□□□ -1.72
DDX42-211ENST00000580108 COLEC11Q9BWP8 271 aa4.33□□□□□ -1.72
DDX42-211ENST00000580108 TGIF2Q9GZN2 237 aa4.33□□□□□ -1.72
DDX42-211ENST00000580108 TMEM168Q9H0V1 697 aa4.33□□□□□ -1.72
DDX42-211ENST00000580108 MEGF9Q9H1U4 602 aa4.33□□□□□ -1.72
DDX42-211ENST00000580108 C2orf40Q9H1Z8 148 aa4.33□□□□□ -1.72
DDX42-211ENST00000580108 ZHX3Q9H4I2 956 aa4.33□□□□□ -1.72
DDX42-211ENST00000580108 L2HGDHQ9H9P8 463 aa4.33□□□□□ -1.72
DDX42-211ENST00000580108 UPF2Q9HAU5 1272 aaKnown RBP4.33□□□□□ -1.72
DDX42-211ENST00000580108 PTPRHQ9HD43 1115 aa4.33□□□□□ -1.72
DDX42-211ENST00000580108 MRPL17Q9NRX2 175 aaKnown RBP4.33□□□□□ -1.72
DDX42-211ENST00000580108 HCFC1R1Q9NWW0 138 aa4.33□□□□□ -1.72
DDX42-211ENST00000580108 TBC1D7Q9P0N9 293 aa4.33□□□□□ -1.72
DDX42-211ENST00000580108 KIAA1522Q9P206 1035 aaPredicted RBP4.33□□□□□ -1.72
DDX42-211ENST00000580108 ARHGAP28Q9P2N2 729 aa4.33□□□□□ -1.72
DDX42-211ENST00000580108 FBXO2Q9UK22 296 aaPredicted RBP4.33□□□□□ -1.72
DDX42-211ENST00000580108 CROTQ9UKG9 612 aa4.33□□□□□ -1.72
DDX42-211ENST00000580108 DNM3Q9UQ16 869 aa4.33□□□□□ -1.72
DDX42-211ENST00000580108 FAM50BQ9Y247 325 aa4.33□□□□□ -1.72
DDX42-211ENST00000580108 COA3Q9Y2R0 106 aaPredicted RBP4.33□□□□□ -1.72
DDX42-211ENST00000580108 TICRRQ7Z2Z1 1910 aa4.33□□□□□ -1.72
DDX42-211ENST00000580108 OBSL1O75147 1896 aa4.32□□□□□ -1.72
DDX42-211ENST00000580108 SMIM28A0A1B0GU29 152 aa4.32□□□□□ -1.72
DDX42-211ENST00000580108 NPEPPSL1A6NEC2 478 aa4.32□□□□□ -1.72
DDX42-211ENST00000580108 MYMKA6NI61 221 aa4.32□□□□□ -1.72
DDX42-211ENST00000580108 LACTBL1A8MY62 500 aa4.32□□□□□ -1.72
DDX42-211ENST00000580108 K7ENM7 598 aa4.32□□□□□ -1.72
DDX42-211ENST00000580108 PODXLO00592 558 aa4.32□□□□□ -1.72
DDX42-211ENST00000580108 EIF5BO60841 1220 aaKnown RBP4.32□□□□□ -1.72
DDX42-211ENST00000580108 TADA2AO75478 443 aa4.32□□□□□ -1.72
DDX42-211ENST00000580108 SEC24AO95486 1093 aa4.32□□□□□ -1.72
DDX42-211ENST00000580108 THP07101 528 aa4.32□□□□□ -1.72
DDX42-211ENST00000580108 OR4Q2P0C623 313 aa4.32□□□□□ -1.72
DDX42-211ENST00000580108 SRGAP2BP0DMP2 458 aa4.32□□□□□ -1.72
DDX42-211ENST00000580108 ALADP13716 330 aa4.32□□□□□ -1.72
DDX42-211ENST00000580108 HOXB8P17481 243 aaPredicted RBP4.32□□□□□ -1.72
DDX42-211ENST00000580108 ATF4P18848 351 aaPredicted RBP4.32□□□□□ -1.72
DDX42-211ENST00000580108 PROZP22891 400 aa4.32□□□□□ -1.72
DDX42-211ENST00000580108 OR1D2P34982 312 aa4.32□□□□□ -1.72
DDX42-211ENST00000580108 ACVRL1P37023 503 aa4.32□□□□□ -1.72
DDX42-211ENST00000580108 PLA2G5P39877 138 aa4.32□□□□□ -1.72
DDX42-211ENST00000580108 MTHFRP42898 656 aa4.32□□□□□ -1.72
DDX42-211ENST00000580108 MATR3P43243 847 aaKnown RBP eCLIP4.32□□□□□ -1.72
DDX42-211ENST00000580108 EFNA5P52803 228 aa4.32□□□□□ -1.72
DDX42-211ENST00000580108 ARPP19P56211 112 aa4.32□□□□□ -1.72
DDX42-211ENST00000580108 NCBP1Q09161 790 aaKnown RBP4.32□□□□□ -1.72
DDX42-211ENST00000580108 DMP1Q13316 513 aaPredicted RBP4.32□□□□□ -1.72
DDX42-211ENST00000580108 GIT2Q14161 759 aa4.32□□□□□ -1.72
DDX42-211ENST00000580108 NOLC1Q14978 699 aaKnown RBP eCLIP4.32□□□□□ -1.72
DDX42-211ENST00000580108 SURF1Q15526 300 aa4.32□□□□□ -1.72
DDX42-211ENST00000580108 CCDC142Q17RM4 750 aa4.32□□□□□ -1.72
DDX42-211ENST00000580108 USP41Q3LFD5 358 aa4.32□□□□□ -1.72
DDX42-211ENST00000580108 DCAF4L1Q3SXM0 396 aa4.32□□□□□ -1.72
DDX42-211ENST00000580108 CES5AQ6NT32 575 aa4.32□□□□□ -1.72
DDX42-211ENST00000580108 ZNF585AQ6P3V2 769 aa4.32□□□□□ -1.72
DDX42-211ENST00000580108 GET4Q7L5D6 327 aaPredicted RBP4.32□□□□□ -1.72
DDX42-211ENST00000580108 HAUS6Q7Z4H7 955 aa4.32□□□□□ -1.72
DDX42-211ENST00000580108 GRASPQ7Z6J2 395 aaPredicted RBP4.32□□□□□ -1.72
DDX42-211ENST00000580108 GPR149Q86SP6 731 aa4.32□□□□□ -1.72
DDX42-211ENST00000580108 PDILTQ8N807 584 aa4.32□□□□□ -1.72
DDX42-211ENST00000580108 STKLD1Q8NE28 680 aa4.32□□□□□ -1.72
DDX42-211ENST00000580108 NUDT10Q8NFP7 164 aa4.32□□□□□ -1.72
DDX42-211ENST00000580108 ITFG1Q8TB96 612 aa4.32□□□□□ -1.72
DDX42-211ENST00000580108 LNX1Q8TBB1 728 aaPredicted RBP4.32□□□□□ -1.72
DDX42-211ENST00000580108 RAD54LQ92698 747 aa4.32□□□□□ -1.72
DDX42-211ENST00000580108 KISS1RQ969F8 398 aaPredicted RBP4.32□□□□□ -1.72
DDX42-211ENST00000580108 BICD1Q96G01 975 aa4.32□□□□□ -1.72
DDX42-211ENST00000580108 NUDT11Q96G61 164 aa4.32□□□□□ -1.72
DDX42-211ENST00000580108 CDK5RAP3Q96JB5 506 aa4.32□□□□□ -1.72
DDX42-211ENST00000580108 SNX27Q96L92 541 aa4.32□□□□□ -1.72
DDX42-211ENST00000580108 DRC1Q96MC2 740 aa4.32□□□□□ -1.72
DDX42-211ENST00000580108 RIPOR3Q96MK2 946 aa4.32□□□□□ -1.72
DDX42-211ENST00000580108 TMEM209Q96SK2 561 aa4.32□□□□□ -1.72
DDX42-211ENST00000580108 FIZ1Q96SL8 496 aa4.32□□□□□ -1.72
DDX42-211ENST00000580108 ADPGKQ9BRR6 497 aa4.32□□□□□ -1.72
DDX42-211ENST00000580108 TCHPQ9BT92 498 aa4.32□□□□□ -1.72
DDX42-211ENST00000580108 TTPALQ9BTX7 342 aa4.32□□□□□ -1.72
DDX42-211ENST00000580108 ZNF747Q9BV97 191 aa4.32□□□□□ -1.72
DDX42-211ENST00000580108 MRPL4Q9BYD3 311 aaKnown RBP4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms