RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 TBX18O95935 607 aa16.76■□□□□ 0.27
VAPA-204ENST00000577901 SERPINF2P08697 491 aa16.76■□□□□ 0.27
VAPA-204ENST00000577901 CDK11BP21127 795 aaKnown RBP16.76■□□□□ 0.27
VAPA-204ENST00000577901 USP8P40818 1118 aa16.76■□□□□ 0.27
VAPA-204ENST00000577901 GFPT1Q06210 699 aaPredicted RBP16.76■□□□□ 0.27
VAPA-204ENST00000577901 ZNF33AQ06730 810 aa16.76■□□□□ 0.27
VAPA-204ENST00000577901 ARHGAP44Q17R89 818 aa16.76■□□□□ 0.27
VAPA-204ENST00000577901 SDE2Q6IQ49 451 aa16.76■□□□□ 0.27
VAPA-204ENST00000577901 GJB7Q6PEY0 223 aa16.76■□□□□ 0.27
VAPA-204ENST00000577901 PIP4P1Q86T03 277 aa16.76■□□□□ 0.27
VAPA-204ENST00000577901 TADA2BQ86TJ2 420 aa16.76■□□□□ 0.27
VAPA-204ENST00000577901 CHPFQ8IZ52 775 aa16.76■□□□□ 0.27
VAPA-204ENST00000577901 ARHGAP18Q8N392 663 aa16.76■□□□□ 0.27
VAPA-204ENST00000577901 XPO6Q96QU8 1125 aaKnown RBP16.76■□□□□ 0.27
VAPA-204ENST00000577901 ACOX2Q99424 681 aa16.76■□□□□ 0.27
VAPA-204ENST00000577901 BBS2Q9BXC9 721 aa16.76■□□□□ 0.27
VAPA-204ENST00000577901 KLF16Q9BXK1 252 aaPredicted RBP16.76■□□□□ 0.27
VAPA-204ENST00000577901 VPS16Q9H269 839 aa16.76■□□□□ 0.27
VAPA-204ENST00000577901 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.76■□□□□ 0.27
VAPA-204ENST00000577901 PLXND1Q9Y4D7 1925 aa16.76■□□□□ 0.27
VAPA-204ENST00000577901 MYOFQ9NZM1 2061 aa16.76■□□□□ 0.27
VAPA-204ENST00000577901 IGHV1OR15-9A0A0B4J2B8 117 aa16.75■□□□□ 0.27
VAPA-204ENST00000577901 A0A1W2PQH9 124 aa16.75■□□□□ 0.27
VAPA-204ENST00000577901 HYAL3O43820 417 aaPredicted RBP16.75■□□□□ 0.27
VAPA-204ENST00000577901 CACNG3O60359 315 aa16.75■□□□□ 0.27
VAPA-204ENST00000577901 ZNF217O75362 1048 aa16.75■□□□□ 0.27
VAPA-204ENST00000577901 RALAP11233 206 aa16.75■□□□□ 0.27
VAPA-204ENST00000577901 TYRP14679 529 aa16.75■□□□□ 0.27
VAPA-204ENST00000577901 NDUFV2P19404 249 aa16.75■□□□□ 0.27
VAPA-204ENST00000577901 BRD2P25440 801 aaKnown RBP16.75■□□□□ 0.27
VAPA-204ENST00000577901 ATP5C1P36542 298 aaKnown RBP16.75■□□□□ 0.27
VAPA-204ENST00000577901 PLA2G4AP47712 749 aa16.75■□□□□ 0.27
VAPA-204ENST00000577901 TKTL1P51854 596 aa16.75■□□□□ 0.27
VAPA-204ENST00000577901 SIM1P81133 766 aaPredicted RBP16.75■□□□□ 0.27
VAPA-204ENST00000577901 GOLGA8FQ08AF8 430 aa16.75■□□□□ 0.27
VAPA-204ENST00000577901 GOLGA8DPQ0D2H9 430 aa16.75■□□□□ 0.27
VAPA-204ENST00000577901 KRT31Q15323 416 aa16.75■□□□□ 0.27
VAPA-204ENST00000577901 ANO6Q4KMQ2 910 aa16.75■□□□□ 0.27
VAPA-204ENST00000577901 RAB41Q5JT25 222 aa16.75■□□□□ 0.27
VAPA-204ENST00000577901 FKBP15Q5T1M5 1219 aa16.75■□□□□ 0.27
VAPA-204ENST00000577901 RABEPKQ7Z6M1 372 aa16.75■□□□□ 0.27
VAPA-204ENST00000577901 IPO4Q8TEX9 1081 aaKnown RBP16.75■□□□□ 0.27
VAPA-204ENST00000577901 KCTD13Q8WZ19 329 aa16.75■□□□□ 0.27
VAPA-204ENST00000577901 ERLEC1Q96DZ1 483 aa16.75■□□□□ 0.27
VAPA-204ENST00000577901 CDK5RAP1Q96SZ6 601 aaKnown RBP16.75■□□□□ 0.27
VAPA-204ENST00000577901 CAPN10Q9HC96 672 aa16.75■□□□□ 0.27
VAPA-204ENST00000577901 CD248Q9HCU0 757 aa16.75■□□□□ 0.27
VAPA-204ENST00000577901 CYLDQ9NQC7 956 aa16.75■□□□□ 0.27
VAPA-204ENST00000577901 WDR35Q9P2L0 1181 aa16.75■□□□□ 0.27
VAPA-204ENST00000577901 NAGPAQ9UK23 515 aa16.75■□□□□ 0.27
VAPA-204ENST00000577901 LSM7Q9UK45 103 aaKnown RBP16.75■□□□□ 0.27
VAPA-204ENST00000577901 DNAJC12Q9UKB3 198 aa16.75■□□□□ 0.27
VAPA-204ENST00000577901 NEUROG3Q9Y4Z2 214 aa16.75■□□□□ 0.27
VAPA-204ENST00000577901 SMTNL1A8MU46 457 aa16.74■□□□□ 0.27
VAPA-204ENST00000577901 M0QYV0 167 aa16.74■□□□□ 0.27
VAPA-204ENST00000577901 ZBED1O96006 694 aa16.74■□□□□ 0.27
VAPA-204ENST00000577901 RARGP13631 454 aa16.74■□□□□ 0.27
VAPA-204ENST00000577901 APBA1Q02410 837 aa16.74■□□□□ 0.27
VAPA-204ENST00000577901 KCNMA1Q12791 1236 aa16.74■□□□□ 0.27
VAPA-204ENST00000577901 SKOR2Q2VWA4 1001 aaPredicted RBP16.74■□□□□ 0.27
VAPA-204ENST00000577901 PKDCCQ504Y2 493 aa16.74■□□□□ 0.27
VAPA-204ENST00000577901 TPGS1Q6ZTW0 290 aa16.74■□□□□ 0.27
VAPA-204ENST00000577901 TOGARAM2Q6ZUX3 1019 aa16.74■□□□□ 0.27
VAPA-204ENST00000577901 SIX6OS1Q8N1H7 587 aa16.74■□□□□ 0.27
VAPA-204ENST00000577901 SLC35F5Q8WV83 523 aa16.74■□□□□ 0.27
VAPA-204ENST00000577901 SHC3Q92529 594 aa16.74■□□□□ 0.27
VAPA-204ENST00000577901 GABRG3Q99928 467 aa16.74■□□□□ 0.27
VAPA-204ENST00000577901 BPIFA3Q9BQP9 254 aa16.74■□□□□ 0.27
VAPA-204ENST00000577901 ZSWIM1Q9BR11 485 aa16.74■□□□□ 0.27
VAPA-204ENST00000577901 NMUR1Q9HB89 426 aa16.74■□□□□ 0.27
VAPA-204ENST00000577901 SIX2Q9NPC8 291 aa16.74■□□□□ 0.27
VAPA-204ENST00000577901 OSER1Q9NX31 292 aa16.74■□□□□ 0.27
VAPA-204ENST00000577901 CLIC5Q9NZA1 410 aa16.74■□□□□ 0.27
VAPA-204ENST00000577901 MARK1Q9P0L2 795 aa16.74■□□□□ 0.27
VAPA-204ENST00000577901 CYP8B1Q9UNU6 501 aa16.74■□□□□ 0.27
VAPA-204ENST00000577901 PRRT4C9JH25 899 aa16.73■□□□□ 0.27
VAPA-204ENST00000577901 TULP2O00295 520 aa16.73■□□□□ 0.27
VAPA-204ENST00000577901 ARHGAP33O14559 1287 aa16.73■□□□□ 0.27
VAPA-204ENST00000577901 THAP12O43422 761 aa16.73■□□□□ 0.27
VAPA-204ENST00000577901 OPHN1O60890 802 aa16.73■□□□□ 0.27
VAPA-204ENST00000577901 GNA15P30679 374 aa16.73■□□□□ 0.27
VAPA-204ENST00000577901 PTK2Q05397 1052 aa16.73■□□□□ 0.27
VAPA-204ENST00000577901 KLHDC7AQ5VTJ3 777 aa16.73■□□□□ 0.27
VAPA-204ENST00000577901 PM20D1Q6GTS8 502 aa16.73■□□□□ 0.27
VAPA-204ENST00000577901 KLHDC10Q6PID8 442 aa16.73■□□□□ 0.27
VAPA-204ENST00000577901 SLC41A1Q8IVJ1 513 aa16.73■□□□□ 0.27
VAPA-204ENST00000577901 ZNF276Q8N554 614 aa16.73■□□□□ 0.27
VAPA-204ENST00000577901 MINDY1Q8N5J2 469 aa16.73■□□□□ 0.27
VAPA-204ENST00000577901 AOPEPQ8N6M6 819 aa16.73■□□□□ 0.27
VAPA-204ENST00000577901 ZNF606Q8WXB4 792 aa16.73■□□□□ 0.27
VAPA-204ENST00000577901 ZCCHC14Q8WYQ9 949 aaKnown RBP16.73■□□□□ 0.27
VAPA-204ENST00000577901 HSFY1Q96LI6 401 aa16.73■□□□□ 0.27
VAPA-204ENST00000577901 HSPA12BQ96MM6 686 aa16.73■□□□□ 0.27
VAPA-204ENST00000577901 ULBP1Q9BZM6 244 aa16.73■□□□□ 0.27
VAPA-204ENST00000577901 CNGB3Q9NQW8 809 aa16.73■□□□□ 0.27
VAPA-204ENST00000577901 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.73■□□□□ 0.27
VAPA-204ENST00000577901 LIMA1Q9UHB6 759 aaKnown RBP16.73■□□□□ 0.27
VAPA-204ENST00000577901 DNMT3LQ9UJW3 386 aa16.73■□□□□ 0.27
VAPA-204ENST00000577901 KLK13Q9UKR3 277 aa16.73■□□□□ 0.27
VAPA-204ENST00000577901 MSRB2Q9Y3D2 182 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms