RNA–Protein interactions for RNA: ENST00000576958.1

PRPF8-215, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 416 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-215ENST00000576958 GUF1Q8N442 669 aaKnown RBP12.59□□□□□ -0.39
PRPF8-215ENST00000576958 UBR7Q8N806 425 aa12.59□□□□□ -0.39
PRPF8-215ENST00000576958 CEP76Q8TAP6 659 aa12.59□□□□□ -0.39
PRPF8-215ENST00000576958 DDI1Q8WTU0 396 aa12.59□□□□□ -0.39
PRPF8-215ENST00000576958 IMPG2Q9BZV3 1241 aa12.59□□□□□ -0.39
PRPF8-215ENST00000576958 ITM2CQ9NQX7 267 aa12.59□□□□□ -0.39
PRPF8-215ENST00000576958 RAB20Q9NX57 234 aa12.59□□□□□ -0.39
PRPF8-215ENST00000576958 ELOVL2Q9NXB9 296 aa12.59□□□□□ -0.39
PRPF8-215ENST00000576958 TSPAN16Q9UKR8 245 aa12.59□□□□□ -0.39
PRPF8-215ENST00000576958 BTBD3Q9Y2F9 522 aa12.59□□□□□ -0.39
PRPF8-215ENST00000576958 MSRB2Q9Y3D2 182 aa12.59□□□□□ -0.39
PRPF8-215ENST00000576958 NEUROG3Q9Y4Z2 214 aa12.59□□□□□ -0.39
PRPF8-215ENST00000576958 SMG1Q96Q15 3661 aaKnown RBP12.59□□□□□ -0.39
PRPF8-215ENST00000576958 PTPRBP23467 1997 aa12.58□□□□□ -0.4
PRPF8-215ENST00000576958 BPTFQ12830 3046 aa12.58□□□□□ -0.4
PRPF8-215ENST00000576958 A0A1B0GVT2 93 aa12.58□□□□□ -0.4
PRPF8-215ENST00000576958 UPK3BL1B0FP48 263 aa12.58□□□□□ -0.4
PRPF8-215ENST00000576958 UPK3BL2E5RIL1 263 aa12.58□□□□□ -0.4
PRPF8-215ENST00000576958 RNF225M0QZC1 329 aaPredicted RBP12.58□□□□□ -0.4
PRPF8-215ENST00000576958 GFRA2O00451 464 aa12.58□□□□□ -0.4
PRPF8-215ENST00000576958 CBFA2T3O75081 653 aa12.58□□□□□ -0.4
PRPF8-215ENST00000576958 ZNF202O95125 648 aa12.58□□□□□ -0.4
PRPF8-215ENST00000576958 ZBED1O96006 694 aa12.58□□□□□ -0.4
PRPF8-215ENST00000576958 FTH1P19P0C7X4 201 aa12.58□□□□□ -0.4
PRPF8-215ENST00000576958 LCP1P13796 627 aa12.58□□□□□ -0.4
PRPF8-215ENST00000576958 SLC6A4P31645 630 aa12.58□□□□□ -0.4
PRPF8-215ENST00000576958 HOXD12P35452 270 aa12.58□□□□□ -0.4
PRPF8-215ENST00000576958 CLDN6P56747 220 aa12.58□□□□□ -0.4
PRPF8-215ENST00000576958 TRIP6Q15654 476 aaKnown RBP12.58□□□□□ -0.4
PRPF8-215ENST00000576958 PTPRNQ16849 979 aa12.58□□□□□ -0.4
PRPF8-215ENST00000576958 ARHGAP17Q68EM7 881 aa12.58□□□□□ -0.4
PRPF8-215ENST00000576958 ATL3Q6DD88 541 aa12.58□□□□□ -0.4
PRPF8-215ENST00000576958 ISM2Q6H9L7 571 aa12.58□□□□□ -0.4
PRPF8-215ENST00000576958 ANKS1BQ7Z6G8 1248 aa12.58□□□□□ -0.4
PRPF8-215ENST00000576958 FAM217AQ8IXS0 508 aa12.58□□□□□ -0.4
PRPF8-215ENST00000576958 FBXL13Q8NEE6 735 aa12.58□□□□□ -0.4
PRPF8-215ENST00000576958 C1orf216Q8TAB5 229 aa12.58□□□□□ -0.4
PRPF8-215ENST00000576958 SIPA1Q96FS4 1042 aa12.58□□□□□ -0.4
PRPF8-215ENST00000576958 ABCB8Q9NUT2 735 aa12.58□□□□□ -0.4
PRPF8-215ENST00000576958 GOLGA8CPA6NN73 597 aa12.57□□□□□ -0.4
PRPF8-215ENST00000576958 CD19P15391 556 aa12.57□□□□□ -0.4
PRPF8-215ENST00000576958 CD70P32970 193 aa12.57□□□□□ -0.4
PRPF8-215ENST00000576958 CSNK1EP49674 416 aaKnown RBP12.57□□□□□ -0.4
PRPF8-215ENST00000576958 MCCD1P59942 119 aaPredicted RBP12.57□□□□□ -0.4
PRPF8-215ENST00000576958 KRT85P78386 507 aa12.57□□□□□ -0.4
PRPF8-215ENST00000576958 SCAPQ12770 1279 aa12.57□□□□□ -0.4
PRPF8-215ENST00000576958 TRIP4Q15650 581 aaPredicted RBP12.57□□□□□ -0.4
PRPF8-215ENST00000576958 PREPLQ4J6C6 727 aaPredicted RBP12.57□□□□□ -0.4
PRPF8-215ENST00000576958 TCERG1LQ5VWI1 586 aa12.57□□□□□ -0.4
PRPF8-215ENST00000576958 ANKRD40Q6AI12 368 aa12.57□□□□□ -0.4
PRPF8-215ENST00000576958 PM20D1Q6GTS8 502 aa12.57□□□□□ -0.4
PRPF8-215ENST00000576958 NADSYN1Q6IA69 706 aa12.57□□□□□ -0.4
PRPF8-215ENST00000576958 MMS22LQ6ZRQ5 1243 aa12.57□□□□□ -0.4
PRPF8-215ENST00000576958 NUDT18Q6ZVK8 323 aa12.57□□□□□ -0.4
PRPF8-215ENST00000576958 ADIPOR2Q86V24 386 aa12.57□□□□□ -0.4
PRPF8-215ENST00000576958 ANKRD52Q8NB46 1076 aa12.57□□□□□ -0.4
PRPF8-215ENST00000576958 MDM1Q8TC05 714 aa12.57□□□□□ -0.4
PRPF8-215ENST00000576958 DNASE2BQ8WZ79 361 aa12.57□□□□□ -0.4
PRPF8-215ENST00000576958 SNX19Q92543 992 aa12.57□□□□□ -0.4
PRPF8-215ENST00000576958 GAREM1Q9H706 876 aa12.57□□□□□ -0.4
PRPF8-215ENST00000576958 TOR4AQ9NXH8 423 aa12.57□□□□□ -0.4
PRPF8-215ENST00000576958 SERGEFQ9UGK8 458 aa12.57□□□□□ -0.4
PRPF8-215ENST00000576958 USP25Q9UHP3 1055 aa12.57□□□□□ -0.4
PRPF8-215ENST00000576958 PLXNA2O75051 1894 aa12.57□□□□□ -0.4
PRPF8-215ENST00000576958 TP53BP1Q12888 1972 aaPredicted RBP12.56□□□□□ -0.4
PRPF8-215ENST00000576958 METTL12A8MUP2 240 aa12.56□□□□□ -0.4
PRPF8-215ENST00000576958 O00370 1275 aa12.56□□□□□ -0.4
PRPF8-215ENST00000576958 SYNCRIPO60506 623 aaKnown RBP12.56□□□□□ -0.4
PRPF8-215ENST00000576958 ATXN1LP0C7T5 689 aaKnown RBP12.56□□□□□ -0.4
PRPF8-215ENST00000576958 CD44P16070 742 aaKnown RBP12.56□□□□□ -0.4
PRPF8-215ENST00000576958 COG7P83436 770 aa12.56□□□□□ -0.4
PRPF8-215ENST00000576958 IL9RQ01113 521 aa12.56□□□□□ -0.4
PRPF8-215ENST00000576958 CUL2Q13617 745 aa12.56□□□□□ -0.4
PRPF8-215ENST00000576958 STARD3Q14849 445 aa12.56□□□□□ -0.4
PRPF8-215ENST00000576958 HLA-BQ31612 363 aa12.56□□□□□ -0.4
PRPF8-215ENST00000576958 PKDCCQ504Y2 493 aa12.56□□□□□ -0.4
PRPF8-215ENST00000576958 PRAMEF14Q5SWL7 426 aa12.56□□□□□ -0.4
PRPF8-215ENST00000576958 BSPRYQ5W0U4 402 aa12.56□□□□□ -0.4
PRPF8-215ENST00000576958 PMF1Q6P1K2 205 aa12.56□□□□□ -0.4
PRPF8-215ENST00000576958 SERPINA13PQ6UXR4 307 aa12.56□□□□□ -0.4
PRPF8-215ENST00000576958 CHST9Q7L1S5 443 aa12.56□□□□□ -0.4
PRPF8-215ENST00000576958 CPXM2Q8N436 756 aa12.56□□□□□ -0.4
PRPF8-215ENST00000576958 ZNF276Q8N554 614 aa12.56□□□□□ -0.4
PRPF8-215ENST00000576958 PRICKLE1Q96MT3 831 aaPredicted RBP12.56□□□□□ -0.4
PRPF8-215ENST00000576958 TMEM245Q9H330 911 aa12.56□□□□□ -0.4
PRPF8-215ENST00000576958 CAAP1Q9H8G2 361 aa12.56□□□□□ -0.4
PRPF8-215ENST00000576958 XPO7Q9UIA9 1087 aaKnown RBP12.56□□□□□ -0.4
PRPF8-215ENST00000576958 PCOLCE2Q9UKZ9 415 aa12.56□□□□□ -0.4
PRPF8-215ENST00000576958 SNX11Q9Y5W9 270 aa12.56□□□□□ -0.4
PRPF8-215ENST00000576958 A0A1B0GTW7 788 aa12.55□□□□□ -0.4
PRPF8-215ENST00000576958 FAM149AA5PLN7 773 aa12.55□□□□□ -0.4
PRPF8-215ENST00000576958 WNT9AO14904 365 aa12.55□□□□□ -0.4
PRPF8-215ENST00000576958 XPO1O14980 1071 aaKnown RBP12.55□□□□□ -0.4
PRPF8-215ENST00000576958 MYL1P05976 194 aa12.55□□□□□ -0.4
PRPF8-215ENST00000576958 SYPP08247 313 aa12.55□□□□□ -0.4
PRPF8-215ENST00000576958 BRD2P25440 801 aaKnown RBP12.55□□□□□ -0.4
PRPF8-215ENST00000576958 GTF2H1P32780 548 aa12.55□□□□□ -0.4
PRPF8-215ENST00000576958 CHKAP35790 457 aa12.55□□□□□ -0.4
PRPF8-215ENST00000576958 CTSOP43234 321 aaPredicted RBP12.55□□□□□ -0.4
PRPF8-215ENST00000576958 PSEN1P49768 467 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms