RNA–Protein interactions for RNA: ENST00000576862.5

NUP88-213, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-213ENST00000576862 M0QYT0 321 aa6.05□□□□□ -1.44
NUP88-213ENST00000576862 RPP40O75818 363 aaKnown RBP6.05□□□□□ -1.44
NUP88-213ENST00000576862 NDUFS1P28331 727 aa6.05□□□□□ -1.44
NUP88-213ENST00000576862 HOXD12P35452 270 aa6.05□□□□□ -1.44
NUP88-213ENST00000576862 STAT6P42226 847 aa6.05□□□□□ -1.44
NUP88-213ENST00000576862 AGTR2P50052 363 aa6.05□□□□□ -1.44
NUP88-213ENST00000576862 YPEL5P62699 121 aa6.05□□□□□ -1.44
NUP88-213ENST00000576862 PFKFB3Q16875 520 aaPredicted RBP6.05□□□□□ -1.44
NUP88-213ENST00000576862 ZACNQ401N2 412 aa6.05□□□□□ -1.44
NUP88-213ENST00000576862 KRT27Q7Z3Y8 459 aa6.05□□□□□ -1.44
NUP88-213ENST00000576862 TTC30AQ86WT1 665 aa6.05□□□□□ -1.44
NUP88-213ENST00000576862 LAS2Q8IYD9 372 aa6.05□□□□□ -1.44
NUP88-213ENST00000576862 OR4N4Q8N0Y3 316 aa6.05□□□□□ -1.44
NUP88-213ENST00000576862 P2RY11Q96G91 374 aa6.05□□□□□ -1.44
NUP88-213ENST00000576862 FAM118BQ9BPY3 351 aa6.05□□□□□ -1.44
NUP88-213ENST00000576862 TM2D2Q9BX73 214 aa6.05□□□□□ -1.44
NUP88-213ENST00000576862 FBXO28Q9NVF7 368 aa6.05□□□□□ -1.44
NUP88-213ENST00000576862 ASNSD1Q9NWL6 643 aa6.05□□□□□ -1.44
NUP88-213ENST00000576862 MAFFQ9ULX9 164 aa6.05□□□□□ -1.44
NUP88-213ENST00000576862 BTBD3Q9Y2F9 522 aa6.05□□□□□ -1.44
NUP88-213ENST00000576862 UBE2J1Q9Y385 318 aaPredicted RBP6.05□□□□□ -1.44
NUP88-213ENST00000576862 HEMK1Q9Y5R4 338 aaPredicted RBP6.05□□□□□ -1.44
NUP88-213ENST00000576862 KCNU1A8MYU2 1149 aa6.04□□□□□ -1.44
NUP88-213ENST00000576862 F5H423 210 aaPredicted RBP6.04□□□□□ -1.44
NUP88-213ENST00000576862 SYT5O00445 386 aa6.04□□□□□ -1.44
NUP88-213ENST00000576862 DSCR3O14972 297 aa6.04□□□□□ -1.44
NUP88-213ENST00000576862 SKAP2O75563 359 aaPredicted RBP6.04□□□□□ -1.44
NUP88-213ENST00000576862 RNF8O76064 485 aa6.04□□□□□ -1.44
NUP88-213ENST00000576862 THBS4P35443 961 aa6.04□□□□□ -1.44
NUP88-213ENST00000576862 ZNF84P51523 738 aa6.04□□□□□ -1.44
NUP88-213ENST00000576862 CFHR1Q03591 330 aa6.04□□□□□ -1.44
NUP88-213ENST00000576862 AAK1Q2M2I8 961 aa6.04□□□□□ -1.44
NUP88-213ENST00000576862 RINT1Q6NUQ1 792 aa6.04□□□□□ -1.44
NUP88-213ENST00000576862 TRABD2AQ86V40 505 aa6.04□□□□□ -1.44
NUP88-213ENST00000576862 GATAD2AQ86YP4 633 aa6.04□□□□□ -1.44
NUP88-213ENST00000576862 NRSN1Q8IZ57 195 aa6.04□□□□□ -1.44
NUP88-213ENST00000576862 ASB12Q8WXK4 309 aa6.04□□□□□ -1.44
NUP88-213ENST00000576862 EID2BQ96D98 161 aa6.04□□□□□ -1.44
NUP88-213ENST00000576862 KATNAL1Q9BW62 490 aa6.04□□□□□ -1.44
NUP88-213ENST00000576862 SIRT4Q9Y6E7 314 aaPredicted RBP6.04□□□□□ -1.44
NUP88-213ENST00000576862 DCAF1Q9Y4B6 1507 aa6.04□□□□□ -1.44
NUP88-213ENST00000576862 E5RJQ4 531 aa6.03□□□□□ -1.44
NUP88-213ENST00000576862 KAT7O95251 611 aa6.03□□□□□ -1.44
NUP88-213ENST00000576862 TACR3P29371 465 aa6.03□□□□□ -1.44
NUP88-213ENST00000576862 SERPINF1P36955 418 aa6.03□□□□□ -1.44
NUP88-213ENST00000576862 VPS41P49754 854 aa6.03□□□□□ -1.44
NUP88-213ENST00000576862 ICA1Q05084 483 aa6.03□□□□□ -1.44
NUP88-213ENST00000576862 CHAF1AQ13111 956 aaPredicted RBP6.03□□□□□ -1.44
NUP88-213ENST00000576862 TRIM60Q495X7 471 aa6.03□□□□□ -1.44
NUP88-213ENST00000576862 MORN5Q5VZ52 161 aa6.03□□□□□ -1.44
NUP88-213ENST00000576862 LIN54Q6MZP7 749 aa6.03□□□□□ -1.44
NUP88-213ENST00000576862 RFX6Q8HWS3 928 aa6.03□□□□□ -1.44
NUP88-213ENST00000576862 CNGA4Q8IV77 575 aa6.03□□□□□ -1.44
NUP88-213ENST00000576862 C16orf71Q8IYS4 520 aaPredicted RBP6.03□□□□□ -1.44
NUP88-213ENST00000576862 ATG16L2Q8NAA4 619 aa6.03□□□□□ -1.44
NUP88-213ENST00000576862 WDR60Q8WVS4 1066 aa6.03□□□□□ -1.44
NUP88-213ENST00000576862 TRMT61AQ96FX7 289 aaKnown RBP6.03□□□□□ -1.44
NUP88-213ENST00000576862 ZNF845Q96IR2 970 aaPredicted RBP6.03□□□□□ -1.44
NUP88-213ENST00000576862 FCRL5Q96RD9 977 aa6.03□□□□□ -1.44
NUP88-213ENST00000576862 NRIP3Q9NQ35 241 aa6.03□□□□□ -1.44
NUP88-213ENST00000576862 ARL8BQ9NVJ2 186 aa6.03□□□□□ -1.44
NUP88-213ENST00000576862 ZNF70Q9UC06 446 aaPredicted RBP6.03□□□□□ -1.44
NUP88-213ENST00000576862 FAM90A18PA6NE21 464 aa6.02□□□□□ -1.45
NUP88-213ENST00000576862 FAM90A16PA6NEW6 464 aa6.02□□□□□ -1.45
NUP88-213ENST00000576862 FAM90A9PA6NNJ1 464 aa6.02□□□□□ -1.45
NUP88-213ENST00000576862 FAM90A5PA8MXJ8 464 aa6.02□□□□□ -1.45
NUP88-213ENST00000576862 TTC34A8MYJ7 566 aa6.02□□□□□ -1.45
NUP88-213ENST00000576862 TRIM38O00635 465 aa6.02□□□□□ -1.45
NUP88-213ENST00000576862 NKX2-8O15522 239 aa6.02□□□□□ -1.45
NUP88-213ENST00000576862 FAM90A15PP0C7V4 464 aa6.02□□□□□ -1.45
NUP88-213ENST00000576862 FAM90A14PP0C7W9 464 aa6.02□□□□□ -1.45
NUP88-213ENST00000576862 GYS1P13807 737 aa6.02□□□□□ -1.45
NUP88-213ENST00000576862 AKT1P31749 480 aa6.02□□□□□ -1.45
NUP88-213ENST00000576862 PNLIPRP1P54315 467 aa6.02□□□□□ -1.45
NUP88-213ENST00000576862 FAM3BP58499 235 aaPredicted RBP6.02□□□□□ -1.45
NUP88-213ENST00000576862 KLF9Q13886 244 aaPredicted RBP6.02□□□□□ -1.45
NUP88-213ENST00000576862 TUBB8Q3ZCM7 444 aa6.02□□□□□ -1.45
NUP88-213ENST00000576862 PAPD7Q5XG87 772 aaKnown RBP6.02□□□□□ -1.45
NUP88-213ENST00000576862 C1QL2Q7Z5L3 287 aa6.02□□□□□ -1.45
NUP88-213ENST00000576862 MYLK4Q86YV6 388 aaPredicted RBP6.02□□□□□ -1.45
NUP88-213ENST00000576862 RSC1A1Q92681 617 aa6.02□□□□□ -1.45
NUP88-213ENST00000576862 CELF1Q92879 486 aaKnown RBP6.02□□□□□ -1.45
NUP88-213ENST00000576862 ZNF778Q96MU6 729 aa6.02□□□□□ -1.45
NUP88-213ENST00000576862 RPS6KC1Q96S38 1066 aa6.02□□□□□ -1.45
NUP88-213ENST00000576862 MECRQ9BV79 373 aa6.02□□□□□ -1.45
NUP88-213ENST00000576862 B3GNT3Q9Y2A9 372 aa6.02□□□□□ -1.45
NUP88-213ENST00000576862 ABCC9O60706 1549 aa6.01□□□□□ -1.45
NUP88-213ENST00000576862 KIF28PB7ZC32 967 aa6.01□□□□□ -1.45
NUP88-213ENST00000576862 ACKR2O00590 384 aa6.01□□□□□ -1.45
NUP88-213ENST00000576862 PLAUP00749 431 aa6.01□□□□□ -1.45
NUP88-213ENST00000576862 CSTBP04080 98 aaKnown RBP6.01□□□□□ -1.45
NUP88-213ENST00000576862 PEPDP12955 493 aa6.01□□□□□ -1.45
NUP88-213ENST00000576862 HOXD9P28356 352 aaPredicted RBP6.01□□□□□ -1.45
NUP88-213ENST00000576862 HOXA7P31268 230 aaPredicted RBP6.01□□□□□ -1.45
NUP88-213ENST00000576862 SLC8A1P32418 973 aa6.01□□□□□ -1.45
NUP88-213ENST00000576862 SOX2P48431 317 aa6.01□□□□□ -1.45
NUP88-213ENST00000576862 DMWDQ09019 674 aa6.01□□□□□ -1.45
NUP88-213ENST00000576862 CBFBQ13951 182 aa6.01□□□□□ -1.45
NUP88-213ENST00000576862 FAM110CQ1W6H9 321 aa6.01□□□□□ -1.45
NUP88-213ENST00000576862 BTBD16Q32M84 506 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms