RNA–Protein interactions for RNA: ENST00000573126.1

RPAIN-212, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 2,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-212ENST00000573126 ADCY6O43306 1168 aa11.58□□□□□ -0.56
RPAIN-212ENST00000573126 MMP3P08254 477 aa11.58□□□□□ -0.56
RPAIN-212ENST00000573126 ZFXP17010 805 aaPredicted RBP11.58□□□□□ -0.56
RPAIN-212ENST00000573126 TKTP29401 623 aaKnown RBP11.58□□□□□ -0.56
RPAIN-212ENST00000573126 ARL4AP40617 200 aa11.58□□□□□ -0.56
RPAIN-212ENST00000573126 NR2C2P49116 596 aa11.58□□□□□ -0.56
RPAIN-212ENST00000573126 KDSRQ06136 332 aa11.58□□□□□ -0.56
RPAIN-212ENST00000573126 DCAF6Q58WW2 860 aa11.58□□□□□ -0.56
RPAIN-212ENST00000573126 ARHGAP17Q68EM7 881 aa11.58□□□□□ -0.56
RPAIN-212ENST00000573126 MTBPQ96DY7 904 aa11.58□□□□□ -0.56
RPAIN-212ENST00000573126 DCLRE1BQ9H816 532 aa11.58□□□□□ -0.56
RPAIN-212ENST00000573126 ARHGEF4Q9NR80 690 aa11.58□□□□□ -0.56
RPAIN-212ENST00000573126 KCNK4Q9NYG8 393 aa11.58□□□□□ -0.56
RPAIN-212ENST00000573126 MOCS1Q9NZB8 636 aa11.58□□□□□ -0.56
RPAIN-212ENST00000573126 PSAT1Q9Y617 370 aa11.58□□□□□ -0.56
RPAIN-212ENST00000573126 KPNA7A9QM74 516 aa11.57□□□□□ -0.56
RPAIN-212ENST00000573126 CREB3O43889 395 aa11.57□□□□□ -0.56
RPAIN-212ENST00000573126 KRT36O76013 467 aa11.57□□□□□ -0.56
RPAIN-212ENST00000573126 IL1BP01584 269 aa11.57□□□□□ -0.56
RPAIN-212ENST00000573126 RARBP10826 455 aa11.57□□□□□ -0.56
RPAIN-212ENST00000573126 ABL2P42684 1182 aa11.57□□□□□ -0.56
RPAIN-212ENST00000573126 ADIGQ0VDE8 80 aa11.57□□□□□ -0.56
RPAIN-212ENST00000573126 CBLBQ13191 982 aa11.57□□□□□ -0.56
RPAIN-212ENST00000573126 SNAPC2Q13487 334 aa11.57□□□□□ -0.56
RPAIN-212ENST00000573126 OLIG2Q13516 323 aa11.57□□□□□ -0.56
RPAIN-212ENST00000573126 RCN1Q15293 331 aa11.57□□□□□ -0.56
RPAIN-212ENST00000573126 NOTUMQ6P988 496 aa11.57□□□□□ -0.56
RPAIN-212ENST00000573126 TP53INP2Q8IXH6 220 aa11.57□□□□□ -0.56
RPAIN-212ENST00000573126 DEFB106AQ8N104 65 aa11.57□□□□□ -0.56
RPAIN-212ENST00000573126 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.57□□□□□ -0.56
RPAIN-212ENST00000573126 COLGALT1Q8NBJ5 622 aa11.57□□□□□ -0.56
RPAIN-212ENST00000573126 CCNYQ8ND76 341 aa11.57□□□□□ -0.56
RPAIN-212ENST00000573126 OR6J1Q8NGC5 347 aa11.57□□□□□ -0.56
RPAIN-212ENST00000573126 DTX3LQ8TDB6 740 aa11.57□□□□□ -0.56
RPAIN-212ENST00000573126 EMID1Q96A84 441 aaPredicted RBP11.57□□□□□ -0.56
RPAIN-212ENST00000573126 EBF4Q9BQW3 602 aa11.57□□□□□ -0.56
RPAIN-212ENST00000573126 GCOM2Q9BZD3 368 aaPredicted RBP11.57□□□□□ -0.56
RPAIN-212ENST00000573126 RNF39Q9H2S5 420 aa11.57□□□□□ -0.56
RPAIN-212ENST00000573126 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.57□□□□□ -0.56
RPAIN-212ENST00000573126 USP3Q9Y6I4 520 aa11.57□□□□□ -0.56
RPAIN-212ENST00000573126 A0A0A0MRY4 1105 aa11.57□□□□□ -0.56
RPAIN-212ENST00000573126 E2F8A0AVK6 867 aa11.57□□□□□ -0.56
RPAIN-212ENST00000573126 ZNF487B1APH4 448 aa11.57□□□□□ -0.56
RPAIN-212ENST00000573126 RNF103O00237 685 aa11.57□□□□□ -0.56
RPAIN-212ENST00000573126 CLDN5O00501 218 aa11.57□□□□□ -0.56
RPAIN-212ENST00000573126 ALDOAP04075 364 aaKnown RBP11.57□□□□□ -0.56
RPAIN-212ENST00000573126 BPGMP07738 259 aa11.57□□□□□ -0.56
RPAIN-212ENST00000573126 MGAT1P26572 445 aa11.57□□□□□ -0.56
RPAIN-212ENST00000573126 CRHR1P34998 444 aa11.57□□□□□ -0.56
RPAIN-212ENST00000573126 GMPRP36959 345 aa11.57□□□□□ -0.56
RPAIN-212ENST00000573126 SULT1E1P49888 294 aa11.57□□□□□ -0.56
RPAIN-212ENST00000573126 ALDH18A1P54886 795 aaKnown RBP11.57□□□□□ -0.56
RPAIN-212ENST00000573126 KRT72Q14CN4 511 aa11.57□□□□□ -0.56
RPAIN-212ENST00000573126 CCDC6Q16204 474 aa11.57□□□□□ -0.56
RPAIN-212ENST00000573126 CES3Q6UWW8 571 aa11.57□□□□□ -0.56
RPAIN-212ENST00000573126 DPP9Q86TI2 863 aa11.57□□□□□ -0.56
RPAIN-212ENST00000573126 PIGZQ86VD9 579 aa11.57□□□□□ -0.56
RPAIN-212ENST00000573126 CRLF3Q8IUI8 442 aa11.57□□□□□ -0.56
RPAIN-212ENST00000573126 TEX9Q8N6V9 391 aa11.57□□□□□ -0.56
RPAIN-212ENST00000573126 PPP1R14CQ8TAE6 165 aa11.57□□□□□ -0.56
RPAIN-212ENST00000573126 MICAL1Q8TDZ2 1067 aa11.57□□□□□ -0.56
RPAIN-212ENST00000573126 TMEM40Q8WWA1 233 aa11.57□□□□□ -0.56
RPAIN-212ENST00000573126 UPF1Q92900 1129 aaKnown RBP eCLIP11.57□□□□□ -0.56
RPAIN-212ENST00000573126 SPATA13Q96N96 652 aa11.57□□□□□ -0.56
RPAIN-212ENST00000573126 RILPQ96NA2 401 aa11.57□□□□□ -0.56
RPAIN-212ENST00000573126 OLFM3Q96PB7 478 aa11.57□□□□□ -0.56
RPAIN-212ENST00000573126 TUBB6Q9BUF5 446 aa11.57□□□□□ -0.56
RPAIN-212ENST00000573126 SNX25Q9H3E2 840 aa11.57□□□□□ -0.56
RPAIN-212ENST00000573126 PIN4Q9Y237 131 aaKnown RBP11.57□□□□□ -0.56
RPAIN-212ENST00000573126 DERAQ9Y315 318 aa11.57□□□□□ -0.56
RPAIN-212ENST00000573126 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.57□□□□□ -0.56
RPAIN-212ENST00000573126 SMIM28A0A1B0GU29 152 aa11.56□□□□□ -0.56
RPAIN-212ENST00000573126 B2RBV5 119 aa11.56□□□□□ -0.56
RPAIN-212ENST00000573126 GPR32O75388 356 aa11.56□□□□□ -0.56
RPAIN-212ENST00000573126 LYPLA1O75608 230 aaPredicted RBP11.56□□□□□ -0.56
RPAIN-212ENST00000573126 GSTA2P09210 222 aa11.56□□□□□ -0.56
RPAIN-212ENST00000573126 KCNA4P22459 653 aa11.56□□□□□ -0.56
RPAIN-212ENST00000573126 ACAT1P24752 427 aaKnown RBP11.56□□□□□ -0.56
RPAIN-212ENST00000573126 MATKP42679 507 aa11.56□□□□□ -0.56
RPAIN-212ENST00000573126 RPL10AP62906 217 aaKnown RBP11.56□□□□□ -0.56
RPAIN-212ENST00000573126 CCNA1P78396 465 aa11.56□□□□□ -0.56
RPAIN-212ENST00000573126 SOX4Q06945 474 aaPredicted RBP11.56□□□□□ -0.56
RPAIN-212ENST00000573126 DGKDQ16760 1214 aa11.56□□□□□ -0.56
RPAIN-212ENST00000573126 C4orf22Q6V702 233 aa11.56□□□□□ -0.56
RPAIN-212ENST00000573126 TRIM42Q8IWZ5 723 aa11.56□□□□□ -0.56
RPAIN-212ENST00000573126 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.56□□□□□ -0.56
RPAIN-212ENST00000573126 NME8Q8N427 588 aa11.56□□□□□ -0.56
RPAIN-212ENST00000573126 SMC1BQ8NDV3 1235 aa11.56□□□□□ -0.56
RPAIN-212ENST00000573126 P2RY11Q96G91 374 aa11.56□□□□□ -0.56
RPAIN-212ENST00000573126 MKS1Q9NXB0 559 aa11.56□□□□□ -0.56
RPAIN-212ENST00000573126 UBQLN1Q9UMX0 589 aaKnown RBP11.56□□□□□ -0.56
RPAIN-212ENST00000573126 HBS1LQ9Y450 684 aaKnown RBP11.56□□□□□ -0.56
RPAIN-212ENST00000573126 LRRC42Q9Y546 428 aa11.56□□□□□ -0.56
RPAIN-212ENST00000573126 E7ENQ6 273 aa11.56□□□□□ -0.56
RPAIN-212ENST00000573126 PDHXO00330 501 aa11.56□□□□□ -0.56
RPAIN-212ENST00000573126 TPP1O14773 563 aa11.56□□□□□ -0.56
RPAIN-212ENST00000573126 DGKIO75912 1065 aa11.56□□□□□ -0.56
RPAIN-212ENST00000573126 BEST1O76090 585 aa11.56□□□□□ -0.56
RPAIN-212ENST00000573126 UPP2O95045 317 aa11.56□□□□□ -0.56
RPAIN-212ENST00000573126 F7P08709 466 aaPredicted RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms