RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 C6orf89Q6UWU4 347 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 LEKR1Q6ZMV7 388 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 RUFY4Q6ZNE9 571 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 ZNF600Q6ZNG1 722 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 PPP1R3FQ6ZSY5 799 aaPredicted RBP3.7□□□□□ -1.82
SMG6-208ENST00000570874 TAOK1Q7L7X3 1001 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 NLRC3Q7RTR2 1065 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 R3HCC1LQ7Z5L2 792 aaKnown RBP3.7□□□□□ -1.82
SMG6-208ENST00000570874 FGD2Q7Z6J4 655 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 VSIG10LQ86VR7 867 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 COMTD1Q86VU5 262 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 TSPYL5Q86VY4 417 aaPredicted RBP3.7□□□□□ -1.82
SMG6-208ENST00000570874 RFX6Q8HWS3 928 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 CPOQ8IVL8 374 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 CDH26Q8IXH8 852 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 KIAA2013Q8IYS2 634 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 MIER2Q8N344 545 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 RNF10Q8N5U6 811 aaKnown RBP3.7□□□□□ -1.82
SMG6-208ENST00000570874 NIPA2Q8N8Q9 360 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 IGSF22Q8N9C0 903 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 ARRDC4Q8NCT1 418 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 GLIS3Q8NEA6 775 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 REPS2Q8NFH8 660 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 LILRB4Q8NHJ6 448 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.7□□□□□ -1.82
SMG6-208ENST00000570874 PPP1R35Q8TAP8 253 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 SPATA20Q8TB22 786 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 SLC7A14Q8TBB6 771 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 SLC26A7Q8TE54 656 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 CLEC4DQ8WXI8 215 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 GATAD2BQ8WXI9 593 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 BRI3BPQ8WY22 251 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 SGK3Q96BR1 496 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 CALML4Q96GE6 196 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 MBOAT7Q96N66 472 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 LENG8Q96PV6 779 aaPredicted RBP3.7□□□□□ -1.82
SMG6-208ENST00000570874 PSKH2Q96QS6 385 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 TM9SF2Q99805 663 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 ORAI3Q9BRQ5 295 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 FGFBP2Q9BYJ0 223 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 TSGA10Q9BZW7 698 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 UNKQ9C0B0 810 aaKnown RBP3.7□□□□□ -1.82
SMG6-208ENST00000570874 REXO4Q9GZR2 422 aaKnown RBP3.7□□□□□ -1.82
SMG6-208ENST00000570874 UNC93B1Q9H1C4 597 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 MMADHCQ9H3L0 296 aaPredicted RBP3.7□□□□□ -1.82
SMG6-208ENST00000570874 STN1Q9H668 368 aaKnown RBP3.7□□□□□ -1.82
SMG6-208ENST00000570874 HAUS4Q9H6D7 363 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 CNTD2Q9H8S5 307 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 ELP3Q9H9T3 547 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 POLD4Q9HCU8 107 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 VTA1Q9NP79 307 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 EIF2B3Q9NR50 452 aaKnown RBP3.7□□□□□ -1.82
SMG6-208ENST00000570874 POLE3Q9NRF9 147 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 SAMSN1Q9NSI8 373 aaKnown RBP3.7□□□□□ -1.82
SMG6-208ENST00000570874 INTS13Q9NVM9 706 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 C14orf119Q9NWQ9 140 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 GDAP2Q9NXN4 497 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 OGFRQ9NZT2 677 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 IFNKQ9P0W0 207 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 KIF17Q9P2E2 1029 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 MORF4L1Q9UBU8 362 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 AMACRQ9UHK6 382 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 FEM1BQ9UK73 627 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 CROTQ9UKG9 612 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 PSME2Q9UL46 239 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 PYCARDQ9ULZ3 195 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 CORO2BQ9UQ03 480 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 CLCA2Q9UQC9 943 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 CAMK2AQ9UQM7 478 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 PIN4Q9Y237 131 aaKnown RBP3.7□□□□□ -1.82
SMG6-208ENST00000570874 C15orf41Q9Y2V0 281 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 TELO2Q9Y4R8 837 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 SNX13Q9Y5W8 968 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 GMEB1Q9Y692 573 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 ATP23Q9Y6H3 246 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 ZHX2Q9Y6X8 837 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 ATP8B3O60423 1300 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 RALGAPA2Q2PPJ7 1873 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 IGLV3-22A0A075B6J6 115 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 TRAV6A0A075B6T7 132 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 IQANK1A0A1B0GTG1 560 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 GOLGA6L7A0A1B0GV03 622 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 A0A1W2PQU0 124 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 MAGEB16A2A368 324 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 MYMKA6NI61 221 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 SPDYE3A6NKU9 549 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 BECN2A8MW95 431 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 TTC34A8MYJ7 566 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 H0YAE9 185 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 SYT5O00445 386 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 MEIS1O00470 390 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 ACKR2O00590 384 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 NVLO15381 856 aaKnown RBP3.69□□□□□ -1.82
SMG6-208ENST00000570874 MSH4O15457 936 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 PROM1O43490 865 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 ATP8B1O43520 1251 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 SLC25A17O43808 307 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 B3GALT2O43825 422 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 CIDEAO60543 219 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 EXOC3O60645 756 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms