RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.48■□□□□ 0.23
HERPUD1-215ENST00000568676 TNFSF14O43557 240 aa16.48■□□□□ 0.23
HERPUD1-215ENST00000568676 DFNA5O60443 496 aa16.48■□□□□ 0.23
HERPUD1-215ENST00000568676 LATS1O95835 1130 aa16.48■□□□□ 0.23
HERPUD1-215ENST00000568676 KRT13P13646 458 aa16.48■□□□□ 0.23
HERPUD1-215ENST00000568676 CD58P19256 250 aa16.48■□□□□ 0.23
HERPUD1-215ENST00000568676 PRKCHP24723 683 aa16.48■□□□□ 0.23
HERPUD1-215ENST00000568676 GTF2H1P32780 548 aa16.48■□□□□ 0.23
HERPUD1-215ENST00000568676 GRK6P43250 576 aa16.48■□□□□ 0.23
HERPUD1-215ENST00000568676 HARS2P49590 506 aaKnown RBP16.48■□□□□ 0.23
HERPUD1-215ENST00000568676 BNC1Q01954 994 aa16.48■□□□□ 0.23
HERPUD1-215ENST00000568676 INAVAQ3KP66 663 aa16.48■□□□□ 0.23
HERPUD1-215ENST00000568676 RAB41Q5JT25 222 aa16.48■□□□□ 0.23
HERPUD1-215ENST00000568676 C19orf48Q6RUI8 117 aa16.48■□□□□ 0.23
HERPUD1-215ENST00000568676 ZNF557Q8N988 423 aaPredicted RBP16.48■□□□□ 0.23
HERPUD1-215ENST00000568676 MDM1Q8TC05 714 aa16.48■□□□□ 0.23
HERPUD1-215ENST00000568676 CCDC47Q96A33 483 aaKnown RBP16.48■□□□□ 0.23
HERPUD1-215ENST00000568676 P2RY11Q96G91 374 aa16.48■□□□□ 0.23
HERPUD1-215ENST00000568676 PAGE5Q96GU1 130 aa16.48■□□□□ 0.23
HERPUD1-215ENST00000568676 HEXIM2Q96MH2 286 aaKnown RBP16.48■□□□□ 0.23
HERPUD1-215ENST00000568676 IRX2Q9BZI1 471 aaPredicted RBP16.48■□□□□ 0.23
HERPUD1-215ENST00000568676 APOBEC3GQ9HC16 384 aaKnown RBP16.48■□□□□ 0.23
HERPUD1-215ENST00000568676 TOR4AQ9NXH8 423 aa16.48■□□□□ 0.23
HERPUD1-215ENST00000568676 CKAP5Q14008 2032 aa16.48■□□□□ 0.23
HERPUD1-215ENST00000568676 FASNP49327 2511 aaKnown RBP16.48■□□□□ 0.23
HERPUD1-215ENST00000568676 ACTN4O43707 911 aaKnown RBP16.47■□□□□ 0.23
HERPUD1-215ENST00000568676 PCDHGA12O60330 932 aa16.47■□□□□ 0.23
HERPUD1-215ENST00000568676 HMBSP08397 361 aa16.47■□□□□ 0.23
HERPUD1-215ENST00000568676 NR2F2P24468 414 aa16.47■□□□□ 0.23
HERPUD1-215ENST00000568676 RPL13P26373 211 aaKnown RBP16.47■□□□□ 0.23
HERPUD1-215ENST00000568676 GCLMP48507 274 aa16.47■□□□□ 0.23
HERPUD1-215ENST00000568676 YWHAGP61981 247 aaKnown RBP eCLIP16.47■□□□□ 0.23
HERPUD1-215ENST00000568676 TRIP4Q15650 581 aaPredicted RBP16.47■□□□□ 0.23
HERPUD1-215ENST00000568676 SOWAHCQ53LP3 525 aaPredicted RBP16.47■□□□□ 0.23
HERPUD1-215ENST00000568676 PM20D1Q6GTS8 502 aa16.47■□□□□ 0.23
HERPUD1-215ENST00000568676 TAS1R2Q8TE23 839 aa16.47■□□□□ 0.23
HERPUD1-215ENST00000568676 GOLGA1Q92805 767 aa16.47■□□□□ 0.23
HERPUD1-215ENST00000568676 IGSF8Q969P0 613 aa16.47■□□□□ 0.23
HERPUD1-215ENST00000568676 BTBD1Q9H0C5 482 aa16.47■□□□□ 0.23
HERPUD1-215ENST00000568676 TMEM245Q9H330 911 aa16.47■□□□□ 0.23
HERPUD1-215ENST00000568676 TMEM8AQ9HCN3 771 aa16.47■□□□□ 0.23
HERPUD1-215ENST00000568676 FOXD4L1Q9NU39 408 aa16.47■□□□□ 0.23
HERPUD1-215ENST00000568676 SERTAD1Q9UHV2 236 aa16.47■□□□□ 0.23
HERPUD1-215ENST00000568676 STOML2Q9UJZ1 356 aa16.47■□□□□ 0.23
HERPUD1-215ENST00000568676 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.47■□□□□ 0.23
HERPUD1-215ENST00000568676 HBS1LQ9Y450 684 aaKnown RBP16.47■□□□□ 0.23
HERPUD1-215ENST00000568676 A0A1B0GVT2 93 aa16.46■□□□□ 0.23
HERPUD1-215ENST00000568676 SLC12A8A0AV02 714 aa16.46■□□□□ 0.23
HERPUD1-215ENST00000568676 PAPSS1O43252 624 aaPredicted RBP16.46■□□□□ 0.23
HERPUD1-215ENST00000568676 ATXN1LP0C7T5 689 aaKnown RBP16.46■□□□□ 0.23
HERPUD1-215ENST00000568676 PSMC2P35998 433 aaKnown RBP16.46■□□□□ 0.23
HERPUD1-215ENST00000568676 CSNK1EP49674 416 aaKnown RBP16.46■□□□□ 0.23
HERPUD1-215ENST00000568676 CCT8P50990 548 aa16.46■□□□□ 0.23
HERPUD1-215ENST00000568676 MCCD1P59942 119 aaPredicted RBP16.46■□□□□ 0.23
HERPUD1-215ENST00000568676 SFSWAPQ12872 951 aaKnown RBP16.46■□□□□ 0.23
HERPUD1-215ENST00000568676 TTC31Q49AM3 519 aaPredicted RBP16.46■□□□□ 0.23
HERPUD1-215ENST00000568676 TMEM215Q68D42 235 aa16.46■□□□□ 0.23
HERPUD1-215ENST00000568676 ARHGAP17Q68EM7 881 aa16.46■□□□□ 0.23
HERPUD1-215ENST00000568676 KRT39Q6A163 491 aa16.46■□□□□ 0.23
HERPUD1-215ENST00000568676 PIGZQ86VD9 579 aa16.46■□□□□ 0.23
HERPUD1-215ENST00000568676 GRAMD1CQ8IYS0 662 aa16.46■□□□□ 0.23
HERPUD1-215ENST00000568676 AHI1Q8N157 1196 aa16.46■□□□□ 0.23
HERPUD1-215ENST00000568676 ANKRD52Q8NB46 1076 aa16.46■□□□□ 0.23
HERPUD1-215ENST00000568676 SNX19Q92543 992 aa16.46■□□□□ 0.23
HERPUD1-215ENST00000568676 TMEM176AQ96HP8 235 aa16.46■□□□□ 0.23
HERPUD1-215ENST00000568676 SGK2Q9HBY8 427 aa16.46■□□□□ 0.23
HERPUD1-215ENST00000568676 SCML1Q9UN30 329 aa16.46■□□□□ 0.23
HERPUD1-215ENST00000568676 ANKRD6Q9Y2G4 727 aa16.46■□□□□ 0.23
HERPUD1-215ENST00000568676 RAXQ9Y2V3 346 aa16.46■□□□□ 0.23
HERPUD1-215ENST00000568676 PLXNB3Q9ULL4 1909 aa16.46■□□□□ 0.23
HERPUD1-215ENST00000568676 LAMA5O15230 3695 aa16.46■□□□□ 0.22
HERPUD1-215ENST00000568676 STX10O60499 249 aa16.45■□□□□ 0.22
HERPUD1-215ENST00000568676 SEMA4FO95754 770 aa16.45■□□□□ 0.22
HERPUD1-215ENST00000568676 ZBED1O96006 694 aa16.45■□□□□ 0.22
HERPUD1-215ENST00000568676 DNTTP04053 509 aa16.45■□□□□ 0.22
HERPUD1-215ENST00000568676 ATP5BP06576 529 aaKnown RBP16.45■□□□□ 0.22
HERPUD1-215ENST00000568676 ZSCAN22P10073 491 aaPredicted RBP16.45■□□□□ 0.22
HERPUD1-215ENST00000568676 CDK4P11802 303 aa16.45■□□□□ 0.22
HERPUD1-215ENST00000568676 CD27P26842 260 aa16.45■□□□□ 0.22
HERPUD1-215ENST00000568676 HOXD9P28356 352 aaPredicted RBP16.45■□□□□ 0.22
HERPUD1-215ENST00000568676 BCAT1P54687 386 aa16.45■□□□□ 0.22
HERPUD1-215ENST00000568676 PPP3CAQ08209 521 aa16.45■□□□□ 0.22
HERPUD1-215ENST00000568676 SMAD1Q15797 465 aaKnown RBP16.45■□□□□ 0.22
HERPUD1-215ENST00000568676 KIF19Q2TAC6 998 aa16.45■□□□□ 0.22
HERPUD1-215ENST00000568676 FNDC3BQ53EP0 1204 aaKnown RBP16.45■□□□□ 0.22
HERPUD1-215ENST00000568676 ZNF394Q53GI3 561 aa16.45■□□□□ 0.22
HERPUD1-215ENST00000568676 FAM124AQ86V42 546 aa16.45■□□□□ 0.22
HERPUD1-215ENST00000568676 SCUBE3Q8IX30 993 aa16.45■□□□□ 0.22
HERPUD1-215ENST00000568676 FAM186BQ8IYM0 893 aa16.45■□□□□ 0.22
HERPUD1-215ENST00000568676 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.45■□□□□ 0.22
HERPUD1-215ENST00000568676 PDCD7Q8N8D1 485 aaKnown RBP16.45■□□□□ 0.22
HERPUD1-215ENST00000568676 SKA1Q96BD8 255 aa16.45■□□□□ 0.22
HERPUD1-215ENST00000568676 C6orf106Q9H6K1 298 aaPredicted RBP16.45■□□□□ 0.22
HERPUD1-215ENST00000568676 TM9SF3Q9HD45 589 aa16.45■□□□□ 0.22
HERPUD1-215ENST00000568676 SUN2Q9UH99 717 aa16.45■□□□□ 0.22
HERPUD1-215ENST00000568676 CLEC4EQ9ULY5 219 aa16.45■□□□□ 0.22
HERPUD1-215ENST00000568676 ITPR1Q14643 2758 aa16.45■□□□□ 0.22
HERPUD1-215ENST00000568676 PTPRBP23467 1997 aa16.44■□□□□ 0.22
HERPUD1-215ENST00000568676 A0A087WV48 116 aa16.44■□□□□ 0.22
HERPUD1-215ENST00000568676 EIF4E1BA6NMX2 242 aaKnown RBP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms