RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 LRP12Q9Y561 859 aa5□□□□□ -1.61
CHD9-212ENST00000564641 SNX13Q9Y5W8 968 aa5□□□□□ -1.61
CHD9-212ENST00000564641 TDRD9Q8NDG6 1382 aaKnown RBP5□□□□□ -1.61
CHD9-212ENST00000564641 SNAPC4Q5SXM2 1469 aa5□□□□□ -1.61
CHD9-212ENST00000564641 FGD5Q6ZNL6 1462 aa5□□□□□ -1.61
CHD9-212ENST00000564641 WRNQ14191 1432 aaPredicted RBP eCLIP4.99□□□□□ -1.61
CHD9-212ENST00000564641 SLC22A23A1A5C7 686 aa4.99□□□□□ -1.61
CHD9-212ENST00000564641 CTIFO43310 598 aaKnown RBP4.99□□□□□ -1.61
CHD9-212ENST00000564641 ZC3H11AO75152 810 aaKnown RBP eCLIP4.99□□□□□ -1.61
CHD9-212ENST00000564641 SGPL1O95470 568 aa4.99□□□□□ -1.61
CHD9-212ENST00000564641 CDC25AP30304 524 aa4.99□□□□□ -1.61
CHD9-212ENST00000564641 SLC5A2P31639 672 aa4.99□□□□□ -1.61
CHD9-212ENST00000564641 ATICP31939 592 aa4.99□□□□□ -1.61
CHD9-212ENST00000564641 KCNJ4P48050 445 aa4.99□□□□□ -1.61
CHD9-212ENST00000564641 GPS1Q13098 491 aa4.99□□□□□ -1.61
CHD9-212ENST00000564641 DAG1Q14118 895 aa4.99□□□□□ -1.61
CHD9-212ENST00000564641 TFAP2DQ7Z6R9 452 aa4.99□□□□□ -1.61
CHD9-212ENST00000564641 AKAP1Q92667 903 aaKnown RBP eCLIP4.99□□□□□ -1.61
CHD9-212ENST00000564641 SLC25A28Q96A46 364 aa4.99□□□□□ -1.61
CHD9-212ENST00000564641 TTC17Q96AE7 1141 aa4.99□□□□□ -1.61
CHD9-212ENST00000564641 SCNM1Q9BWG6 230 aa4.99□□□□□ -1.61
CHD9-212ENST00000564641 HIPK2Q9H2X6 1198 aa4.99□□□□□ -1.61
CHD9-212ENST00000564641 AGO2Q9UKV8 859 aaKnown RBP4.99□□□□□ -1.61
CHD9-212ENST00000564641 GAPVD1Q14C86 1478 aa4.99□□□□□ -1.61
CHD9-212ENST00000564641 ARAP1Q96P48 1450 aa4.99□□□□□ -1.61
CHD9-212ENST00000564641 CBFA2T3O75081 653 aa4.98□□□□□ -1.61
CHD9-212ENST00000564641 IDEP14735 1019 aa4.98□□□□□ -1.61
CHD9-212ENST00000564641 IGHMBP2P38935 993 aaKnown RBP4.98□□□□□ -1.61
CHD9-212ENST00000564641 PBX1P40424 430 aa4.98□□□□□ -1.61
CHD9-212ENST00000564641 CDKN2AP42771 156 aaKnown RBP4.98□□□□□ -1.61
CHD9-212ENST00000564641 FAXCQ5TGI0 409 aa4.98□□□□□ -1.61
CHD9-212ENST00000564641 ABLIM2Q6H8Q1 611 aa4.98□□□□□ -1.61
CHD9-212ENST00000564641 MRNIPQ6NTE8 343 aa4.98□□□□□ -1.61
CHD9-212ENST00000564641 PDXDC1Q6P996 788 aa4.98□□□□□ -1.61
CHD9-212ENST00000564641 ZNF549Q6P9A3 640 aa4.98□□□□□ -1.61
CHD9-212ENST00000564641 TRAPPC11Q7Z392 1133 aa4.98□□□□□ -1.61
CHD9-212ENST00000564641 ADHFE1Q8IWW8 467 aa4.98□□□□□ -1.61
CHD9-212ENST00000564641 CCDC150Q8NCX0 1101 aa4.98□□□□□ -1.61
CHD9-212ENST00000564641 ACRBPQ8NEB7 543 aa4.98□□□□□ -1.61
CHD9-212ENST00000564641 SPATA3Q8NHX4 192 aa4.98□□□□□ -1.61
CHD9-212ENST00000564641 PRR11Q96HE9 360 aaPredicted RBP4.98□□□□□ -1.61
CHD9-212ENST00000564641 TTLL2Q9BWV7 592 aa4.98□□□□□ -1.61
CHD9-212ENST00000564641 MAGEB5Q9BZ81 275 aa4.98□□□□□ -1.61
CHD9-212ENST00000564641 MLXIPQ9HAP2 919 aa4.98□□□□□ -1.61
CHD9-212ENST00000564641 ASNSD1Q9NWL6 643 aa4.98□□□□□ -1.61
CHD9-212ENST00000564641 IPO11Q9UI26 975 aaKnown RBP4.98□□□□□ -1.61
CHD9-212ENST00000564641 PBRM1Q86U86 1689 aa4.97□□□□□ -1.61
CHD9-212ENST00000564641 RAD54L2Q9Y4B4 1467 aa4.97□□□□□ -1.61
CHD9-212ENST00000564641 EME2A4GXA9 379 aaPredicted RBP4.97□□□□□ -1.61
CHD9-212ENST00000564641 C16orf96A6NNT2 1141 aa4.97□□□□□ -1.61
CHD9-212ENST00000564641 PRR23D1E9PI22 279 aaPredicted RBP4.97□□□□□ -1.61
CHD9-212ENST00000564641 F8W8V4 182 aa4.97□□□□□ -1.61
CHD9-212ENST00000564641 ENO1P06733 434 aaKnown RBP4.97□□□□□ -1.61
CHD9-212ENST00000564641 PRR23D2P0DMB1 279 aaPredicted RBP4.97□□□□□ -1.61
CHD9-212ENST00000564641 TNFRSF1BP20333 461 aa4.97□□□□□ -1.61
CHD9-212ENST00000564641 VPS41P49754 854 aa4.97□□□□□ -1.61
CHD9-212ENST00000564641 PGGT1BP53609 377 aa4.97□□□□□ -1.61
CHD9-212ENST00000564641 SEMA3BQ13214 749 aa4.97□□□□□ -1.61
CHD9-212ENST00000564641 FHL3Q13643 280 aa4.97□□□□□ -1.61
CHD9-212ENST00000564641 FAM90A2PQ658T7 463 aa4.97□□□□□ -1.61
CHD9-212ENST00000564641 RFX8Q6ZV50 586 aa4.97□□□□□ -1.61
CHD9-212ENST00000564641 B4GALNT4Q76KP1 1039 aa4.97□□□□□ -1.61
CHD9-212ENST00000564641 ADGRF4Q8IZF3 695 aa4.97□□□□□ -1.61
CHD9-212ENST00000564641 CLASRPQ8N2M8 674 aaKnown RBP4.97□□□□□ -1.61
CHD9-212ENST00000564641 ATP11CQ8NB49 1132 aa4.97□□□□□ -1.61
CHD9-212ENST00000564641 OR52L2PQ8NGH6 319 aa4.97□□□□□ -1.61
CHD9-212ENST00000564641 CELF1Q92879 486 aaKnown RBP4.97□□□□□ -1.61
CHD9-212ENST00000564641 ZNF845Q96IR2 970 aaPredicted RBP4.97□□□□□ -1.61
CHD9-212ENST00000564641 GATA5Q9BWX5 397 aaPredicted RBP4.97□□□□□ -1.61
CHD9-212ENST00000564641 TRIM2Q9C040 744 aa4.97□□□□□ -1.61
CHD9-212ENST00000564641 FZD3Q9NPG1 666 aa4.97□□□□□ -1.61
CHD9-212ENST00000564641 OBP2AQ9NY56 170 aa4.97□□□□□ -1.61
CHD9-212ENST00000564641 VPS4AQ9UN37 437 aa4.97□□□□□ -1.61
CHD9-212ENST00000564641 PCDHA12Q9UN75 941 aa4.97□□□□□ -1.61
CHD9-212ENST00000564641 CLASP1Q7Z460 1538 aa4.97□□□□□ -1.61
CHD9-212ENST00000564641 ABCA10Q8WWZ4 1543 aa4.97□□□□□ -1.61
CHD9-212ENST00000564641 TRBV5-3A0A0A0MS03 114 aa4.96□□□□□ -1.62
CHD9-212ENST00000564641 RHPN2P1A8MT19 583 aa4.96□□□□□ -1.62
CHD9-212ENST00000564641 ZNF814B7Z6K7 855 aa4.96□□□□□ -1.62
CHD9-212ENST00000564641 PRYO14603 147 aa4.96□□□□□ -1.62
CHD9-212ENST00000564641 SPTLC2O15270 562 aa4.96□□□□□ -1.62
CHD9-212ENST00000564641 KCNQ3O43525 872 aa4.96□□□□□ -1.62
CHD9-212ENST00000564641 EPN2O95208 641 aa4.96□□□□□ -1.62
CHD9-212ENST00000564641 FGF2P09038 288 aa4.96□□□□□ -1.62
CHD9-212ENST00000564641 MYL4P12829 197 aa4.96□□□□□ -1.62
CHD9-212ENST00000564641 ST6GAL1P15907 406 aa4.96□□□□□ -1.62
CHD9-212ENST00000564641 DRD1P21728 446 aa4.96□□□□□ -1.62
CHD9-212ENST00000564641 YY1P25490 414 aa4.96□□□□□ -1.62
CHD9-212ENST00000564641 IDUAP35475 653 aa4.96□□□□□ -1.62
CHD9-212ENST00000564641 DLGAP5Q15398 846 aa4.96□□□□□ -1.62
CHD9-212ENST00000564641 PRTGQ2VWP7 1150 aa4.96□□□□□ -1.62
CHD9-212ENST00000564641 BEND5Q7L4P6 421 aa4.96□□□□□ -1.62
CHD9-212ENST00000564641 PELI3Q8N2H9 469 aa4.96□□□□□ -1.62
CHD9-212ENST00000564641 GLMPQ8WWB7 406 aa4.96□□□□□ -1.62
CHD9-212ENST00000564641 GJA10Q969M2 543 aa4.96□□□□□ -1.62
CHD9-212ENST00000564641 NUDT22Q9BRQ3 303 aa4.96□□□□□ -1.62
CHD9-212ENST00000564641 TMEM204Q9BSN7 226 aa4.96□□□□□ -1.62
CHD9-212ENST00000564641 HTATIP2Q9BUP3 242 aa4.96□□□□□ -1.62
CHD9-212ENST00000564641 KRTAP2-2Q9BYT5 123 aa4.96□□□□□ -1.62
CHD9-212ENST00000564641 MOV10Q9HCE1 1003 aaKnown RBP4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms