RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 ETV5P41161 510 aa11.31□□□□□ -0.6
HDGFL3-204ENST00000563790 OSTNP61366 133 aa11.31□□□□□ -0.6
HDGFL3-204ENST00000563790 TRDNQ13061 729 aa11.31□□□□□ -0.6
HDGFL3-204ENST00000563790 ART3Q13508 389 aa11.31□□□□□ -0.6
HDGFL3-204ENST00000563790 E2F5Q15329 346 aa11.31□□□□□ -0.6
HDGFL3-204ENST00000563790 NADK2Q4G0N4 442 aa11.31□□□□□ -0.6
HDGFL3-204ENST00000563790 PERM1Q5SV97 790 aa11.31□□□□□ -0.6
HDGFL3-204ENST00000563790 PPP4R3AQ6IN85 833 aa11.31□□□□□ -0.6
HDGFL3-204ENST00000563790 ZCCHC8Q6NZY4 707 aaKnown RBP11.31□□□□□ -0.6
HDGFL3-204ENST00000563790 BIVMQ86UB2 503 aa11.31□□□□□ -0.6
HDGFL3-204ENST00000563790 CHDHQ8NE62 594 aaPredicted RBP11.31□□□□□ -0.6
HDGFL3-204ENST00000563790 BBS2Q9BXC9 721 aa11.31□□□□□ -0.6
HDGFL3-204ENST00000563790 CYP4F12Q9HCS2 524 aa11.31□□□□□ -0.6
HDGFL3-204ENST00000563790 C6orf50Q9HD87 102 aa11.31□□□□□ -0.6
HDGFL3-204ENST00000563790 ABCB6Q9NP58 842 aa11.31□□□□□ -0.6
HDGFL3-204ENST00000563790 TMLHEQ9NVH6 421 aa11.31□□□□□ -0.6
HDGFL3-204ENST00000563790 TRPM5Q9NZQ8 1165 aa11.31□□□□□ -0.6
HDGFL3-204ENST00000563790 MARK1Q9P0L2 795 aa11.31□□□□□ -0.6
HDGFL3-204ENST00000563790 LOXL2Q9Y4K0 774 aa11.31□□□□□ -0.6
HDGFL3-204ENST00000563790 KCNMB2Q9Y691 235 aa11.31□□□□□ -0.6
HDGFL3-204ENST00000563790 ADAMTS3O15072 1205 aa11.3□□□□□ -0.6
HDGFL3-204ENST00000563790 ZG16O60844 167 aa11.3□□□□□ -0.6
HDGFL3-204ENST00000563790 RPS14P62263 151 aaKnown RBP11.3□□□□□ -0.6
HDGFL3-204ENST00000563790 NT5DC1Q5TFE4 455 aa11.3□□□□□ -0.6
HDGFL3-204ENST00000563790 TMEM198Q66K66 360 aa11.3□□□□□ -0.6
HDGFL3-204ENST00000563790 NAPEPLDQ6IQ20 393 aa11.3□□□□□ -0.6
HDGFL3-204ENST00000563790 USP30Q70CQ3 517 aa11.3□□□□□ -0.6
HDGFL3-204ENST00000563790 Q71RC1 249 aaPredicted RBP11.3□□□□□ -0.6
HDGFL3-204ENST00000563790 DCP1BQ8IZD4 617 aaKnown RBP11.3□□□□□ -0.6
HDGFL3-204ENST00000563790 UCMAQ8WVF2 138 aa11.3□□□□□ -0.6
HDGFL3-204ENST00000563790 CDT1Q9H211 546 aa11.3□□□□□ -0.6
HDGFL3-204ENST00000563790 CXXC4Q9H2H0 198 aa11.3□□□□□ -0.6
HDGFL3-204ENST00000563790 FBRSQ9HAH7 460 aa11.3□□□□□ -0.6
HDGFL3-204ENST00000563790 WDR35Q9P2L0 1181 aa11.3□□□□□ -0.6
HDGFL3-204ENST00000563790 TPX2Q9ULW0 747 aaKnown RBP11.3□□□□□ -0.6
HDGFL3-204ENST00000563790 SLC27A6Q9Y2P4 619 aa11.3□□□□□ -0.6
HDGFL3-204ENST00000563790 DAAM1Q9Y4D1 1078 aa11.3□□□□□ -0.6
HDGFL3-204ENST00000563790 KCTD3Q9Y597 815 aa11.3□□□□□ -0.6
HDGFL3-204ENST00000563790 ZNF840PA6NDX5 716 aa11.29□□□□□ -0.6
HDGFL3-204ENST00000563790 ANKUB1A6NFN9 424 aa11.29□□□□□ -0.6
HDGFL3-204ENST00000563790 LRRC72A6NJI9 287 aa11.29□□□□□ -0.6
HDGFL3-204ENST00000563790 CYP2F1P24903 491 aa11.29□□□□□ -0.6
HDGFL3-204ENST00000563790 LILRA4P59901 499 aa11.29□□□□□ -0.6
HDGFL3-204ENST00000563790 NFE2Q16621 373 aaPredicted RBP11.29□□□□□ -0.6
HDGFL3-204ENST00000563790 Q4G0T1 1027 aa11.29□□□□□ -0.6
HDGFL3-204ENST00000563790 SERPINA13PQ6UXR4 307 aa11.29□□□□□ -0.6
HDGFL3-204ENST00000563790 PHC2Q8IXK0 858 aa11.29□□□□□ -0.6
HDGFL3-204ENST00000563790 REXO1Q8N1G1 1221 aaKnown RBP11.29□□□□□ -0.6
HDGFL3-204ENST00000563790 OR2T34Q8NGX1 318 aa11.29□□□□□ -0.6
HDGFL3-204ENST00000563790 NUDT8Q8WV74 236 aa11.29□□□□□ -0.6
HDGFL3-204ENST00000563790 LEO1Q8WVC0 666 aaPredicted RBP11.29□□□□□ -0.6
HDGFL3-204ENST00000563790 TMEM159Q96B96 161 aa11.29□□□□□ -0.6
HDGFL3-204ENST00000563790 DSCC1Q9BVC3 393 aa11.29□□□□□ -0.6
HDGFL3-204ENST00000563790 FOXP3Q9BZS1 431 aa11.29□□□□□ -0.6
HDGFL3-204ENST00000563790 CHST11Q9NPF2 352 aa11.29□□□□□ -0.6
HDGFL3-204ENST00000563790 KLHL11Q9NVR0 708 aa11.29□□□□□ -0.6
HDGFL3-204ENST00000563790 COPG2Q9UBF2 871 aa11.29□□□□□ -0.6
HDGFL3-204ENST00000563790 FBXO10Q9UK96 956 aa11.29□□□□□ -0.6
HDGFL3-204ENST00000563790 TNFSF13BQ9Y275 285 aa11.29□□□□□ -0.6
HDGFL3-204ENST00000563790 CHD3Q12873 2000 aaKnown RBP11.29□□□□□ -0.6
HDGFL3-204ENST00000563790 CNTNAP5Q8WYK1 1306 aa11.29□□□□□ -0.6
HDGFL3-204ENST00000563790 PPP6R2O75170 966 aa11.28□□□□□ -0.6
HDGFL3-204ENST00000563790 MBL2P11226 248 aaPredicted RBP11.28□□□□□ -0.6
HDGFL3-204ENST00000563790 MYL7Q01449 175 aa11.28□□□□□ -0.6
HDGFL3-204ENST00000563790 FOXD4Q12950 439 aaPredicted RBP11.28□□□□□ -0.6
HDGFL3-204ENST00000563790 MMRN1Q13201 1228 aa11.28□□□□□ -0.6
HDGFL3-204ENST00000563790 PPP2R5CQ13362 524 aa11.28□□□□□ -0.6
HDGFL3-204ENST00000563790 CRTC2Q53ET0 693 aaPredicted RBP11.28□□□□□ -0.6
HDGFL3-204ENST00000563790 AHI1Q8N157 1196 aa11.28□□□□□ -0.6
HDGFL3-204ENST00000563790 THEM5Q8N1Q8 247 aa11.28□□□□□ -0.6
HDGFL3-204ENST00000563790 RBBP8NLQ8NC74 664 aaPredicted RBP11.28□□□□□ -0.6
HDGFL3-204ENST00000563790 ETNPPLQ8TBG4 499 aa11.28□□□□□ -0.6
HDGFL3-204ENST00000563790 DSEQ9UL01 958 aa11.28□□□□□ -0.6
HDGFL3-204ENST00000563790 SH3BP1Q9Y3L3 701 aa11.28□□□□□ -0.6
HDGFL3-204ENST00000563790 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.28□□□□□ -0.6
HDGFL3-204ENST00000563790 SVEP1Q4LDE5 3571 aa11.28□□□□□ -0.6
HDGFL3-204ENST00000563790 TRPM6Q9BX84 2022 aa11.28□□□□□ -0.6
HDGFL3-204ENST00000563790 D6RAR5 112 aa11.27□□□□□ -0.61
HDGFL3-204ENST00000563790 LATO43561 262 aa11.27□□□□□ -0.61
HDGFL3-204ENST00000563790 LIG1P18858 919 aa11.27□□□□□ -0.61
HDGFL3-204ENST00000563790 RXRAP19793 462 aa11.27□□□□□ -0.61
HDGFL3-204ENST00000563790 PAX3P23760 479 aa11.27□□□□□ -0.61
HDGFL3-204ENST00000563790 PPP3CCP48454 512 aa11.27□□□□□ -0.61
HDGFL3-204ENST00000563790 COPB1P53618 953 aaKnown RBP11.27□□□□□ -0.61
HDGFL3-204ENST00000563790 RAD51AP2Q09MP3 1159 aa11.27□□□□□ -0.61
HDGFL3-204ENST00000563790 DRAP1Q14919 205 aaPredicted RBP11.27□□□□□ -0.61
HDGFL3-204ENST00000563790 GEN1Q17RS7 908 aa11.27□□□□□ -0.61
HDGFL3-204ENST00000563790 TMEM164Q5U3C3 297 aa11.27□□□□□ -0.61
HDGFL3-204ENST00000563790 HVCN1Q96D96 273 aa11.27□□□□□ -0.61
HDGFL3-204ENST00000563790 TMEM74Q96NL1 305 aa11.27□□□□□ -0.61
HDGFL3-204ENST00000563790 CCDC3Q9BQI4 270 aa11.27□□□□□ -0.61
HDGFL3-204ENST00000563790 ZSWIM4Q9H7M6 989 aa11.27□□□□□ -0.61
HDGFL3-204ENST00000563790 MAP10Q9P2G4 905 aa11.27□□□□□ -0.61
HDGFL3-204ENST00000563790 NCKAP1Q9Y2A7 1128 aa11.27□□□□□ -0.61
HDGFL3-204ENST00000563790 MYH11P35749 1972 aa11.27□□□□□ -0.61
HDGFL3-204ENST00000563790 WNK1Q9H4A3 2382 aa11.26□□□□□ -0.61
HDGFL3-204ENST00000563790 LRRTM2O43300 516 aa11.26□□□□□ -0.61
HDGFL3-204ENST00000563790 KCNAB3O43448 404 aa11.26□□□□□ -0.61
HDGFL3-204ENST00000563790 RFPL1O75677 317 aa11.26□□□□□ -0.61
HDGFL3-204ENST00000563790 NEBLO76041 1014 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms