RNA–Protein interactions for RNA: ENST00000562540.1

DENND4A-205, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 629 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-205ENST00000562540 ZNF212Q9UDV6 495 aa3.66□□□□□ -1.82
DENND4A-205ENST00000562540 MID2Q9UJV3 735 aa3.66□□□□□ -1.82
DENND4A-205ENST00000562540 RIMKLBQ9ULI2 386 aa3.66□□□□□ -1.82
DENND4A-205ENST00000562540 SLC22A23A1A5C7 686 aa3.65□□□□□ -1.83
DENND4A-205ENST00000562540 F8W8V4 182 aa3.65□□□□□ -1.83
DENND4A-205ENST00000562540 RAB27BO00194 218 aa3.65□□□□□ -1.83
DENND4A-205ENST00000562540 CCP110O43303 1012 aa3.65□□□□□ -1.83
DENND4A-205ENST00000562540 RRP9O43818 475 aaKnown RBP3.65□□□□□ -1.83
DENND4A-205ENST00000562540 PRAMEF2O60811 474 aa3.65□□□□□ -1.83
DENND4A-205ENST00000562540 PIAS2O75928 621 aa3.65□□□□□ -1.83
DENND4A-205ENST00000562540 INMTO95050 263 aa3.65□□□□□ -1.83
DENND4A-205ENST00000562540 IGKV3-20P01619 116 aa3.65□□□□□ -1.83
DENND4A-205ENST00000562540 ANXA2P07355 339 aaKnown RBP3.65□□□□□ -1.83
DENND4A-205ENST00000562540 IFIT2P09913 472 aaKnown RBP3.65□□□□□ -1.83
DENND4A-205ENST00000562540 TXNP10599 105 aaKnown RBP3.65□□□□□ -1.83
DENND4A-205ENST00000562540 HOXB2P14652 356 aa3.65□□□□□ -1.83
DENND4A-205ENST00000562540 IL1R1P14778 569 aa3.65□□□□□ -1.83
DENND4A-205ENST00000562540 RPS6KB1P23443 525 aa3.65□□□□□ -1.83
DENND4A-205ENST00000562540 STT3AP46977 705 aa3.65□□□□□ -1.83
DENND4A-205ENST00000562540 PTDSS1P48651 473 aaKnown RBP3.65□□□□□ -1.83
DENND4A-205ENST00000562540 POLD2P49005 469 aa3.65□□□□□ -1.83
DENND4A-205ENST00000562540 CASP5P51878 434 aa3.65□□□□□ -1.83
DENND4A-205ENST00000562540 NEK3P51956 506 aa3.65□□□□□ -1.83
DENND4A-205ENST00000562540 JAK3P52333 1124 aa3.65□□□□□ -1.83
DENND4A-205ENST00000562540 AK2P54819 239 aa3.65□□□□□ -1.83
DENND4A-205ENST00000562540 PTGR1Q14914 329 aa3.65□□□□□ -1.83
DENND4A-205ENST00000562540 NFATC4Q14934 902 aa3.65□□□□□ -1.83
DENND4A-205ENST00000562540 UNC13DQ70J99 1090 aa3.65□□□□□ -1.83
DENND4A-205ENST00000562540 TRAPPC11Q7Z392 1133 aa3.65□□□□□ -1.83
DENND4A-205ENST00000562540 FOXP4Q8IVH2 680 aaPredicted RBP3.65□□□□□ -1.83
DENND4A-205ENST00000562540 C11orf44Q8N8P7 122 aa3.65□□□□□ -1.83
DENND4A-205ENST00000562540 PARD3BQ8TEW8 1205 aa3.65□□□□□ -1.83
DENND4A-205ENST00000562540 MED30Q96HR3 178 aa3.65□□□□□ -1.83
DENND4A-205ENST00000562540 TNIP3Q96KP6 325 aa3.65□□□□□ -1.83
DENND4A-205ENST00000562540 SNX22Q96L94 193 aa3.65□□□□□ -1.83
DENND4A-205ENST00000562540 TBCBQ99426 244 aa3.65□□□□□ -1.83
DENND4A-205ENST00000562540 RBM38Q9H0Z9 239 aaKnown RBP3.65□□□□□ -1.83
DENND4A-205ENST00000562540 MLXIPLQ9NP71 852 aa3.65□□□□□ -1.83
DENND4A-205ENST00000562540 PAPOLBQ9NRJ5 636 aaKnown RBP3.65□□□□□ -1.83
DENND4A-205ENST00000562540 STEAP1Q9UHE8 339 aa3.65□□□□□ -1.83
DENND4A-205ENST00000562540 ANAPC4Q9UJX5 808 aa3.65□□□□□ -1.83
DENND4A-205ENST00000562540 RASA4BC9J798 803 aa3.64□□□□□ -1.83
DENND4A-205ENST00000562540 AGPSO00116 658 aa3.64□□□□□ -1.83
DENND4A-205ENST00000562540 SPTLC2O15270 562 aa3.64□□□□□ -1.83
DENND4A-205ENST00000562540 RASA4O43374 803 aa3.64□□□□□ -1.83
DENND4A-205ENST00000562540 THAP12O43422 761 aa3.64□□□□□ -1.83
DENND4A-205ENST00000562540 MT-ND5P03915 603 aa3.64□□□□□ -1.83
DENND4A-205ENST00000562540 TSHRP16473 764 aa3.64□□□□□ -1.83
DENND4A-205ENST00000562540 HOXA7P31268 230 aaPredicted RBP3.64□□□□□ -1.83
DENND4A-205ENST00000562540 TM4SF4P48230 202 aa3.64□□□□□ -1.83
DENND4A-205ENST00000562540 CPT1AP50416 773 aa3.64□□□□□ -1.83
DENND4A-205ENST00000562540 ZNF543Q08ER8 600 aa3.64□□□□□ -1.83
DENND4A-205ENST00000562540 CCDC15Q0P6D6 951 aa3.64□□□□□ -1.83
DENND4A-205ENST00000562540 STK3Q13188 491 aa3.64□□□□□ -1.83
DENND4A-205ENST00000562540 MTA1Q13330 715 aa3.64□□□□□ -1.83
DENND4A-205ENST00000562540 HDAC1Q13547 482 aaPredicted RBP3.64□□□□□ -1.83
DENND4A-205ENST00000562540 ARHGEF7Q14155 803 aa3.64□□□□□ -1.83
DENND4A-205ENST00000562540 SLC29A2Q14542 456 aa3.64□□□□□ -1.83
DENND4A-205ENST00000562540 BRD3Q15059 726 aa3.64□□□□□ -1.83
DENND4A-205ENST00000562540 MAP9Q49MG5 647 aa3.64□□□□□ -1.83
DENND4A-205ENST00000562540 RNF44Q7L0R7 432 aa3.64□□□□□ -1.83
DENND4A-205ENST00000562540 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.64□□□□□ -1.83
DENND4A-205ENST00000562540 TFAP2DQ7Z6R9 452 aa3.64□□□□□ -1.83
DENND4A-205ENST00000562540 CUZD1Q86UP6 607 aa3.64□□□□□ -1.83
DENND4A-205ENST00000562540 SPATA2LQ8IUW3 424 aaPredicted RBP3.64□□□□□ -1.83
DENND4A-205ENST00000562540 SDR16C5Q8N3Y7 309 aa3.64□□□□□ -1.83
DENND4A-205ENST00000562540 IQCF1Q8N6M8 205 aa3.64□□□□□ -1.83
DENND4A-205ENST00000562540 NUDCD2Q8WVJ2 157 aa3.64□□□□□ -1.83
DENND4A-205ENST00000562540 NEUROG1Q92886 237 aa3.64□□□□□ -1.83
DENND4A-205ENST00000562540 CINPQ9BW66 212 aaPredicted RBP3.64□□□□□ -1.83
DENND4A-205ENST00000562540 SF3B5Q9BWJ5 86 aaKnown RBP3.64□□□□□ -1.83
DENND4A-205ENST00000562540 NAA15Q9BXJ9 866 aaKnown RBP3.64□□□□□ -1.83
DENND4A-205ENST00000562540 CHST8Q9H2A9 424 aa3.64□□□□□ -1.83
DENND4A-205ENST00000562540 STARD7Q9NQZ5 370 aa3.64□□□□□ -1.83
DENND4A-205ENST00000562540 GJB4Q9NTQ9 266 aa3.64□□□□□ -1.83
DENND4A-205ENST00000562540 PHTF1Q9UMS5 762 aa3.64□□□□□ -1.83
DENND4A-205ENST00000562540 PCDHA7Q9UN72 937 aa3.64□□□□□ -1.83
DENND4A-205ENST00000562540 SPATA31A1Q5TZJ5 1347 aa3.64□□□□□ -1.83
DENND4A-205ENST00000562540 TRBV5-3A0A0A0MS03 114 aa3.63□□□□□ -1.83
DENND4A-205ENST00000562540 A0A1W2PPC1 479 aa3.63□□□□□ -1.83
DENND4A-205ENST00000562540 AQP7P3A6NL99 342 aa3.63□□□□□ -1.83
DENND4A-205ENST00000562540 PRSS47A8MTI9 375 aa3.63□□□□□ -1.83
DENND4A-205ENST00000562540 APOL1O14791 398 aa3.63□□□□□ -1.83
DENND4A-205ENST00000562540 CA12O43570 354 aa3.63□□□□□ -1.83
DENND4A-205ENST00000562540 TPH1P17752 444 aa3.63□□□□□ -1.83
DENND4A-205ENST00000562540 TNFSF4P23510 183 aa3.63□□□□□ -1.83
DENND4A-205ENST00000562540 GALNSP34059 522 aa3.63□□□□□ -1.83
DENND4A-205ENST00000562540 KCNJ4P48050 445 aa3.63□□□□□ -1.83
DENND4A-205ENST00000562540 EIF4A1P60842 406 aaKnown RBP3.63□□□□□ -1.83
DENND4A-205ENST00000562540 WDR5P61964 334 aaKnown RBP3.63□□□□□ -1.83
DENND4A-205ENST00000562540 ODF3L2Q3SX64 289 aa3.63□□□□□ -1.83
DENND4A-205ENST00000562540 SYCP2LQ5T4T6 812 aa3.63□□□□□ -1.83
DENND4A-205ENST00000562540 KLHDC7AQ5VTJ3 777 aa3.63□□□□□ -1.83
DENND4A-205ENST00000562540 RBM44Q6ZP01 1051 aaKnown RBP3.63□□□□□ -1.83
DENND4A-205ENST00000562540 ZNF668Q96K58 619 aaPredicted RBP3.63□□□□□ -1.83
DENND4A-205ENST00000562540 DHX36Q9H2U1 1008 aaKnown RBP3.63□□□□□ -1.83
DENND4A-205ENST00000562540 AGO4Q9HCK5 861 aaKnown RBP3.63□□□□□ -1.83
DENND4A-205ENST00000562540 HEYLQ9NQ87 328 aaPredicted RBP3.63□□□□□ -1.83
DENND4A-205ENST00000562540 TBC1D23Q9NUY8 699 aa3.63□□□□□ -1.83
DENND4A-205ENST00000562540 RGS17Q9UGC6 210 aaPredicted RBP3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms