RNA–Protein interactions for RNA: ENST00000561680.5

CMTM4-203, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 2

Gene CMTM4, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-203ENST00000561680 ZXDBP98169 803 aa13.14□□□□□ -0.31
CMTM4-203ENST00000561680 RPS6KA1Q15418 735 aa13.14□□□□□ -0.31
CMTM4-203ENST00000561680 CCDC85BQ15834 202 aaPredicted RBP13.14□□□□□ -0.31
CMTM4-203ENST00000561680 BOLA3Q53S33 107 aa13.14□□□□□ -0.31
CMTM4-203ENST00000561680 ERMARDQ5T6L9 678 aa13.14□□□□□ -0.31
CMTM4-203ENST00000561680 GET4Q7L5D6 327 aaPredicted RBP13.14□□□□□ -0.31
CMTM4-203ENST00000561680 KATNAL2Q8IYT4 538 aa13.14□□□□□ -0.31
CMTM4-203ENST00000561680 UBL4BQ8N7F7 174 aa13.14□□□□□ -0.31
CMTM4-203ENST00000561680 ADAMTS19Q8TE59 1207 aa13.14□□□□□ -0.31
CMTM4-203ENST00000561680 SUSD6Q92537 303 aa13.14□□□□□ -0.31
CMTM4-203ENST00000561680 RNF34Q969K3 372 aa13.14□□□□□ -0.31
CMTM4-203ENST00000561680 ZSWIM3Q96MP5 696 aa13.14□□□□□ -0.31
CMTM4-203ENST00000561680 TKTL2Q9H0I9 626 aa13.14□□□□□ -0.31
CMTM4-203ENST00000561680 ANLNQ9NQW6 1124 aa13.14□□□□□ -0.31
CMTM4-203ENST00000561680 SMPD4Q9NXE4 827 aa13.14□□□□□ -0.31
CMTM4-203ENST00000561680 DDX56Q9NY93 547 aaKnown RBP13.14□□□□□ -0.31
CMTM4-203ENST00000561680 GDE1Q9NZC3 331 aa13.14□□□□□ -0.31
CMTM4-203ENST00000561680 AP4E1Q9UPM8 1137 aa13.14□□□□□ -0.31
CMTM4-203ENST00000561680 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.14□□□□□ -0.31
CMTM4-203ENST00000561680 COL4A2P08572 1712 aa13.13□□□□□ -0.31
CMTM4-203ENST00000561680 MYO18AQ92614 2054 aaKnown RBP13.13□□□□□ -0.31
CMTM4-203ENST00000561680 PRAMEF12O95522 483 aa13.13□□□□□ -0.31
CMTM4-203ENST00000561680 HMBSP08397 361 aa13.13□□□□□ -0.31
CMTM4-203ENST00000561680 TCF3P15923 654 aa13.13□□□□□ -0.31
CMTM4-203ENST00000561680 CASQ1P31415 396 aa13.13□□□□□ -0.31
CMTM4-203ENST00000561680 KCNQ1P51787 676 aa13.13□□□□□ -0.31
CMTM4-203ENST00000561680 RWDD2BP57060 319 aa13.13□□□□□ -0.31
CMTM4-203ENST00000561680 USP4Q13107 963 aa13.13□□□□□ -0.31
CMTM4-203ENST00000561680 MTA1Q13330 715 aa13.13□□□□□ -0.31
CMTM4-203ENST00000561680 CLUL1Q15846 466 aa13.13□□□□□ -0.31
CMTM4-203ENST00000561680 DPYSL2Q16555 572 aa13.13□□□□□ -0.31
CMTM4-203ENST00000561680 ARL13BQ3SXY8 428 aa13.13□□□□□ -0.31
CMTM4-203ENST00000561680 ATP13A4Q4VNC1 1196 aa13.13□□□□□ -0.31
CMTM4-203ENST00000561680 EFHC2Q5JST6 749 aa13.13□□□□□ -0.31
CMTM4-203ENST00000561680 KCNT1Q5JUK3 1230 aa13.13□□□□□ -0.31
CMTM4-203ENST00000561680 DCAF12L1Q5VU92 463 aa13.13□□□□□ -0.31
CMTM4-203ENST00000561680 DDX42Q86XP3 938 aaKnown RBP eCLIP13.13□□□□□ -0.31
CMTM4-203ENST00000561680 UNC45BQ8IWX7 931 aa13.13□□□□□ -0.31
CMTM4-203ENST00000561680 ATP6V0D2Q8N8Y2 350 aa13.13□□□□□ -0.31
CMTM4-203ENST00000561680 FAM71BQ8TC56 605 aa13.13□□□□□ -0.31
CMTM4-203ENST00000561680 FGF13Q92913 245 aa13.13□□□□□ -0.31
CMTM4-203ENST00000561680 USP13Q92995 863 aaPredicted RBP13.13□□□□□ -0.31
CMTM4-203ENST00000561680 BTN2A3PQ96KV6 586 aa13.13□□□□□ -0.31
CMTM4-203ENST00000561680 NECTIN4Q96NY8 510 aa13.13□□□□□ -0.31
CMTM4-203ENST00000561680 HAPLN3Q96S86 360 aa13.13□□□□□ -0.31
CMTM4-203ENST00000561680 POMKQ9H5K3 350 aa13.13□□□□□ -0.31
CMTM4-203ENST00000561680 TMPRSS4Q9NRS4 437 aa13.13□□□□□ -0.31
CMTM4-203ENST00000561680 GKN1Q9NS71 199 aa13.13□□□□□ -0.31
CMTM4-203ENST00000561680 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.13□□□□□ -0.31
CMTM4-203ENST00000561680 KLHL11Q9NVR0 708 aa13.13□□□□□ -0.31
CMTM4-203ENST00000561680 GPATCH2LQ9NWQ4 482 aa13.13□□□□□ -0.31
CMTM4-203ENST00000561680 CDH7Q9ULB5 785 aa13.13□□□□□ -0.31
CMTM4-203ENST00000561680 USP15Q9Y4E8 981 aaPredicted RBP13.13□□□□□ -0.31
CMTM4-203ENST00000561680 PRUNE2Q8WUY3 3088 aa13.12□□□□□ -0.31
CMTM4-203ENST00000561680 C3orf70A6NLC5 250 aaPredicted RBP13.12□□□□□ -0.31
CMTM4-203ENST00000561680 H3BQ06 376 aaPredicted RBP13.12□□□□□ -0.31
CMTM4-203ENST00000561680 GREM1O60565 184 aa13.12□□□□□ -0.31
CMTM4-203ENST00000561680 PAGE1O75459 146 aa13.12□□□□□ -0.31
CMTM4-203ENST00000561680 LATS1O95835 1130 aa13.12□□□□□ -0.31
CMTM4-203ENST00000561680 MOCS2O96007 188 aaPredicted RBP13.12□□□□□ -0.31
CMTM4-203ENST00000561680 KRT1P04264 644 aa13.12□□□□□ -0.31
CMTM4-203ENST00000561680 IRF1P10914 325 aa13.12□□□□□ -0.31
CMTM4-203ENST00000561680 KCNA5P22460 613 aa13.12□□□□□ -0.31
CMTM4-203ENST00000561680 CORO1AP31146 461 aaKnown RBP13.12□□□□□ -0.31
CMTM4-203ENST00000561680 HARS2P49590 506 aaKnown RBP13.12□□□□□ -0.31
CMTM4-203ENST00000561680 DNA2P51530 1060 aa13.12□□□□□ -0.31
CMTM4-203ENST00000561680 ARSEP51690 589 aa13.12□□□□□ -0.31
CMTM4-203ENST00000561680 AMPD2Q01433 879 aa13.12□□□□□ -0.31
CMTM4-203ENST00000561680 SEMA3BQ13214 749 aa13.12□□□□□ -0.31
CMTM4-203ENST00000561680 SMAD4Q13485 552 aaKnown RBP13.12□□□□□ -0.31
CMTM4-203ENST00000561680 CBX2Q14781 532 aaPredicted RBP13.12□□□□□ -0.31
CMTM4-203ENST00000561680 CA9Q16790 459 aa13.12□□□□□ -0.31
CMTM4-203ENST00000561680 PAPD7Q5XG87 772 aaKnown RBP13.12□□□□□ -0.31
CMTM4-203ENST00000561680 Q6ZNB5 142 aa13.12□□□□□ -0.31
CMTM4-203ENST00000561680 VSIG1Q86XK7 387 aa13.12□□□□□ -0.31
CMTM4-203ENST00000561680 ARID3BQ8IVW6 561 aaPredicted RBP13.12□□□□□ -0.31
CMTM4-203ENST00000561680 EXD1Q8NHP7 514 aa13.12□□□□□ -0.31
CMTM4-203ENST00000561680 ZSCAN18Q8TBC5 510 aaPredicted RBP13.12□□□□□ -0.31
CMTM4-203ENST00000561680 HSPH1Q92598 858 aa13.12□□□□□ -0.31
CMTM4-203ENST00000561680 WBP2Q969T9 261 aa13.12□□□□□ -0.31
CMTM4-203ENST00000561680 AZIN2Q96A70 460 aa13.12□□□□□ -0.31
CMTM4-203ENST00000561680 ACSF2Q96CM8 615 aaPredicted RBP13.12□□□□□ -0.31
CMTM4-203ENST00000561680 ASB16Q96NS5 453 aa13.12□□□□□ -0.31
CMTM4-203ENST00000561680 SMG9Q9H0W8 520 aaKnown RBP13.12□□□□□ -0.31
CMTM4-203ENST00000561680 OSBPL2Q9H1P3 480 aa13.12□□□□□ -0.31
CMTM4-203ENST00000561680 CARD9Q9H257 536 aa13.12□□□□□ -0.31
CMTM4-203ENST00000561680 KIF9Q9HAQ2 790 aa13.12□□□□□ -0.31
CMTM4-203ENST00000561680 TDP1Q9NUW8 608 aa13.12□□□□□ -0.31
CMTM4-203ENST00000561680 XPO7Q9UIA9 1087 aaKnown RBP13.12□□□□□ -0.31
CMTM4-203ENST00000561680 SNX12Q9UMY4 172 aa13.12□□□□□ -0.31
CMTM4-203ENST00000561680 CCL26Q9Y258 94 aa13.12□□□□□ -0.31
CMTM4-203ENST00000561680 TCF20Q9UGU0 1960 aaKnown RBP13.12□□□□□ -0.31
CMTM4-203ENST00000561680 LRRD1A4D1F6 860 aa13.11□□□□□ -0.31
CMTM4-203ENST00000561680 GRXCR2A6NFK2 248 aa13.11□□□□□ -0.31
CMTM4-203ENST00000561680 LEFTY2O00292 366 aa13.11□□□□□ -0.31
CMTM4-203ENST00000561680 KCNK3O14649 394 aa13.11□□□□□ -0.31
CMTM4-203ENST00000561680 KLKB1P03952 638 aa13.11□□□□□ -0.31
CMTM4-203ENST00000561680 L1CAMP32004 1257 aa13.11□□□□□ -0.31
CMTM4-203ENST00000561680 CDH6P55285 790 aa13.11□□□□□ -0.31
CMTM4-203ENST00000561680 NRG1Q02297 640 aaPredicted RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms