RNA–Protein interactions for RNA: ENST00000559276.5

USP3-212, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-212ENST00000559276 NHEJ1Q9H9Q4 299 aaPredicted RBP6.17□□□□□ -1.42
USP3-212ENST00000559276 CD248Q9HCU0 757 aa6.17□□□□□ -1.42
USP3-212ENST00000559276 ZDHHC4Q9NPG8 344 aa6.17□□□□□ -1.42
USP3-212ENST00000559276 VPS45Q9NRW7 570 aa6.17□□□□□ -1.42
USP3-212ENST00000559276 SMPD4Q9NXE4 827 aa6.17□□□□□ -1.42
USP3-212ENST00000559276 IL37Q9NZH6 218 aa6.17□□□□□ -1.42
USP3-212ENST00000559276 MBD1Q9UIS9 605 aaPredicted RBP6.17□□□□□ -1.42
USP3-212ENST00000559276 RALYQ9UKM9 306 aaKnown RBP6.17□□□□□ -1.42
USP3-212ENST00000559276 MMP17Q9ULZ9 603 aa6.17□□□□□ -1.42
USP3-212ENST00000559276 CPQQ9Y646 472 aa6.17□□□□□ -1.42
USP3-212ENST00000559276 CEP295Q9C0D2 2601 aa6.17□□□□□ -1.42
USP3-212ENST00000559276 CEP192Q8TEP8 1941 aa6.17□□□□□ -1.42
USP3-212ENST00000559276 ADAMTS9Q9P2N4 1935 aa6.17□□□□□ -1.42
USP3-212ENST00000559276 PCDH15Q96QU1 1955 aa6.17□□□□□ -1.42
USP3-212ENST00000559276 CNOT1A5YKK6 2376 aaKnown RBP6.16□□□□□ -1.42
USP3-212ENST00000559276 PVALEFA0A1B0GWK0 134 aa6.16□□□□□ -1.42
USP3-212ENST00000559276 FAM92AA1XBS5 289 aa6.16□□□□□ -1.42
USP3-212ENST00000559276 C4orf47A7E2U8 309 aa6.16□□□□□ -1.42
USP3-212ENST00000559276 BTNL10A8MVZ5 291 aa6.16□□□□□ -1.42
USP3-212ENST00000559276 TRIM24O15164 1050 aa6.16□□□□□ -1.42
USP3-212ENST00000559276 CLIC2O15247 247 aa6.16□□□□□ -1.42
USP3-212ENST00000559276 EIF3DO15371 548 aaKnown RBP eCLIP6.16□□□□□ -1.42
USP3-212ENST00000559276 COCHO43405 550 aa6.16□□□□□ -1.42
USP3-212ENST00000559276 PHACTR2O75167 634 aa6.16□□□□□ -1.42
USP3-212ENST00000559276 BEST1O76090 585 aa6.16□□□□□ -1.42
USP3-212ENST00000559276 VNN1O95497 513 aa6.16□□□□□ -1.42
USP3-212ENST00000559276 NFATC1O95644 943 aa6.16□□□□□ -1.42
USP3-212ENST00000559276 STAU1O95793 577 aaKnown RBP6.16□□□□□ -1.42
USP3-212ENST00000559276 TNNC2P02585 160 aa6.16□□□□□ -1.42
USP3-212ENST00000559276 FAM163BP0C2L3 166 aa6.16□□□□□ -1.42
USP3-212ENST00000559276 ZDHHC11BP0C7U3 371 aa6.16□□□□□ -1.42
USP3-212ENST00000559276 DLATP10515 647 aaKnown RBP6.16□□□□□ -1.42
USP3-212ENST00000559276 PFKLP17858 780 aa6.16□□□□□ -1.42
USP3-212ENST00000559276 BRD2P25440 801 aaKnown RBP6.16□□□□□ -1.42
USP3-212ENST00000559276 GNL1P36915 607 aaPredicted RBP6.16□□□□□ -1.42
USP3-212ENST00000559276 CASP4P49662 377 aa6.16□□□□□ -1.42
USP3-212ENST00000559276 DGKEP52429 567 aa6.16□□□□□ -1.42
USP3-212ENST00000559276 CDH8P55286 799 aa6.16□□□□□ -1.42
USP3-212ENST00000559276 GSCP56915 257 aaPredicted RBP6.16□□□□□ -1.42
USP3-212ENST00000559276 GNGT1P63211 74 aa6.16□□□□□ -1.42
USP3-212ENST00000559276 CLDN10P78369 228 aa6.16□□□□□ -1.42
USP3-212ENST00000559276 IRX4P78413 519 aa6.16□□□□□ -1.42
USP3-212ENST00000559276 LRRC63Q05C16 580 aa6.16□□□□□ -1.42
USP3-212ENST00000559276 PSMD2Q13200 908 aa6.16□□□□□ -1.42
USP3-212ENST00000559276 SURF1Q15526 300 aa6.16□□□□□ -1.42
USP3-212ENST00000559276 BMT2Q1RMZ1 405 aa6.16□□□□□ -1.42
USP3-212ENST00000559276 MAP7D1Q3KQU3 841 aa6.16□□□□□ -1.42
USP3-212ENST00000559276 WDR72Q3MJ13 1102 aa6.16□□□□□ -1.42
USP3-212ENST00000559276 SPDYCQ5MJ68 293 aa6.16□□□□□ -1.42
USP3-212ENST00000559276 C10orf76Q5T2E6 689 aa6.16□□□□□ -1.42
USP3-212ENST00000559276 SNX30Q5VWJ9 437 aa6.16□□□□□ -1.42
USP3-212ENST00000559276 RNF43Q68DV7 783 aa6.16□□□□□ -1.42
USP3-212ENST00000559276 ANO7Q6IWH7 933 aa6.16□□□□□ -1.42
USP3-212ENST00000559276 PSAPL1Q6NUJ1 521 aa6.16□□□□□ -1.42
USP3-212ENST00000559276 LRIG3Q6UXM1 1119 aa6.16□□□□□ -1.42
USP3-212ENST00000559276 SND1Q7KZF4 910 aaKnown RBP eCLIP6.16□□□□□ -1.42
USP3-212ENST00000559276 MIB1Q86YT6 1006 aa6.16□□□□□ -1.42
USP3-212ENST00000559276 CREG2Q8IUH2 290 aa6.16□□□□□ -1.42
USP3-212ENST00000559276 ETFBKMTQ8IXQ9 262 aa6.16□□□□□ -1.42
USP3-212ENST00000559276 C12orf56Q8IXR9 622 aa6.16□□□□□ -1.42
USP3-212ENST00000559276 CCDC65Q8IXS2 484 aa6.16□□□□□ -1.42
USP3-212ENST00000559276 ALLCQ8N6M5 410 aa6.16□□□□□ -1.42
USP3-212ENST00000559276 TXNDC5Q8NBS9 432 aaKnown RBP6.16□□□□□ -1.42
USP3-212ENST00000559276 SPATA4Q8NEY3 305 aa6.16□□□□□ -1.42
USP3-212ENST00000559276 ZMIZ2Q8NF64 920 aa6.16□□□□□ -1.42
USP3-212ENST00000559276 TSTD1Q8NFU3 115 aa6.16□□□□□ -1.42
USP3-212ENST00000559276 SCAMP5Q8TAC9 235 aa6.16□□□□□ -1.42
USP3-212ENST00000559276 MAGEC3Q8TD91 643 aa6.16□□□□□ -1.42
USP3-212ENST00000559276 ACDQ96AP0 544 aa6.16□□□□□ -1.42
USP3-212ENST00000559276 CCDC127Q96BQ5 260 aa6.16□□□□□ -1.42
USP3-212ENST00000559276 CABS1Q96KC9 395 aa6.16□□□□□ -1.42
USP3-212ENST00000559276 NOX5Q96PH1 765 aa6.16□□□□□ -1.42
USP3-212ENST00000559276 CHP1Q99653 195 aa6.16□□□□□ -1.42
USP3-212ENST00000559276 C7orf25Q9BPX7 421 aa6.16□□□□□ -1.42
USP3-212ENST00000559276 EDEM2Q9BV94 578 aa6.16□□□□□ -1.42
USP3-212ENST00000559276 EPN3Q9H201 632 aa6.16□□□□□ -1.42
USP3-212ENST00000559276 SMYD3Q9H7B4 428 aa6.16□□□□□ -1.42
USP3-212ENST00000559276 VRTNQ9H8Y1 702 aa6.16□□□□□ -1.42
USP3-212ENST00000559276 ACTR5Q9H9F9 607 aaPredicted RBP6.16□□□□□ -1.42
USP3-212ENST00000559276 TMEM74BQ9NUR3 256 aa6.16□□□□□ -1.42
USP3-212ENST00000559276 TRPM5Q9NZQ8 1165 aa6.16□□□□□ -1.42
USP3-212ENST00000559276 CFAP97Q9P2B7 532 aa6.16□□□□□ -1.42
USP3-212ENST00000559276 ANGPTL2Q9UKU9 493 aa6.16□□□□□ -1.42
USP3-212ENST00000559276 DMXL2Q8TDJ6 3036 aa6.15□□□□□ -1.42
USP3-212ENST00000559276 LAMA5O15230 3695 aa6.15□□□□□ -1.42
USP3-212ENST00000559276 NBEAQ8NFP9 2946 aa6.15□□□□□ -1.42
USP3-212ENST00000559276 A0A0U1RQJ8 604 aa6.15□□□□□ -1.42
USP3-212ENST00000559276 GOLGA6L7A0A1B0GV03 622 aa6.15□□□□□ -1.42
USP3-212ENST00000559276 GOLGA6L10A6NI86 522 aa6.15□□□□□ -1.42
USP3-212ENST00000559276 C1QTNF9BB2RNN3 333 aa6.15□□□□□ -1.42
USP3-212ENST00000559276 NDUFAB1O14561 156 aa6.15□□□□□ -1.42
USP3-212ENST00000559276 KLRC4O43908 158 aa6.15□□□□□ -1.42
USP3-212ENST00000559276 RHOBTB1O94844 696 aa6.15□□□□□ -1.42
USP3-212ENST00000559276 KAT7O95251 611 aa6.15□□□□□ -1.42
USP3-212ENST00000559276 KLF8O95600 359 aaPredicted RBP6.15□□□□□ -1.42
USP3-212ENST00000559276 C4BPAP04003 597 aaKnown RBP6.15□□□□□ -1.42
USP3-212ENST00000559276 C1QTNF9P0C862 333 aa6.15□□□□□ -1.42
USP3-212ENST00000559276 SPINK2P20155 84 aa6.15□□□□□ -1.42
USP3-212ENST00000559276 TIE1P35590 1138 aa6.15□□□□□ -1.42
USP3-212ENST00000559276 EIF2DP41214 584 aaKnown RBP6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms