RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 CCT4P50991 539 aaKnown RBP3.88□□□□□ -1.79
SPG11-206ENST00000558093 SLC12A2P55011 1212 aa3.88□□□□□ -1.79
SPG11-206ENST00000558093 ACSM6Q6P461 480 aa3.88□□□□□ -1.79
SPG11-206ENST00000558093 SKAP1Q86WV1 359 aa3.88□□□□□ -1.79
SPG11-206ENST00000558093 GATAD2AQ86YP4 633 aa3.88□□□□□ -1.79
SPG11-206ENST00000558093 C16orf52Q8NHV5 167 aa3.88□□□□□ -1.79
SPG11-206ENST00000558093 KAT2BQ92831 832 aa3.88□□□□□ -1.79
SPG11-206ENST00000558093 TRMT61AQ96FX7 289 aaKnown RBP3.88□□□□□ -1.79
SPG11-206ENST00000558093 HMCESQ96FZ2 354 aa3.88□□□□□ -1.79
SPG11-206ENST00000558093 PRPF18Q99633 342 aaKnown RBP3.88□□□□□ -1.79
SPG11-206ENST00000558093 GDF15Q99988 308 aa3.88□□□□□ -1.79
SPG11-206ENST00000558093 TM2D2Q9BX73 214 aa3.88□□□□□ -1.79
SPG11-206ENST00000558093 STK33Q9BYT3 514 aa3.88□□□□□ -1.79
SPG11-206ENST00000558093 CDCP1Q9H5V8 836 aa3.88□□□□□ -1.79
SPG11-206ENST00000558093 TMEM8AQ9HCN3 771 aa3.88□□□□□ -1.79
SPG11-206ENST00000558093 FNIP2Q9P278 1114 aa3.88□□□□□ -1.79
SPG11-206ENST00000558093 IPO11Q9UI26 975 aaKnown RBP3.88□□□□□ -1.79
SPG11-206ENST00000558093 AFG3L2Q9Y4W6 797 aa3.88□□□□□ -1.79
SPG11-206ENST00000558093 PRYO14603 147 aa3.87□□□□□ -1.79
SPG11-206ENST00000558093 ITGA5P08648 1049 aa3.87□□□□□ -1.79
SPG11-206ENST00000558093 TFEBP19484 476 aa3.87□□□□□ -1.79
SPG11-206ENST00000558093 RPS6KB1P23443 525 aa3.87□□□□□ -1.79
SPG11-206ENST00000558093 HOXD12P35452 270 aa3.87□□□□□ -1.79
SPG11-206ENST00000558093 AGTR2P50052 363 aa3.87□□□□□ -1.79
SPG11-206ENST00000558093 GAB1Q13480 694 aa3.87□□□□□ -1.79
SPG11-206ENST00000558093 HDAC1Q13547 482 aaPredicted RBP3.87□□□□□ -1.79
SPG11-206ENST00000558093 BRD3Q15059 726 aa3.87□□□□□ -1.79
SPG11-206ENST00000558093 ANXA2RQ3ZCQ2 193 aa3.87□□□□□ -1.79
SPG11-206ENST00000558093 MAP9Q49MG5 647 aa3.87□□□□□ -1.79
SPG11-206ENST00000558093 DGKKQ5KSL6 1271 aa3.87□□□□□ -1.79
SPG11-206ENST00000558093 C10orf25Q5T742 122 aa3.87□□□□□ -1.79
SPG11-206ENST00000558093 ANKRD40Q6AI12 368 aa3.87□□□□□ -1.79
SPG11-206ENST00000558093 MSANTD2Q6P1R3 559 aa3.87□□□□□ -1.79
SPG11-206ENST00000558093 XRRA1Q6P2D8 792 aa3.87□□□□□ -1.79
SPG11-206ENST00000558093 DHRS13Q6UX07 377 aa3.87□□□□□ -1.79
SPG11-206ENST00000558093 KYAT3Q6YP21 454 aaKnown RBP3.87□□□□□ -1.79
SPG11-206ENST00000558093 RBM44Q6ZP01 1051 aaKnown RBP3.87□□□□□ -1.79
SPG11-206ENST00000558093 TFAP2DQ7Z6R9 452 aa3.87□□□□□ -1.79
SPG11-206ENST00000558093 ADGRF4Q8IZF3 695 aa3.87□□□□□ -1.79
SPG11-206ENST00000558093 SLC22A17Q8WUG5 538 aa3.87□□□□□ -1.79
SPG11-206ENST00000558093 WDR60Q8WVS4 1066 aa3.87□□□□□ -1.79
SPG11-206ENST00000558093 GLMPQ8WWB7 406 aa3.87□□□□□ -1.79
SPG11-206ENST00000558093 CELF1Q92879 486 aaKnown RBP3.87□□□□□ -1.79
SPG11-206ENST00000558093 GJA10Q969M2 543 aa3.87□□□□□ -1.79
SPG11-206ENST00000558093 C18orf8Q96DM3 657 aa3.87□□□□□ -1.79
SPG11-206ENST00000558093 ZNF48Q96MX3 618 aaPredicted RBP3.87□□□□□ -1.79
SPG11-206ENST00000558093 TTLL2Q9BWV7 592 aa3.87□□□□□ -1.79
SPG11-206ENST00000558093 PRDM16Q9HAZ2 1276 aa3.87□□□□□ -1.79
SPG11-206ENST00000558093 FSCN3Q9NQT6 498 aa3.87□□□□□ -1.79
SPG11-206ENST00000558093 RXFP3Q9NSD7 469 aa3.87□□□□□ -1.79
SPG11-206ENST00000558093 TMEM45AQ9NWC5 275 aa3.87□□□□□ -1.79
SPG11-206ENST00000558093 CDC23Q9UJX2 597 aa3.87□□□□□ -1.79
SPG11-206ENST00000558093 SLC8A2Q9UPR5 921 aa3.87□□□□□ -1.79
SPG11-206ENST00000558093 LRCH1Q9Y2L9 728 aa3.87□□□□□ -1.79
SPG11-206ENST00000558093 DTNAQ9Y4J8 743 aa3.87□□□□□ -1.79
SPG11-206ENST00000558093 PCDHB7Q9Y5E2 793 aa3.87□□□□□ -1.79
SPG11-206ENST00000558093 ZMYM2Q9UBW7 1377 aa3.87□□□□□ -1.79
SPG11-206ENST00000558093 SLC22A23A1A5C7 686 aa3.86□□□□□ -1.79
SPG11-206ENST00000558093 C2CD4BA6NLJ0 364 aa3.86□□□□□ -1.79
SPG11-206ENST00000558093 F8W810 466 aa3.86□□□□□ -1.79
SPG11-206ENST00000558093 PCDH17O14917 1159 aa3.86□□□□□ -1.79
SPG11-206ENST00000558093 TLR2O60603 784 aa3.86□□□□□ -1.79
SPG11-206ENST00000558093 PLA2G6O60733 806 aa3.86□□□□□ -1.79
SPG11-206ENST00000558093 TAF5LO75529 589 aa3.86□□□□□ -1.79
SPG11-206ENST00000558093 TMEM191BP0C7N4 346 aa3.86□□□□□ -1.79
SPG11-206ENST00000558093 CTSAP10619 480 aa3.86□□□□□ -1.79
SPG11-206ENST00000558093 AKR1A1P14550 325 aa3.86□□□□□ -1.79
SPG11-206ENST00000558093 NPPBP16860 134 aa3.86□□□□□ -1.79
SPG11-206ENST00000558093 SCP2P22307 547 aa3.86□□□□□ -1.79
SPG11-206ENST00000558093 THBS4P35443 961 aa3.86□□□□□ -1.79
SPG11-206ENST00000558093 PPM1AP35813 382 aa3.86□□□□□ -1.79
SPG11-206ENST00000558093 STAT6P42226 847 aa3.86□□□□□ -1.79
SPG11-206ENST00000558093 RNASELQ05823 741 aaKnown RBP3.86□□□□□ -1.79
SPG11-206ENST00000558093 SYCP2LQ5T4T6 812 aa3.86□□□□□ -1.79
SPG11-206ENST00000558093 LRCH2Q5VUJ6 765 aa3.86□□□□□ -1.79
SPG11-206ENST00000558093 RINT1Q6NUQ1 792 aa3.86□□□□□ -1.79
SPG11-206ENST00000558093 WDR93Q6P2C0 686 aa3.86□□□□□ -1.79
SPG11-206ENST00000558093 C16orf89Q6UX73 402 aa3.86□□□□□ -1.79
SPG11-206ENST00000558093 FAM57BQ71RH2 274 aa3.86□□□□□ -1.79
SPG11-206ENST00000558093 NOL8Q76FK4 1167 aaKnown RBP3.86□□□□□ -1.79
SPG11-206ENST00000558093 NRACQ8N912 160 aa3.86□□□□□ -1.79
SPG11-206ENST00000558093 ASB12Q8WXK4 309 aa3.86□□□□□ -1.79
SPG11-206ENST00000558093 COQ8BQ96D53 544 aa3.86□□□□□ -1.79
SPG11-206ENST00000558093 TMEM79Q9BSE2 394 aa3.86□□□□□ -1.79
SPG11-206ENST00000558093 ABHD14AQ9BUJ0 271 aa3.86□□□□□ -1.79
SPG11-206ENST00000558093 ELOVL1Q9BW60 279 aa3.86□□□□□ -1.79
SPG11-206ENST00000558093 FOXP1Q9H334 677 aaPredicted RBP3.86□□□□□ -1.79
SPG11-206ENST00000558093 SEMA5BQ9P283 1151 aa3.86□□□□□ -1.79
SPG11-206ENST00000558093 EMSYQ7Z589 1322 aa3.86□□□□□ -1.79
SPG11-206ENST00000558093 C16orf96A6NNT2 1141 aa3.85□□□□□ -1.79
SPG11-206ENST00000558093 M0QZQ0 153 aa3.85□□□□□ -1.79
SPG11-206ENST00000558093 ASNA1O43681 348 aa3.85□□□□□ -1.79
SPG11-206ENST00000558093 NTSR2O95665 410 aa3.85□□□□□ -1.79
SPG11-206ENST00000558093 CER1O95813 267 aa3.85□□□□□ -1.79
SPG11-206ENST00000558093 ENO1P06733 434 aaKnown RBP3.85□□□□□ -1.79
SPG11-206ENST00000558093 ANXA6P08133 673 aa3.85□□□□□ -1.79
SPG11-206ENST00000558093 PRF1P14222 555 aa3.85□□□□□ -1.79
SPG11-206ENST00000558093 HOXA7P31268 230 aaPredicted RBP3.85□□□□□ -1.79
SPG11-206ENST00000558093 IDUAP35475 653 aa3.85□□□□□ -1.79
SPG11-206ENST00000558093 LAMB3Q13751 1172 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms