RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 ZNF335Q9H4Z2 1342 aaPredicted RBP1.95□□□□□ -2.1
HIF1A-212ENST00000557538 A0A087X1B8 175 aa1.95□□□□□ -2.1
HIF1A-212ENST00000557538 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP1.95□□□□□ -2.1
HIF1A-212ENST00000557538 TCRBV5S1A1TA0A578 114 aa1.95□□□□□ -2.1
HIF1A-212ENST00000557538 J3KTA2 159 aa1.95□□□□□ -2.1
HIF1A-212ENST00000557538 C1QL1O75973 258 aa1.95□□□□□ -2.1
HIF1A-212ENST00000557538 GCP02774 474 aa1.95□□□□□ -2.1
HIF1A-212ENST00000557538 CREB1P16220 341 aa1.95□□□□□ -2.1
HIF1A-212ENST00000557538 HOXD12P35452 270 aa1.95□□□□□ -2.1
HIF1A-212ENST00000557538 ADPRHP54922 357 aa1.95□□□□□ -2.1
HIF1A-212ENST00000557538 INHBCP55103 352 aa1.95□□□□□ -2.1
HIF1A-212ENST00000557538 SIM1P81133 766 aaPredicted RBP1.95□□□□□ -2.1
HIF1A-212ENST00000557538 DMWDQ09019 674 aa1.95□□□□□ -2.1
HIF1A-212ENST00000557538 THOC5Q13769 683 aaKnown RBP1.95□□□□□ -2.1
HIF1A-212ENST00000557538 ANKRD1Q15327 319 aa1.95□□□□□ -2.1
HIF1A-212ENST00000557538 GALNTL6Q49A17 601 aa1.95□□□□□ -2.1
HIF1A-212ENST00000557538 TMEM196Q5HYL7 178 aa1.95□□□□□ -2.1
HIF1A-212ENST00000557538 CBWD5Q5RIA9 395 aa1.95□□□□□ -2.1
HIF1A-212ENST00000557538 SULT6B1Q6IMI4 303 aa1.95□□□□□ -2.1
HIF1A-212ENST00000557538 RINT1Q6NUQ1 792 aa1.95□□□□□ -2.1
HIF1A-212ENST00000557538 INO80CQ6PI98 192 aaPredicted RBP1.95□□□□□ -2.1
HIF1A-212ENST00000557538 CLEC4GQ6UXB4 293 aa1.95□□□□□ -2.1
HIF1A-212ENST00000557538 MRGPRGQ86SM5 289 aa1.95□□□□□ -2.1
HIF1A-212ENST00000557538 CCDC117Q8IWD4 279 aaPredicted RBP1.95□□□□□ -2.1
HIF1A-212ENST00000557538 SLC22A17Q8WUG5 538 aa1.95□□□□□ -2.1
HIF1A-212ENST00000557538 CPT1BQ92523 772 aa1.95□□□□□ -2.1
HIF1A-212ENST00000557538 HTRA1Q92743 480 aa1.95□□□□□ -2.1
HIF1A-212ENST00000557538 VPS50Q96JG6 964 aa1.95□□□□□ -2.1
HIF1A-212ENST00000557538 TXNRD2Q9NNW7 524 aa1.95□□□□□ -2.1
HIF1A-212ENST00000557538 ITM2CQ9NQX7 267 aa1.95□□□□□ -2.1
HIF1A-212ENST00000557538 COX11Q9Y6N1 276 aa1.95□□□□□ -2.1
HIF1A-212ENST00000557538 HMCN1Q96RW7 5635 aa1.95□□□□□ -2.1
HIF1A-212ENST00000557538 CCDC189A1A4V9 331 aa1.94□□□□□ -2.1
HIF1A-212ENST00000557538 KCNJ18B7U540 433 aa1.94□□□□□ -2.1
HIF1A-212ENST00000557538 E7EVH7 732 aa1.94□□□□□ -2.1
HIF1A-212ENST00000557538 PPP6R2O75170 966 aa1.94□□□□□ -2.1
HIF1A-212ENST00000557538 USP12O75317 370 aa1.94□□□□□ -2.1
HIF1A-212ENST00000557538 ZNF202O95125 648 aa1.94□□□□□ -2.1
HIF1A-212ENST00000557538 TNFRSF6BO95407 300 aa1.94□□□□□ -2.1
HIF1A-212ENST00000557538 MT-CO3P00414 261 aa1.94□□□□□ -2.1
HIF1A-212ENST00000557538 IGHMBP2P38935 993 aaKnown RBP1.94□□□□□ -2.1
HIF1A-212ENST00000557538 PNPLA4P41247 253 aa1.94□□□□□ -2.1
HIF1A-212ENST00000557538 GPD2P43304 727 aa1.94□□□□□ -2.1
HIF1A-212ENST00000557538 TXNL4AP83876 142 aaKnown RBP1.94□□□□□ -2.1
HIF1A-212ENST00000557538 HSF1Q00613 529 aa1.94□□□□□ -2.1
HIF1A-212ENST00000557538 LMAN2Q12907 356 aa1.94□□□□□ -2.1
HIF1A-212ENST00000557538 LY6KQ17RY6 165 aa1.94□□□□□ -2.1
HIF1A-212ENST00000557538 CTXN3Q4LDR2 81 aa1.94□□□□□ -2.1
HIF1A-212ENST00000557538 RNASE12Q5GAN4 147 aaKnown RBP1.94□□□□□ -2.1
HIF1A-212ENST00000557538 DEPDC1Q5TB30 811 aa1.94□□□□□ -2.1
HIF1A-212ENST00000557538 GRHL2Q6ISB3 625 aa1.94□□□□□ -2.1
HIF1A-212ENST00000557538 KRTAP5-3Q6L8H2 238 aa1.94□□□□□ -2.1
HIF1A-212ENST00000557538 TRIM72Q6ZMU5 477 aa1.94□□□□□ -2.1
HIF1A-212ENST00000557538 SPRED1Q7Z699 444 aa1.94□□□□□ -2.1
HIF1A-212ENST00000557538 EGFL6Q8IUX8 553 aa1.94□□□□□ -2.1
HIF1A-212ENST00000557538 PAQR4Q8N4S7 273 aaPredicted RBP1.94□□□□□ -2.1
HIF1A-212ENST00000557538 ADAMTS18Q8TE60 1221 aa1.94□□□□□ -2.1
HIF1A-212ENST00000557538 ATP2A3Q93084 1043 aa1.94□□□□□ -2.1
HIF1A-212ENST00000557538 R3HDM4Q96D70 268 aa1.94□□□□□ -2.1
HIF1A-212ENST00000557538 ZSCAN31Q96LW9 406 aaPredicted RBP1.94□□□□□ -2.1
HIF1A-212ENST00000557538 PIGSQ96S52 555 aa1.94□□□□□ -2.1
HIF1A-212ENST00000557538 PCED1AQ9H1Q7 454 aa1.94□□□□□ -2.1
HIF1A-212ENST00000557538 TAOK3Q9H2K8 898 aa1.94□□□□□ -2.1
HIF1A-212ENST00000557538 UBN1Q9NPG3 1134 aa1.94□□□□□ -2.1
HIF1A-212ENST00000557538 MGAT4CQ9UBM8 478 aa1.94□□□□□ -2.1
HIF1A-212ENST00000557538 DTX4Q9Y2E6 619 aa1.94□□□□□ -2.1
HIF1A-212ENST00000557538 TDRD9Q8NDG6 1382 aaKnown RBP1.94□□□□□ -2.1
HIF1A-212ENST00000557538 AOX1Q06278 1338 aa1.94□□□□□ -2.1
HIF1A-212ENST00000557538 CCDC187A0A096LP49 1063 aa1.94□□□□□ -2.1
HIF1A-212ENST00000557538 TMEM247A6NEH6 219 aa1.94□□□□□ -2.1
HIF1A-212ENST00000557538 GAGE10A6NGK3 116 aa1.94□□□□□ -2.1
HIF1A-212ENST00000557538 UNC119BA6NIH7 251 aa1.94□□□□□ -2.1
HIF1A-212ENST00000557538 B9A039 149 aa1.94□□□□□ -2.1
HIF1A-212ENST00000557538 SEPT4O43236 478 aa1.94□□□□□ -2.1
HIF1A-212ENST00000557538 DDX58O95786 925 aaKnown RBP1.94□□□□□ -2.1
HIF1A-212ENST00000557538 ADH4P08319 380 aa1.94□□□□□ -2.1
HIF1A-212ENST00000557538 SRGAP2BP0DMP2 458 aa1.94□□□□□ -2.1
HIF1A-212ENST00000557538 NR2F6P10588 404 aa1.94□□□□□ -2.1
HIF1A-212ENST00000557538 CKMT1AP12532 417 aa1.94□□□□□ -2.1
HIF1A-212ENST00000557538 FBLP22087 321 aaKnown RBP1.94□□□□□ -2.1
HIF1A-212ENST00000557538 PSMA4P25789 261 aaKnown RBP1.94□□□□□ -2.1
HIF1A-212ENST00000557538 RXRGP48443 463 aa1.94□□□□□ -2.1
HIF1A-212ENST00000557538 JAK3P52333 1124 aa1.94□□□□□ -2.1
HIF1A-212ENST00000557538 EIF5P55010 431 aaKnown RBP1.94□□□□□ -2.1
HIF1A-212ENST00000557538 EEFSECP57772 596 aaKnown RBP1.94□□□□□ -2.1
HIF1A-212ENST00000557538 HOXA4Q00056 320 aaPredicted RBP1.94□□□□□ -2.1
HIF1A-212ENST00000557538 TRIM14Q14142 442 aa1.94□□□□□ -2.1
HIF1A-212ENST00000557538 WDR45BQ5MNZ6 344 aa1.94□□□□□ -2.1
HIF1A-212ENST00000557538 MEX3CQ5U5Q3 659 aaKnown RBP1.94□□□□□ -2.1
HIF1A-212ENST00000557538 KAZNQ674X7 775 aa1.94□□□□□ -2.1
HIF1A-212ENST00000557538 BCDIN3DQ7Z5W3 292 aaKnown RBP1.94□□□□□ -2.1
HIF1A-212ENST00000557538 C16orf71Q8IYS4 520 aaPredicted RBP1.94□□□□□ -2.1
HIF1A-212ENST00000557538 ENDOVQ8N8Q3 282 aaKnown RBP1.94□□□□□ -2.1
HIF1A-212ENST00000557538 TEX19Q8NA77 164 aa1.94□□□□□ -2.1
HIF1A-212ENST00000557538 OR52N4Q8NGI2 321 aa1.94□□□□□ -2.1
HIF1A-212ENST00000557538 ZCCHC10Q8TBK6 192 aa1.94□□□□□ -2.1
HIF1A-212ENST00000557538 TMEM171Q8WVE6 324 aa1.94□□□□□ -2.1
HIF1A-212ENST00000557538 NELL1Q92832 810 aa1.94□□□□□ -2.1
HIF1A-212ENST00000557538 ZBTB45Q96K62 511 aaPredicted RBP1.94□□□□□ -2.1
HIF1A-212ENST00000557538 TREX2Q9BQ50 279 aaPredicted RBP1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms