RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 GJA10Q969M2 543 aa4.89□□□□□ -1.63
VRK1-207ENST00000557352 HIPK2Q9H2X6 1198 aa4.89□□□□□ -1.63
VRK1-207ENST00000557352 PAPOLBQ9NRJ5 636 aaKnown RBP4.89□□□□□ -1.63
VRK1-207ENST00000557352 DECR2Q9NUI1 292 aa4.89□□□□□ -1.63
VRK1-207ENST00000557352 PCDHA12Q9UN75 941 aa4.89□□□□□ -1.63
VRK1-207ENST00000557352 A0A1W2PPC1 479 aa4.88□□□□□ -1.63
VRK1-207ENST00000557352 CTIFO43310 598 aaKnown RBP4.88□□□□□ -1.63
VRK1-207ENST00000557352 UGDHO60701 494 aa4.88□□□□□ -1.63
VRK1-207ENST00000557352 PQBP1O60828 265 aaKnown RBP4.88□□□□□ -1.63
VRK1-207ENST00000557352 SLC3A2P08195 630 aaKnown RBP4.88□□□□□ -1.63
VRK1-207ENST00000557352 FGFR2P21802 821 aa4.88□□□□□ -1.63
VRK1-207ENST00000557352 MMP8P22894 467 aa4.88□□□□□ -1.63
VRK1-207ENST00000557352 MST1P26927 711 aa4.88□□□□□ -1.63
VRK1-207ENST00000557352 SLC5A2P31639 672 aa4.88□□□□□ -1.63
VRK1-207ENST00000557352 CDKN2AP42771 156 aaKnown RBP4.88□□□□□ -1.63
VRK1-207ENST00000557352 ALDH7A1P49419 539 aaKnown RBP4.88□□□□□ -1.63
VRK1-207ENST00000557352 SEMA3BQ13214 749 aa4.88□□□□□ -1.63
VRK1-207ENST00000557352 MRNIPQ6NTE8 343 aa4.88□□□□□ -1.63
VRK1-207ENST00000557352 KIAA0408Q6ZU52 694 aa4.88□□□□□ -1.63
VRK1-207ENST00000557352 CCDC28AQ8IWP9 274 aa4.88□□□□□ -1.63
VRK1-207ENST00000557352 RNF152Q8N8N0 203 aa4.88□□□□□ -1.63
VRK1-207ENST00000557352 OR52L2PQ8NGH6 319 aa4.88□□□□□ -1.63
VRK1-207ENST00000557352 MSI2Q96DH6 328 aaKnown RBP4.88□□□□□ -1.63
VRK1-207ENST00000557352 ZNF845Q96IR2 970 aaPredicted RBP4.88□□□□□ -1.63
VRK1-207ENST00000557352 TTLL2Q9BWV7 592 aa4.88□□□□□ -1.63
VRK1-207ENST00000557352 DDX21Q9NR30 783 aaKnown RBP eCLIP4.88□□□□□ -1.63
VRK1-207ENST00000557352 WWOXQ9NZC7 414 aa4.88□□□□□ -1.63
VRK1-207ENST00000557352 SPATA31A5Q5VU36 1347 aa4.88□□□□□ -1.63
VRK1-207ENST00000557352 SPATA31A7Q8IWB4 1347 aa4.88□□□□□ -1.63
VRK1-207ENST00000557352 A0A0G2JK05 382 aa4.87□□□□□ -1.63
VRK1-207ENST00000557352 TMEM272A0A1B0GTI8 110 aa4.87□□□□□ -1.63
VRK1-207ENST00000557352 POM121BA6NF01 834 aa4.87□□□□□ -1.63
VRK1-207ENST00000557352 KPNA5O15131 536 aa4.87□□□□□ -1.63
VRK1-207ENST00000557352 SYF2O95926 243 aaKnown RBP4.87□□□□□ -1.63
VRK1-207ENST00000557352 ATF3P18847 181 aa4.87□□□□□ -1.63
VRK1-207ENST00000557352 AGTR2P50052 363 aa4.87□□□□□ -1.63
VRK1-207ENST00000557352 ELF2Q15723 593 aa4.87□□□□□ -1.63
VRK1-207ENST00000557352 PRTGQ2VWP7 1150 aa4.87□□□□□ -1.63
VRK1-207ENST00000557352 KRTAP5-11Q6L8G4 156 aa4.87□□□□□ -1.63
VRK1-207ENST00000557352 ACSM6Q6P461 480 aa4.87□□□□□ -1.63
VRK1-207ENST00000557352 TLDC1Q6P9B6 456 aa4.87□□□□□ -1.63
VRK1-207ENST00000557352 USP17L6PQ6QN14 398 aa4.87□□□□□ -1.63
VRK1-207ENST00000557352 RFX8Q6ZV50 586 aa4.87□□□□□ -1.63
VRK1-207ENST00000557352 SKAP1Q86WV1 359 aa4.87□□□□□ -1.63
VRK1-207ENST00000557352 OVCA2Q8WZ82 227 aa4.87□□□□□ -1.63
VRK1-207ENST00000557352 MAGEB5Q9BZ81 275 aa4.87□□□□□ -1.63
VRK1-207ENST00000557352 GJB4Q9NTQ9 266 aa4.87□□□□□ -1.63
VRK1-207ENST00000557352 AGO2Q9UKV8 859 aaKnown RBP4.87□□□□□ -1.63
VRK1-207ENST00000557352 OR2W5A6NFC9 320 aa4.86□□□□□ -1.63
VRK1-207ENST00000557352 ZSCAN9O15535 394 aaPredicted RBP4.86□□□□□ -1.63
VRK1-207ENST00000557352 PRPF4O43172 522 aaKnown RBP eCLIP4.86□□□□□ -1.63
VRK1-207ENST00000557352 ATG13O75143 517 aa4.86□□□□□ -1.63
VRK1-207ENST00000557352 ENO1P06733 434 aaKnown RBP4.86□□□□□ -1.63
VRK1-207ENST00000557352 MYL4P12829 197 aa4.86□□□□□ -1.63
VRK1-207ENST00000557352 TSHRP16473 764 aa4.86□□□□□ -1.63
VRK1-207ENST00000557352 STAT6P42226 847 aa4.86□□□□□ -1.63
VRK1-207ENST00000557352 ATP1A4Q13733 1029 aa4.86□□□□□ -1.63
VRK1-207ENST00000557352 INPP5JQ15735 1006 aaPredicted RBP4.86□□□□□ -1.63
VRK1-207ENST00000557352 UBAP2Q5T6F2 1119 aaKnown RBP4.86□□□□□ -1.63
VRK1-207ENST00000557352 RAP1GAP2Q684P5 730 aa4.86□□□□□ -1.63
VRK1-207ENST00000557352 CCDC144NLQ6NUI1 221 aa4.86□□□□□ -1.63
VRK1-207ENST00000557352 ARL14EPQ8N8R7 260 aaPredicted RBP4.86□□□□□ -1.63
VRK1-207ENST00000557352 CCDC150Q8NCX0 1101 aa4.86□□□□□ -1.63
VRK1-207ENST00000557352 KAT2BQ92831 832 aa4.86□□□□□ -1.63
VRK1-207ENST00000557352 TTC17Q96AE7 1141 aa4.86□□□□□ -1.63
VRK1-207ENST00000557352 THOC3Q96J01 351 aaKnown RBP4.86□□□□□ -1.63
VRK1-207ENST00000557352 PIMREGQ9BSJ6 248 aa4.86□□□□□ -1.63
VRK1-207ENST00000557352 CDCP1Q9H5V8 836 aa4.86□□□□□ -1.63
VRK1-207ENST00000557352 THSD1Q9NS62 852 aa4.86□□□□□ -1.63
VRK1-207ENST00000557352 MYO1AQ9UBC5 1043 aa4.86□□□□□ -1.63
VRK1-207ENST00000557352 ZMYND8Q9ULU4 1186 aaPredicted RBP4.86□□□□□ -1.63
VRK1-207ENST00000557352 LOC105371045A0A1W2PR82 267 aa4.85□□□□□ -1.63
VRK1-207ENST00000557352 M0QZQ0 153 aa4.85□□□□□ -1.63
VRK1-207ENST00000557352 GTPBP1O00178 669 aaKnown RBP4.85□□□□□ -1.63
VRK1-207ENST00000557352 ZC3H11AO75152 810 aaKnown RBP eCLIP4.85□□□□□ -1.63
VRK1-207ENST00000557352 ALADP13716 330 aa4.85□□□□□ -1.63
VRK1-207ENST00000557352 GSTM5P46439 218 aa4.85□□□□□ -1.63
VRK1-207ENST00000557352 CASP5P51878 434 aa4.85□□□□□ -1.63
VRK1-207ENST00000557352 DMWDQ09019 674 aa4.85□□□□□ -1.63
VRK1-207ENST00000557352 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.85□□□□□ -1.63
VRK1-207ENST00000557352 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.85□□□□□ -1.63
VRK1-207ENST00000557352 PIK3AP1Q6ZUJ8 805 aa4.85□□□□□ -1.63
VRK1-207ENST00000557352 B4GALNT4Q76KP1 1039 aa4.85□□□□□ -1.63
VRK1-207ENST00000557352 BEND5Q7L4P6 421 aa4.85□□□□□ -1.63
VRK1-207ENST00000557352 DGKHQ86XP1 1220 aa4.85□□□□□ -1.63
VRK1-207ENST00000557352 RHPN2Q8IUC4 686 aa4.85□□□□□ -1.63
VRK1-207ENST00000557352 WDR75Q8IWA0 830 aaKnown RBP4.85□□□□□ -1.63
VRK1-207ENST00000557352 LAS2Q8IYD9 372 aa4.85□□□□□ -1.63
VRK1-207ENST00000557352 CCDC33Q8N5R6 958 aa4.85□□□□□ -1.63
VRK1-207ENST00000557352 B4GALNT2Q8NHY0 566 aa4.85□□□□□ -1.63
VRK1-207ENST00000557352 GLMPQ8WWB7 406 aa4.85□□□□□ -1.63
VRK1-207ENST00000557352 ASB5Q8WWX0 329 aa4.85□□□□□ -1.63
VRK1-207ENST00000557352 ASB12Q8WXK4 309 aa4.85□□□□□ -1.63
VRK1-207ENST00000557352 PCDHAC1Q9H158 963 aa4.85□□□□□ -1.63
VRK1-207ENST00000557352 EMSYQ7Z589 1322 aa4.85□□□□□ -1.63
VRK1-207ENST00000557352 RB1CC1Q8TDY2 1594 aa4.85□□□□□ -1.63
VRK1-207ENST00000557352 UNC13AQ9UPW8 1703 aa4.84□□□□□ -1.63
VRK1-207ENST00000557352 ZNF335Q9H4Z2 1342 aaPredicted RBP4.84□□□□□ -1.63
VRK1-207ENST00000557352 KIR2DS5A0A0G2JLQ3 304 aa4.84□□□□□ -1.63
VRK1-207ENST00000557352 A0A1W2PPC4 97 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms