RNA–Protein interactions for RNA: ENST00000556774.1

RCCD1-207, Transcript of RCC1 domain containing 1, humanhuman

TSL 3

Gene RCCD1, Length 139 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-207ENST00000556774 NUP58Q9BVL2 599 aa16.52■□□□□ 0.24
RCCD1-207ENST00000556774 TOR4AQ9NXH8 423 aa16.52■□□□□ 0.24
RCCD1-207ENST00000556774 STRIP2Q9ULQ0 834 aa16.52■□□□□ 0.24
RCCD1-207ENST00000556774 TRAF3IP3Q9Y228 551 aa16.52■□□□□ 0.24
RCCD1-207ENST00000556774 GOLGA8CPA6NN73 597 aa16.51■□□□□ 0.23
RCCD1-207ENST00000556774 MAPK13O15264 365 aa16.51■□□□□ 0.23
RCCD1-207ENST00000556774 ATXN1LP0C7T5 689 aaKnown RBP16.51■□□□□ 0.23
RCCD1-207ENST00000556774 PFKFB1P16118 471 aa16.51■□□□□ 0.23
RCCD1-207ENST00000556774 CSNK1EP49674 416 aaKnown RBP16.51■□□□□ 0.23
RCCD1-207ENST00000556774 YWHAGP61981 247 aaKnown RBP eCLIP16.51■□□□□ 0.23
RCCD1-207ENST00000556774 ARID5AQ03989 594 aa16.51■□□□□ 0.23
RCCD1-207ENST00000556774 IL27RAQ6UWB1 636 aa16.51■□□□□ 0.23
RCCD1-207ENST00000556774 INTS8Q75QN2 995 aaKnown RBP16.51■□□□□ 0.23
RCCD1-207ENST00000556774 PIGZQ86VD9 579 aa16.51■□□□□ 0.23
RCCD1-207ENST00000556774 MARCH9Q86YJ5 346 aa16.51■□□□□ 0.23
RCCD1-207ENST00000556774 FAM217AQ8IXS0 508 aa16.51■□□□□ 0.23
RCCD1-207ENST00000556774 FAM186BQ8IYM0 893 aa16.51■□□□□ 0.23
RCCD1-207ENST00000556774 ARHGAP18Q8N392 663 aa16.51■□□□□ 0.23
RCCD1-207ENST00000556774 CPXM2Q8N436 756 aa16.51■□□□□ 0.23
RCCD1-207ENST00000556774 ZNF366Q8N895 744 aa16.51■□□□□ 0.23
RCCD1-207ENST00000556774 CCDC150Q8NCX0 1101 aa16.51■□□□□ 0.23
RCCD1-207ENST00000556774 C1orf216Q8TAB5 229 aa16.51■□□□□ 0.23
RCCD1-207ENST00000556774 DNAI2Q9GZS0 605 aa16.51■□□□□ 0.23
RCCD1-207ENST00000556774 LHX5Q9H2C1 402 aa16.51■□□□□ 0.23
RCCD1-207ENST00000556774 C6orf106Q9H6K1 298 aaPredicted RBP16.51■□□□□ 0.23
RCCD1-207ENST00000556774 BTBD3Q9Y2F9 522 aa16.51■□□□□ 0.23
RCCD1-207ENST00000556774 RAXQ9Y2V3 346 aa16.51■□□□□ 0.23
RCCD1-207ENST00000556774 PLXNA2O75051 1894 aa16.5■□□□□ 0.23
RCCD1-207ENST00000556774 FLRT2O43155 660 aa16.5■□□□□ 0.23
RCCD1-207ENST00000556774 TSPAN3O60637 253 aa16.5■□□□□ 0.23
RCCD1-207ENST00000556774 KRT13P13646 458 aa16.5■□□□□ 0.23
RCCD1-207ENST00000556774 HOXD9P28356 352 aaPredicted RBP16.5■□□□□ 0.23
RCCD1-207ENST00000556774 DNM1Q05193 864 aaKnown RBP16.5■□□□□ 0.23
RCCD1-207ENST00000556774 FNDC3BQ53EP0 1204 aaKnown RBP16.5■□□□□ 0.23
RCCD1-207ENST00000556774 RAB41Q5JT25 222 aa16.5■□□□□ 0.23
RCCD1-207ENST00000556774 LAYNQ6UX15 382 aa16.5■□□□□ 0.23
RCCD1-207ENST00000556774 SLC4A11Q8NBS3 891 aa16.5■□□□□ 0.23
RCCD1-207ENST00000556774 OR2T3Q8NH03 318 aa16.5■□□□□ 0.23
RCCD1-207ENST00000556774 RHBDD1Q8TEB9 315 aa16.5■□□□□ 0.23
RCCD1-207ENST00000556774 CYB5D2Q8WUJ1 264 aa16.5■□□□□ 0.23
RCCD1-207ENST00000556774 NDRG1Q92597 394 aaKnown RBP16.5■□□□□ 0.23
RCCD1-207ENST00000556774 SEMA4DQ92854 862 aa16.5■□□□□ 0.23
RCCD1-207ENST00000556774 PLD4Q96BZ4 506 aa16.5■□□□□ 0.23
RCCD1-207ENST00000556774 ARID3AQ99856 593 aa16.5■□□□□ 0.23
RCCD1-207ENST00000556774 SLC2A11Q9BYW1 496 aa16.5■□□□□ 0.23
RCCD1-207ENST00000556774 TMEM8AQ9HCN3 771 aa16.5■□□□□ 0.23
RCCD1-207ENST00000556774 GCN1Q92616 2671 aaKnown RBP16.5■□□□□ 0.23
RCCD1-207ENST00000556774 URB1O60287 2271 aaKnown RBP16.49■□□□□ 0.23
RCCD1-207ENST00000556774 A0A1B0GVL5 298 aa16.49■□□□□ 0.23
RCCD1-207ENST00000556774 CENPBP07199 599 aaPredicted RBP16.49■□□□□ 0.23
RCCD1-207ENST00000556774 PRR29P0C7W0 189 aa16.49■□□□□ 0.23
RCCD1-207ENST00000556774 ACSL1P33121 698 aa16.49■□□□□ 0.23
RCCD1-207ENST00000556774 TKTL1P51854 596 aa16.49■□□□□ 0.23
RCCD1-207ENST00000556774 CAMK2GQ13555 558 aaPredicted RBP16.49■□□□□ 0.23
RCCD1-207ENST00000556774 PKP1Q13835 747 aa16.49■□□□□ 0.23
RCCD1-207ENST00000556774 E2F5Q15329 346 aa16.49■□□□□ 0.23
RCCD1-207ENST00000556774 KIF19Q2TAC6 998 aa16.49■□□□□ 0.23
RCCD1-207ENST00000556774 SOWAHCQ53LP3 525 aaPredicted RBP16.49■□□□□ 0.23
RCCD1-207ENST00000556774 BHLHA9Q7RTU4 235 aa16.49■□□□□ 0.23
RCCD1-207ENST00000556774 TMPRSS7Q7RTY8 843 aa16.49■□□□□ 0.23
RCCD1-207ENST00000556774 HNRNPLLQ8WVV9 542 aaKnown RBP16.49■□□□□ 0.23
RCCD1-207ENST00000556774 CDC6Q99741 560 aa16.49■□□□□ 0.23
RCCD1-207ENST00000556774 ULBP1Q9BZM6 244 aa16.49■□□□□ 0.23
RCCD1-207ENST00000556774 PCED1AQ9H1Q7 454 aa16.49■□□□□ 0.23
RCCD1-207ENST00000556774 CISHQ9NSE2 258 aa16.49■□□□□ 0.23
RCCD1-207ENST00000556774 KIAA1522Q9P206 1035 aaPredicted RBP16.49■□□□□ 0.23
RCCD1-207ENST00000556774 NYNRINQ9P2P1 1898 aaKnown RBP16.49■□□□□ 0.23
RCCD1-207ENST00000556774 MAPK8IP1Q9UQF2 711 aa16.49■□□□□ 0.23
RCCD1-207ENST00000556774 PCDHGB2Q9Y5G2 931 aa16.49■□□□□ 0.23
RCCD1-207ENST00000556774 SNX11Q9Y5W9 270 aa16.49■□□□□ 0.23
RCCD1-207ENST00000556774 TULP2O00295 520 aa16.48■□□□□ 0.23
RCCD1-207ENST00000556774 TIMM44O43615 452 aa16.48■□□□□ 0.23
RCCD1-207ENST00000556774 HLA-FP30511 346 aa16.48■□□□□ 0.23
RCCD1-207ENST00000556774 AFF3P51826 1226 aaKnown RBP16.48■□□□□ 0.23
RCCD1-207ENST00000556774 RAD23BP54727 409 aa16.48■□□□□ 0.23
RCCD1-207ENST00000556774 TRIP4Q15650 581 aaPredicted RBP16.48■□□□□ 0.23
RCCD1-207ENST00000556774 NFIL3Q16649 462 aa16.48■□□□□ 0.23
RCCD1-207ENST00000556774 GOLGA7BQ2TAP0 167 aa16.48■□□□□ 0.23
RCCD1-207ENST00000556774 MPPE1Q53F39 396 aa16.48■□□□□ 0.23
RCCD1-207ENST00000556774 ATL3Q6DD88 541 aa16.48■□□□□ 0.23
RCCD1-207ENST00000556774 CHST9Q7L1S5 443 aa16.48■□□□□ 0.23
RCCD1-207ENST00000556774 FMNL3Q8IVF7 1028 aa16.48■□□□□ 0.23
RCCD1-207ENST00000556774 TMEM176AQ96HP8 235 aa16.48■□□□□ 0.23
RCCD1-207ENST00000556774 TM9SF3Q9HD45 589 aa16.48■□□□□ 0.23
RCCD1-207ENST00000556774 ABCB8Q9NUT2 735 aa16.48■□□□□ 0.23
RCCD1-207ENST00000556774 CFAP45Q9UL16 551 aa16.48■□□□□ 0.23
RCCD1-207ENST00000556774 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.48■□□□□ 0.23
RCCD1-207ENST00000556774 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.48■□□□□ 0.23
RCCD1-207ENST00000556774 DKK1O94907 266 aa16.47■□□□□ 0.23
RCCD1-207ENST00000556774 SEMA4FO95754 770 aa16.47■□□□□ 0.23
RCCD1-207ENST00000556774 ZBED1O96006 694 aa16.47■□□□□ 0.23
RCCD1-207ENST00000556774 MYL1P05976 194 aa16.47■□□□□ 0.23
RCCD1-207ENST00000556774 PSMC2P35998 433 aaKnown RBP16.47■□□□□ 0.23
RCCD1-207ENST00000556774 MXI1P50539 228 aa16.47■□□□□ 0.23
RCCD1-207ENST00000556774 TEAD4Q15561 434 aa16.47■□□□□ 0.23
RCCD1-207ENST00000556774 ARHGAP17Q68EM7 881 aa16.47■□□□□ 0.23
RCCD1-207ENST00000556774 KRT39Q6A163 491 aa16.47■□□□□ 0.23
RCCD1-207ENST00000556774 DBX2Q6ZNG2 339 aa16.47■□□□□ 0.23
RCCD1-207ENST00000556774 ANKRD52Q8NB46 1076 aa16.47■□□□□ 0.23
RCCD1-207ENST00000556774 WFIKKN2Q8TEU8 576 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms