RNA–Protein interactions for RNA: ENST00000556463.5

MARK3-210, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 3,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-210ENST00000556463 TMEM126BQ8IUX1 230 aa8.83□□□□□ -1
MARK3-210ENST00000556463 TTC17Q96AE7 1141 aa8.83□□□□□ -1
MARK3-210ENST00000556463 ZNF778Q96MU6 729 aa8.83□□□□□ -1
MARK3-210ENST00000556463 FERMT1Q9BQL6 677 aa8.83□□□□□ -1
MARK3-210ENST00000556463 C11orf70Q9BRQ4 267 aa8.83□□□□□ -1
MARK3-210ENST00000556463 WWP1Q9H0M0 922 aa8.83□□□□□ -1
MARK3-210ENST00000556463 WDR6Q9NNW5 1121 aaKnown RBP8.83□□□□□ -1
MARK3-210ENST00000556463 EXOC7Q9UPT5 735 aa8.83□□□□□ -1
MARK3-210ENST00000556463 TTLL3Q9Y4R7 772 aa8.83□□□□□ -1
MARK3-210ENST00000556463 NPTX2P47972 431 aa8.82□□□□□ -1
MARK3-210ENST00000556463 WNT7BP56706 349 aa8.82□□□□□ -1
MARK3-210ENST00000556463 PSMC5P62195 406 aa8.82□□□□□ -1
MARK3-210ENST00000556463 NSUN2Q08J23 767 aaKnown RBP eCLIP8.82□□□□□ -1
MARK3-210ENST00000556463 TMTC4Q5T4D3 741 aa8.82□□□□□ -1
MARK3-210ENST00000556463 RHPN2Q8IUC4 686 aa8.82□□□□□ -1
MARK3-210ENST00000556463 SCAIQ8N9R8 606 aa8.82□□□□□ -1
MARK3-210ENST00000556463 GSTCDQ8NEC7 633 aa8.82□□□□□ -1
MARK3-210ENST00000556463 PPP1R14CQ8TAE6 165 aa8.82□□□□□ -1
MARK3-210ENST00000556463 SUN5Q8TC36 379 aa8.82□□□□□ -1
MARK3-210ENST00000556463 PPP4R1Q8TF05 950 aa8.82□□□□□ -1
MARK3-210ENST00000556463 JADE3Q92613 823 aa8.82□□□□□ -1
MARK3-210ENST00000556463 MRPL46Q9H2W6 279 aaKnown RBP8.82□□□□□ -1
MARK3-210ENST00000556463 PARVBQ9HBI1 364 aa8.82□□□□□ -1
MARK3-210ENST00000556463 TRIM39Q9HCM9 518 aa8.82□□□□□ -1
MARK3-210ENST00000556463 ITGA11Q9UKX5 1188 aa8.82□□□□□ -1
MARK3-210ENST00000556463 PCDHGA3Q9Y5H0 932 aa8.82□□□□□ -1
MARK3-210ENST00000556463 UBIAD1Q9Y5Z9 338 aa8.82□□□□□ -1
MARK3-210ENST00000556463 SF3B1O75533 1304 aaKnown RBP eCLIP8.82□□□□□ -19e-6■■■■■ 68.9
MARK3-210ENST00000556463 F8VP50 259 aa8.82□□□□□ -1
MARK3-210ENST00000556463 TAF4O00268 1085 aa8.82□□□□□ -1
MARK3-210ENST00000556463 ZNF195O14628 629 aa8.82□□□□□ -1
MARK3-210ENST00000556463 STBD1O95210 358 aa8.82□□□□□ -1
MARK3-210ENST00000556463 CHEK2O96017 543 aa8.82□□□□□ -1
MARK3-210ENST00000556463 HSPA1LP34931 641 aa8.82□□□□□ -1
MARK3-210ENST00000556463 ALDH18A1P54886 795 aaKnown RBP8.82□□□□□ -1
MARK3-210ENST00000556463 ARPP19P56211 112 aa8.82□□□□□ -1
MARK3-210ENST00000556463 C21orf59P57076 290 aa8.82□□□□□ -1
MARK3-210ENST00000556463 IRX4P78413 519 aa8.82□□□□□ -1
MARK3-210ENST00000556463 MRPL58Q14197 206 aaKnown RBP8.82□□□□□ -1
MARK3-210ENST00000556463 NR1D2Q14995 579 aa8.82□□□□□ -1
MARK3-210ENST00000556463 MAPK11Q15759 364 aa8.82□□□□□ -1
MARK3-210ENST00000556463 EFHC1Q5JVL4 640 aa8.82□□□□□ -1
MARK3-210ENST00000556463 TDRD10Q5VZ19 366 aaKnown RBP8.82□□□□□ -1
MARK3-210ENST00000556463 PRR23BQ6ZRT6 265 aa8.82□□□□□ -1
MARK3-210ENST00000556463 GDPD5Q8WTR4 605 aa8.82□□□□□ -1
MARK3-210ENST00000556463 DACT3Q96B18 629 aaPredicted RBP8.82□□□□□ -1
MARK3-210ENST00000556463 SENP6Q9GZR1 1112 aaPredicted RBP8.82□□□□□ -1
MARK3-210ENST00000556463 NOL6Q9H6R4 1146 aaKnown RBP8.82□□□□□ -1
MARK3-210ENST00000556463 ZNF696Q9H7X3 374 aa8.82□□□□□ -1
MARK3-210ENST00000556463 MARCH7Q9H992 704 aa8.82□□□□□ -1
MARK3-210ENST00000556463 AGO4Q9HCK5 861 aaKnown RBP8.82□□□□□ -1
MARK3-210ENST00000556463 KLHL11Q9NVR0 708 aa8.82□□□□□ -1
MARK3-210ENST00000556463 SATB2Q9UPW6 733 aa8.82□□□□□ -1
MARK3-210ENST00000556463 FADS3Q9Y5Q0 445 aa8.82□□□□□ -1
MARK3-210ENST00000556463 MICAL3Q7RTP6 2002 aa8.82□□□□□ -1
MARK3-210ENST00000556463 C1orf232A0A0U1RR37 186 aa8.82□□□□□ -1
MARK3-210ENST00000556463 CAPN8A6NHC0 703 aa8.82□□□□□ -1
MARK3-210ENST00000556463 H0YIN7 160 aa8.82□□□□□ -1
MARK3-210ENST00000556463 KLHL41O60662 606 aa8.82□□□□□ -1
MARK3-210ENST00000556463 KRT5P13647 590 aa8.82□□□□□ -1
MARK3-210ENST00000556463 PCSK6P29122 969 aa8.82□□□□□ -1
MARK3-210ENST00000556463 YWHABP31946 246 aaKnown RBP8.82□□□□□ -1
MARK3-210ENST00000556463 QARSP47897 775 aaKnown RBP8.82□□□□□ -1
MARK3-210ENST00000556463 CSE1LP55060 971 aaKnown RBP8.82□□□□□ -1
MARK3-210ENST00000556463 ZNF200P98182 395 aaPredicted RBP8.82□□□□□ -1
MARK3-210ENST00000556463 FXNQ16595 210 aa8.82□□□□□ -1
MARK3-210ENST00000556463 GJC2Q5T442 439 aaPredicted RBP8.82□□□□□ -1
MARK3-210ENST00000556463 KRT80Q6KB66 452 aa8.82□□□□□ -1
MARK3-210ENST00000556463 TIFABQ6ZNK6 161 aa8.82□□□□□ -1
MARK3-210ENST00000556463 ARCQ7LC44 396 aa8.82□□□□□ -1
MARK3-210ENST00000556463 TMC7Q7Z402 723 aa8.82□□□□□ -1
MARK3-210ENST00000556463 PRPF39Q86UA1 669 aaKnown RBP8.82□□□□□ -1
MARK3-210ENST00000556463 NT5DC4Q86YG4 428 aa8.82□□□□□ -1
MARK3-210ENST00000556463 TTC30BQ8N4P2 665 aa8.82□□□□□ -1
MARK3-210ENST00000556463 BSNDQ8WZ55 320 aa8.82□□□□□ -1
MARK3-210ENST00000556463 OMA1Q96E52 524 aa8.82□□□□□ -1
MARK3-210ENST00000556463 TRIM56Q9BRZ2 755 aaKnown RBP8.82□□□□□ -1
MARK3-210ENST00000556463 RNF38Q9H0F5 515 aa8.82□□□□□ -1
MARK3-210ENST00000556463 EHD1Q9H4M9 534 aa8.82□□□□□ -1
MARK3-210ENST00000556463 GPRC5CQ9NQ84 441 aa8.82□□□□□ -1
MARK3-210ENST00000556463 KCNH7Q9NS40 1196 aa8.82□□□□□ -1
MARK3-210ENST00000556463 THEGQ9P2T0 379 aa8.82□□□□□ -1
MARK3-210ENST00000556463 C15orf38-AP3S2A0A0A6YYH1 394 aa8.81□□□□□ -1
MARK3-210ENST00000556463 LOC100653049A0A140TA62 436 aa8.81□□□□□ -1
MARK3-210ENST00000556463 CCDC195A0A1B0GUA6 201 aa8.81□□□□□ -1
MARK3-210ENST00000556463 PSMD11O00231 422 aa8.81□□□□□ -1
MARK3-210ENST00000556463 MATN2O00339 956 aa8.81□□□□□ -1
MARK3-210ENST00000556463 KRT34O76011 436 aa8.81□□□□□ -1
MARK3-210ENST00000556463 ENDOD1O94919 500 aa8.81□□□□□ -1
MARK3-210ENST00000556463 KRT1P04264 644 aa8.81□□□□□ -1
MARK3-210ENST00000556463 RPL5P46777 297 aaKnown RBP8.81□□□□□ -1
MARK3-210ENST00000556463 PEX3P56589 373 aa8.81□□□□□ -1
MARK3-210ENST00000556463 PIGHQ14442 188 aaPredicted RBP8.81□□□□□ -1
MARK3-210ENST00000556463 PDK1Q15118 436 aa8.81□□□□□ -1
MARK3-210ENST00000556463 UGCGQ16739 394 aa8.81□□□□□ -1
MARK3-210ENST00000556463 TTC39BQ5VTQ0 682 aaPredicted RBP8.81□□□□□ -1
MARK3-210ENST00000556463 ARPINQ7Z6K5 226 aa8.81□□□□□ -1
MARK3-210ENST00000556463 AMIGO2Q86SJ2 522 aa8.81□□□□□ -1
MARK3-210ENST00000556463 SLC26A11Q86WA9 606 aa8.81□□□□□ -1
MARK3-210ENST00000556463 CLVS1Q8IUQ0 354 aaPredicted RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms