RNA–Protein interactions for RNA: ENST00000556353.1

PRPF39-209, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-209ENST00000556353 ZDHHC17Q8IUH5 632 aa5.88□□□□□ -1.47
PRPF39-209ENST00000556353 CCDC150Q8NCX0 1101 aa5.88□□□□□ -1.47
PRPF39-209ENST00000556353 BCAS4Q8TDM0 211 aa5.88□□□□□ -1.47
PRPF39-209ENST00000556353 IGFBPL1Q8WX77 278 aa5.88□□□□□ -1.47
PRPF39-209ENST00000556353 PIGKQ92643 395 aa5.88□□□□□ -1.47
PRPF39-209ENST00000556353 WDR24Q96S15 920 aa5.88□□□□□ -1.47
PRPF39-209ENST00000556353 KRTAP1-5Q9BYS1 174 aa5.88□□□□□ -1.47
PRPF39-209ENST00000556353 MAGEB5Q9BZ81 275 aa5.88□□□□□ -1.47
PRPF39-209ENST00000556353 TMEM45AQ9NWC5 275 aa5.88□□□□□ -1.47
PRPF39-209ENST00000556353 PCDHB2Q9Y5E7 798 aa5.88□□□□□ -1.47
PRPF39-209ENST00000556353 SIRT4Q9Y6E7 314 aaPredicted RBP5.88□□□□□ -1.47
PRPF39-209ENST00000556353 SQORQ9Y6N5 450 aa5.88□□□□□ -1.47
PRPF39-209ENST00000556353 GOLGA3Q08378 1498 aa5.88□□□□□ -1.47
PRPF39-209ENST00000556353 RICTORQ6R327 1708 aa5.88□□□□□ -1.47
PRPF39-209ENST00000556353 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.87□□□□□ -1.47
PRPF39-209ENST00000556353 POM121BA6NF01 834 aa5.87□□□□□ -1.47
PRPF39-209ENST00000556353 CD8B2A6NJW9 211 aa5.87□□□□□ -1.47
PRPF39-209ENST00000556353 ARP10275 920 aa5.87□□□□□ -1.47
PRPF39-209ENST00000556353 DUSP1P28562 367 aa5.87□□□□□ -1.47
PRPF39-209ENST00000556353 TKTP29401 623 aaKnown RBP5.87□□□□□ -1.47
PRPF39-209ENST00000556353 PIK3CBP42338 1070 aa5.87□□□□□ -1.47
PRPF39-209ENST00000556353 VPS41P49754 854 aa5.87□□□□□ -1.47
PRPF39-209ENST00000556353 SLC12A2P55011 1212 aa5.87□□□□□ -1.47
PRPF39-209ENST00000556353 ZNF543Q08ER8 600 aa5.87□□□□□ -1.47
PRPF39-209ENST00000556353 LEXMQ3ZCV2 418 aa5.87□□□□□ -1.47
PRPF39-209ENST00000556353 KLHDC7AQ5VTJ3 777 aa5.87□□□□□ -1.47
PRPF39-209ENST00000556353 MRNIPQ6NTE8 343 aa5.87□□□□□ -1.47
PRPF39-209ENST00000556353 USP17L6PQ6QN14 398 aa5.87□□□□□ -1.47
PRPF39-209ENST00000556353 COLCA1Q6ZS62 124 aa5.87□□□□□ -1.47
PRPF39-209ENST00000556353 TFAP2DQ7Z6R9 452 aa5.87□□□□□ -1.47
PRPF39-209ENST00000556353 CCDC33Q8N5R6 958 aa5.87□□□□□ -1.47
PRPF39-209ENST00000556353 P2RY11Q96G91 374 aa5.87□□□□□ -1.47
PRPF39-209ENST00000556353 AGO4Q9HCK5 861 aaKnown RBP5.87□□□□□ -1.47
PRPF39-209ENST00000556353 MAGI3Q5TCQ9 1506 aa5.87□□□□□ -1.47
PRPF39-209ENST00000556353 TTC37Q6PGP7 1564 aa5.87□□□□□ -1.47
PRPF39-209ENST00000556353 HECW2Q9P2P5 1572 aa5.86□□□□□ -1.47
PRPF39-209ENST00000556353 ATP10BO94823 1461 aa5.86□□□□□ -1.47
PRPF39-209ENST00000556353 NUP153P49790 1475 aaKnown RBP5.86□□□□□ -1.47
PRPF39-209ENST00000556353 TEX14Q8IWB6 1497 aa5.86□□□□□ -1.47
PRPF39-209ENST00000556353 C16orf96A6NNT2 1141 aa5.86□□□□□ -1.47
PRPF39-209ENST00000556353 KPNA5O15131 536 aa5.86□□□□□ -1.47
PRPF39-209ENST00000556353 CBFA2T3O75081 653 aa5.86□□□□□ -1.47
PRPF39-209ENST00000556353 CRYABP02511 175 aaKnown RBP5.86□□□□□ -1.47
PRPF39-209ENST00000556353 MYL4P12829 197 aa5.86□□□□□ -1.47
PRPF39-209ENST00000556353 FGFR2P21802 821 aa5.86□□□□□ -1.47
PRPF39-209ENST00000556353 MATN1P21941 496 aa5.86□□□□□ -1.47
PRPF39-209ENST00000556353 RPS6KB1P23443 525 aa5.86□□□□□ -1.47
PRPF39-209ENST00000556353 SLC5A2P31639 672 aa5.86□□□□□ -1.47
PRPF39-209ENST00000556353 BFSP2Q13515 415 aa5.86□□□□□ -1.47
PRPF39-209ENST00000556353 RBM44Q6ZP01 1051 aaKnown RBP5.86□□□□□ -1.47
PRPF39-209ENST00000556353 FAM57BQ71RH2 274 aa5.86□□□□□ -1.47
PRPF39-209ENST00000556353 BEND5Q7L4P6 421 aa5.86□□□□□ -1.47
PRPF39-209ENST00000556353 SKAP1Q86WV1 359 aa5.86□□□□□ -1.47
PRPF39-209ENST00000556353 FMNL3Q8IVF7 1028 aa5.86□□□□□ -1.47
PRPF39-209ENST00000556353 UEVLDQ8IX04 471 aa5.86□□□□□ -1.47
PRPF39-209ENST00000556353 WIPF2Q8TF74 440 aaPredicted RBP5.86□□□□□ -1.47
PRPF39-209ENST00000556353 AKAP1Q92667 903 aaKnown RBP eCLIP5.86□□□□□ -1.47
PRPF39-209ENST00000556353 ASNSD1Q9NWL6 643 aa5.86□□□□□ -1.47
PRPF39-209ENST00000556353 KLHL42Q9P2K6 505 aa5.86□□□□□ -1.47
PRPF39-209ENST00000556353 ADAMTSL3P82987 1691 aa5.85□□□□□ -1.47
PRPF39-209ENST00000556353 SLC22A23A1A5C7 686 aa5.85□□□□□ -1.47
PRPF39-209ENST00000556353 KCNQ3O43525 872 aa5.85□□□□□ -1.47
PRPF39-209ENST00000556353 IDEP14735 1019 aa5.85□□□□□ -1.47
PRPF39-209ENST00000556353 MMP8P22894 467 aa5.85□□□□□ -1.47
PRPF39-209ENST00000556353 MST1P26927 711 aa5.85□□□□□ -1.47
PRPF39-209ENST00000556353 HOXA7P31268 230 aaPredicted RBP5.85□□□□□ -1.47
PRPF39-209ENST00000556353 IGHMBP2P38935 993 aaKnown RBP5.85□□□□□ -1.47
PRPF39-209ENST00000556353 KRTAP10-9P60411 292 aa5.85□□□□□ -1.47
PRPF39-209ENST00000556353 B4GALNT1Q00973 533 aa5.85□□□□□ -1.47
PRPF39-209ENST00000556353 MTA1Q13330 715 aa5.85□□□□□ -1.47
PRPF39-209ENST00000556353 TMEM196Q5HYL7 178 aa5.85□□□□□ -1.47
PRPF39-209ENST00000556353 FAM90A2PQ658T7 463 aa5.85□□□□□ -1.47
PRPF39-209ENST00000556353 TLDC1Q6P9B6 456 aa5.85□□□□□ -1.47
PRPF39-209ENST00000556353 CCDC28AQ8IWP9 274 aa5.85□□□□□ -1.47
PRPF39-209ENST00000556353 MMP21Q8N119 569 aa5.85□□□□□ -1.47
PRPF39-209ENST00000556353 SENP7Q9BQF6 1050 aa5.85□□□□□ -1.47
PRPF39-209ENST00000556353 MLXIPLQ9NP71 852 aa5.85□□□□□ -1.47
PRPF39-209ENST00000556353 B4DGG1 531 aa5.84□□□□□ -1.47
PRPF39-209ENST00000556353 ZSCAN9O15535 394 aaPredicted RBP5.84□□□□□ -1.47
PRPF39-209ENST00000556353 ST6GAL1P15907 406 aa5.84□□□□□ -1.47
PRPF39-209ENST00000556353 TSHRP16473 764 aa5.84□□□□□ -1.47
PRPF39-209ENST00000556353 TFEBP19484 476 aa5.84□□□□□ -1.47
PRPF39-209ENST00000556353 HOXD12P35452 270 aa5.84□□□□□ -1.47
PRPF39-209ENST00000556353 CASP5P51878 434 aa5.84□□□□□ -1.47
PRPF39-209ENST00000556353 CLASRPQ8N2M8 674 aaKnown RBP5.84□□□□□ -1.47
PRPF39-209ENST00000556353 OVCA2Q8WZ82 227 aa5.84□□□□□ -1.47
PRPF39-209ENST00000556353 CELF1Q92879 486 aaKnown RBP5.84□□□□□ -1.47
PRPF39-209ENST00000556353 COLEC11Q9BWP8 271 aa5.84□□□□□ -1.47
PRPF39-209ENST00000556353 FAM234AQ9H0X4 552 aa5.84□□□□□ -1.47
PRPF39-209ENST00000556353 SEMA4BQ9NPR2 832 aaPredicted RBP5.84□□□□□ -1.47
PRPF39-209ENST00000556353 RXFP3Q9NSD7 469 aa5.84□□□□□ -1.47
PRPF39-209ENST00000556353 MYO1AQ9UBC5 1043 aa5.84□□□□□ -1.47
PRPF39-209ENST00000556353 ARAP3Q8WWN8 1544 aa5.84□□□□□ -1.48
PRPF39-209ENST00000556353 FHOD3Q2V2M9 1422 aa5.83□□□□□ -1.48
PRPF39-209ENST00000556353 BCORL1Q5H9F3 1711 aa5.83□□□□□ -1.48
PRPF39-209ENST00000556353 IGKV2D-30A0A075B6S6 120 aa5.83□□□□□ -1.48
PRPF39-209ENST00000556353 F8W810 466 aa5.83□□□□□ -1.48
PRPF39-209ENST00000556353 PRYO14603 147 aa5.83□□□□□ -1.48
PRPF39-209ENST00000556353 TOMM40O96008 361 aa5.83□□□□□ -1.48
PRPF39-209ENST00000556353 NDUFS1P28331 727 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms