RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 PTPRDP23468 1912 aa7.35□□□□□ -1.23
ATXN3-236ENST00000556220 ARID2Q68CP9 1835 aa7.34□□□□□ -1.23
ATXN3-236ENST00000556220 A0A1B0GTW7 788 aa7.34□□□□□ -1.23
ATXN3-236ENST00000556220 C2orf78A6NCI8 922 aa7.34□□□□□ -1.23
ATXN3-236ENST00000556220 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.34□□□□□ -1.23
ATXN3-236ENST00000556220 LEFTY2O00292 366 aa7.34□□□□□ -1.23
ATXN3-236ENST00000556220 PLK4O00444 970 aa7.34□□□□□ -1.23
ATXN3-236ENST00000556220 CYB561D2O14569 222 aa7.34□□□□□ -1.23
ATXN3-236ENST00000556220 RRP8O43159 456 aaKnown RBP7.34□□□□□ -1.23
ATXN3-236ENST00000556220 CDKL5O76039 1030 aa7.34□□□□□ -1.23
ATXN3-236ENST00000556220 CYP17A1P05093 508 aa7.34□□□□□ -1.23
ATXN3-236ENST00000556220 ADRB2P07550 413 aa7.34□□□□□ -1.23
ATXN3-236ENST00000556220 KRT2P35908 639 aa7.34□□□□□ -1.23
ATXN3-236ENST00000556220 PPP2R3AQ06190 1150 aa7.34□□□□□ -1.23
ATXN3-236ENST00000556220 STK3Q13188 491 aa7.34□□□□□ -1.23
ATXN3-236ENST00000556220 KCNB1Q14721 858 aa7.34□□□□□ -1.23
ATXN3-236ENST00000556220 KYAT1Q16773 422 aa7.34□□□□□ -1.23
ATXN3-236ENST00000556220 C9orf57Q5W0N0 161 aa7.34□□□□□ -1.23
ATXN3-236ENST00000556220 RHBDF2Q6PJF5 856 aa7.34□□□□□ -1.23
ATXN3-236ENST00000556220 IL27RAQ6UWB1 636 aa7.34□□□□□ -1.23
ATXN3-236ENST00000556220 SEZ6L2Q6UXD5 910 aa7.34□□□□□ -1.23
ATXN3-236ENST00000556220 ZPBP2Q6X784 338 aa7.34□□□□□ -1.23
ATXN3-236ENST00000556220 TRMT11Q7Z4G4 463 aaKnown RBP7.34□□□□□ -1.23
ATXN3-236ENST00000556220 C12orf40Q86WS4 652 aa7.34□□□□□ -1.23
ATXN3-236ENST00000556220 TMPRSS12Q86WS5 348 aa7.34□□□□□ -1.23
ATXN3-236ENST00000556220 TP53INP2Q8IXH6 220 aa7.34□□□□□ -1.23
ATXN3-236ENST00000556220 DAW1Q8N136 415 aa7.34□□□□□ -1.23
ATXN3-236ENST00000556220 FSIP1Q8NA03 581 aa7.34□□□□□ -1.23
ATXN3-236ENST00000556220 STKLD1Q8NE28 680 aa7.34□□□□□ -1.23
ATXN3-236ENST00000556220 DNASE2BQ8WZ79 361 aa7.34□□□□□ -1.23
ATXN3-236ENST00000556220 CCDC74AQ96AQ1 378 aa7.34□□□□□ -1.23
ATXN3-236ENST00000556220 HAPLN2Q9GZV7 340 aa7.34□□□□□ -1.23
ATXN3-236ENST00000556220 GAREM1Q9H706 876 aa7.34□□□□□ -1.23
ATXN3-236ENST00000556220 C17orf75Q9HAS0 396 aa7.34□□□□□ -1.23
ATXN3-236ENST00000556220 ABCB6Q9NP58 842 aa7.34□□□□□ -1.23
ATXN3-236ENST00000556220 ARHGEF4Q9NR80 690 aa7.34□□□□□ -1.23
ATXN3-236ENST00000556220 C1GALT1Q9NS00 363 aa7.34□□□□□ -1.23
ATXN3-236ENST00000556220 TM7SF3Q9NS93 570 aa7.34□□□□□ -1.23
ATXN3-236ENST00000556220 TMLHEQ9NVH6 421 aa7.34□□□□□ -1.23
ATXN3-236ENST00000556220 CYP8B1Q9UNU6 501 aa7.34□□□□□ -1.23
ATXN3-236ENST00000556220 PCDHGB2Q9Y5G2 931 aa7.34□□□□□ -1.23
ATXN3-236ENST00000556220 ATMQ13315 3056 aa7.34□□□□□ -1.23
ATXN3-236ENST00000556220 ADAMTS9Q9P2N4 1935 aa7.34□□□□□ -1.23
ATXN3-236ENST00000556220 PTPRBP23467 1997 aa7.33□□□□□ -1.24
ATXN3-236ENST00000556220 SPTAN1Q13813 2472 aaKnown RBP7.33□□□□□ -1.24
ATXN3-236ENST00000556220 AHCTF1Q8WYP5 2266 aa7.33□□□□□ -1.24
ATXN3-236ENST00000556220 TMEM238LA0A1B0GVL6 79 aa7.33□□□□□ -1.24
ATXN3-236ENST00000556220 A0A1W2PQF6 199 aa7.33□□□□□ -1.24
ATXN3-236ENST00000556220 ANO9A1A5B4 782 aa7.33□□□□□ -1.24
ATXN3-236ENST00000556220 TBC1D3BA6NDS4 549 aa7.33□□□□□ -1.24
ATXN3-236ENST00000556220 EIF1AYO14602 144 aaKnown RBP7.33□□□□□ -1.24
ATXN3-236ENST00000556220 SLC9A3R1O14745 358 aaPredicted RBP7.33□□□□□ -1.24
ATXN3-236ENST00000556220 SLC16A4O15374 487 aa7.33□□□□□ -1.24
ATXN3-236ENST00000556220 FLRT2O43155 660 aa7.33□□□□□ -1.24
ATXN3-236ENST00000556220 TNFSF14O43557 240 aa7.33□□□□□ -1.24
ATXN3-236ENST00000556220 TLX3O43711 291 aaPredicted RBP7.33□□□□□ -1.24
ATXN3-236ENST00000556220 HIP1RO75146 1068 aa7.33□□□□□ -1.24
ATXN3-236ENST00000556220 NDUFS2O75306 463 aa7.33□□□□□ -1.24
ATXN3-236ENST00000556220 CILPO75339 1184 aa7.33□□□□□ -1.24
ATXN3-236ENST00000556220 CER1O95813 267 aa7.33□□□□□ -1.24
ATXN3-236ENST00000556220 PFKLP17858 780 aa7.33□□□□□ -1.24
ATXN3-236ENST00000556220 CYP2F1P24903 491 aa7.33□□□□□ -1.24
ATXN3-236ENST00000556220 TNFSF9P41273 254 aa7.33□□□□□ -1.24
ATXN3-236ENST00000556220 PDE6CP51160 858 aa7.33□□□□□ -1.24
ATXN3-236ENST00000556220 RPL10AP62906 217 aaKnown RBP7.33□□□□□ -1.24
ATXN3-236ENST00000556220 ATP2C1P98194 919 aaPredicted RBP7.33□□□□□ -1.24
ATXN3-236ENST00000556220 SRSF1Q07955 248 aaKnown RBP eCLIP7.33□□□□□ -1.24
ATXN3-236ENST00000556220 STRN3Q13033 797 aa7.33□□□□□ -1.24
ATXN3-236ENST00000556220 RESTQ13127 1097 aa7.33□□□□□ -1.24
ATXN3-236ENST00000556220 SAFBQ15424 915 aaKnown RBP eCLIP7.33□□□□□ -1.24
ATXN3-236ENST00000556220 NFE2Q16621 373 aaPredicted RBP7.33□□□□□ -1.24
ATXN3-236ENST00000556220 HLA-BQ31612 363 aa7.33□□□□□ -1.24
ATXN3-236ENST00000556220 WSCD1Q658N2 575 aa7.33□□□□□ -1.24
ATXN3-236ENST00000556220 OGFOD3Q6PK18 319 aa7.33□□□□□ -1.24
ATXN3-236ENST00000556220 RUFY3Q7L099 469 aa7.33□□□□□ -1.24
ATXN3-236ENST00000556220 ZNF765Q7L2R6 523 aa7.33□□□□□ -1.24
ATXN3-236ENST00000556220 FILIP1Q7Z7B0 1213 aa7.33□□□□□ -1.24
ATXN3-236ENST00000556220 ZNF513Q8N8E2 541 aaPredicted RBP7.33□□□□□ -1.24
ATXN3-236ENST00000556220 AGBL5Q8NDL9 886 aa7.33□□□□□ -1.24
ATXN3-236ENST00000556220 WBP1Q96G27 269 aa7.33□□□□□ -1.24
ATXN3-236ENST00000556220 DRC1Q96MC2 740 aa7.33□□□□□ -1.24
ATXN3-236ENST00000556220 PYM1Q9BRP8 204 aaKnown RBP7.33□□□□□ -1.24
ATXN3-236ENST00000556220 KRTAP9-9Q9BYP9 154 aa7.33□□□□□ -1.24
ATXN3-236ENST00000556220 KRTAP9-4Q9BYQ2 154 aa7.33□□□□□ -1.24
ATXN3-236ENST00000556220 RPF1Q9H9Y2 349 aaKnown RBP7.33□□□□□ -1.24
ATXN3-236ENST00000556220 CD248Q9HCU0 757 aa7.33□□□□□ -1.24
ATXN3-236ENST00000556220 BRMS1Q9HCU9 246 aa7.33□□□□□ -1.24
ATXN3-236ENST00000556220 KCNG1Q9UIX4 513 aa7.33□□□□□ -1.24
ATXN3-236ENST00000556220 NFE2L3Q9Y4A8 694 aa7.33□□□□□ -1.24
ATXN3-236ENST00000556220 TNRC6BQ9UPQ9 1833 aaKnown RBP7.32□□□□□ -1.24
ATXN3-236ENST00000556220 BTBD18B2RXH4 712 aa7.32□□□□□ -1.24
ATXN3-236ENST00000556220 B8ZZF3 427 aa7.32□□□□□ -1.24
ATXN3-236ENST00000556220 HOXB2P14652 356 aa7.32□□□□□ -1.24
ATXN3-236ENST00000556220 NTSR1P30989 418 aa7.32□□□□□ -1.24
ATXN3-236ENST00000556220 MATKP42679 507 aa7.32□□□□□ -1.24
ATXN3-236ENST00000556220 MATR3P43243 847 aaKnown RBP eCLIP7.32□□□□□ -1.24
ATXN3-236ENST00000556220 TAF6P49848 677 aa7.32□□□□□ -1.24
ATXN3-236ENST00000556220 TSPY1Q01534 308 aa7.32□□□□□ -1.24
ATXN3-236ENST00000556220 BNC1Q01954 994 aa7.32□□□□□ -1.24
ATXN3-236ENST00000556220 ENOX2Q16206 610 aaKnown RBP7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms