RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 WBP1Q96G27 269 aa4.24□□□□□ -1.73
SNX6-204ENST00000555541 MEIS3Q99687 375 aa4.24□□□□□ -1.73
SNX6-204ENST00000555541 OGDHLQ9ULD0 1010 aa4.24□□□□□ -1.73
SNX6-204ENST00000555541 SPATA31A5Q5VU36 1347 aa4.23□□□□□ -1.73
SNX6-204ENST00000555541 SPATA31A7Q8IWB4 1347 aa4.23□□□□□ -1.73
SNX6-204ENST00000555541 CLEC18AA5D8T8 446 aa4.23□□□□□ -1.73
SNX6-204ENST00000555541 SERINC4A6NH21 518 aa4.23□□□□□ -1.73
SNX6-204ENST00000555541 PRSS47A8MTI9 375 aa4.23□□□□□ -1.73
SNX6-204ENST00000555541 GOLIM4O00461 696 aa4.23□□□□□ -1.73
SNX6-204ENST00000555541 TPP1O14773 563 aa4.23□□□□□ -1.73
SNX6-204ENST00000555541 PRPF4O43172 522 aaKnown RBP eCLIP4.23□□□□□ -1.73
SNX6-204ENST00000555541 TSPAN6O43657 245 aa4.23□□□□□ -1.73
SNX6-204ENST00000555541 TGFB3P10600 412 aa4.23□□□□□ -1.73
SNX6-204ENST00000555541 TFEBP19484 476 aa4.23□□□□□ -1.73
SNX6-204ENST00000555541 DUSP1P28562 367 aa4.23□□□□□ -1.73
SNX6-204ENST00000555541 KRTAP10-12P60413 245 aa4.23□□□□□ -1.73
SNX6-204ENST00000555541 PGM5Q15124 567 aa4.23□□□□□ -1.73
SNX6-204ENST00000555541 KIAA0753Q2KHM9 967 aa4.23□□□□□ -1.73
SNX6-204ENST00000555541 MZT2AQ6P582 158 aa4.23□□□□□ -1.73
SNX6-204ENST00000555541 DARS2Q6PI48 645 aaKnown RBP4.23□□□□□ -1.73
SNX6-204ENST00000555541 TMEM199Q8N511 208 aa4.23□□□□□ -1.73
SNX6-204ENST00000555541 IQCF1Q8N6M8 205 aa4.23□□□□□ -1.73
SNX6-204ENST00000555541 CLEC18CQ8NCF0 446 aa4.23□□□□□ -1.73
SNX6-204ENST00000555541 SMCR8Q8TEV9 937 aaPredicted RBP4.23□□□□□ -1.73
SNX6-204ENST00000555541 MSLNLQ96KJ4 702 aa4.23□□□□□ -1.73
SNX6-204ENST00000555541 WDR24Q96S15 920 aa4.23□□□□□ -1.73
SNX6-204ENST00000555541 ZNF287Q9HBT7 754 aa4.23□□□□□ -1.73
SNX6-204ENST00000555541 VPS4AQ9UN37 437 aa4.23□□□□□ -1.73
SNX6-204ENST00000555541 A6NNC1 897 aa4.22□□□□□ -1.73
SNX6-204ENST00000555541 USP12O75317 370 aa4.22□□□□□ -1.73
SNX6-204ENST00000555541 INMTO95050 263 aa4.22□□□□□ -1.73
SNX6-204ENST00000555541 MAP4K4O95819 1239 aaPredicted RBP4.22□□□□□ -1.73
SNX6-204ENST00000555541 FAM193AP78312 1265 aa4.22□□□□□ -1.73
SNX6-204ENST00000555541 LTBQ06643 244 aa4.22□□□□□ -1.73
SNX6-204ENST00000555541 GBX1Q14549 363 aa4.22□□□□□ -1.73
SNX6-204ENST00000555541 GRM3Q14832 879 aa4.22□□□□□ -1.73
SNX6-204ENST00000555541 CNGA3Q16281 694 aa4.22□□□□□ -1.73
SNX6-204ENST00000555541 FAM90A2PQ658T7 463 aa4.22□□□□□ -1.73
SNX6-204ENST00000555541 TMPRSS12Q86WS5 348 aa4.22□□□□□ -1.73
SNX6-204ENST00000555541 NUDCD2Q8WVJ2 157 aa4.22□□□□□ -1.73
SNX6-204ENST00000555541 OIT3Q8WWZ8 545 aa4.22□□□□□ -1.73
SNX6-204ENST00000555541 NEUROG1Q92886 237 aa4.22□□□□□ -1.73
SNX6-204ENST00000555541 EME1Q96AY2 570 aa4.22□□□□□ -1.73
SNX6-204ENST00000555541 LMLNQ96KR4 655 aa4.22□□□□□ -1.73
SNX6-204ENST00000555541 RNF26Q9BY78 433 aaPredicted RBP4.22□□□□□ -1.73
SNX6-204ENST00000555541 FZD3Q9NPG1 666 aa4.22□□□□□ -1.73
SNX6-204ENST00000555541 RXFP3Q9NSD7 469 aa4.22□□□□□ -1.73
SNX6-204ENST00000555541 ASNSD1Q9NWL6 643 aa4.22□□□□□ -1.73
SNX6-204ENST00000555541 TCEAL9Q9UHQ7 104 aa4.22□□□□□ -1.73
SNX6-204ENST00000555541 CKAP5Q14008 2032 aa4.22□□□□□ -1.73
SNX6-204ENST00000555541 A0A087WZ62 844 aa4.21□□□□□ -1.74
SNX6-204ENST00000555541 VSTM5A8MXK1 200 aa4.21□□□□□ -1.74
SNX6-204ENST00000555541 TNFRSF13BO14836 293 aaPredicted RBP4.21□□□□□ -1.74
SNX6-204ENST00000555541 MGEA5O60502 916 aa4.21□□□□□ -1.74
SNX6-204ENST00000555541 IL18RAPO95256 599 aa4.21□□□□□ -1.74
SNX6-204ENST00000555541 MT-ND5P03915 603 aa4.21□□□□□ -1.74
SNX6-204ENST00000555541 ARP10275 920 aa4.21□□□□□ -1.74
SNX6-204ENST00000555541 PEX2P28328 305 aa4.21□□□□□ -1.74
SNX6-204ENST00000555541 CARSP49589 748 aaKnown RBP4.21□□□□□ -1.74
SNX6-204ENST00000555541 VPS41P49754 854 aa4.21□□□□□ -1.74
SNX6-204ENST00000555541 KEAP1Q14145 624 aa4.21□□□□□ -1.74
SNX6-204ENST00000555541 CAPRIN2Q6IMN6 1127 aaKnown RBP4.21□□□□□ -1.74
SNX6-204ENST00000555541 KYAT3Q6YP21 454 aaKnown RBP4.21□□□□□ -1.74
SNX6-204ENST00000555541 SPATA2LQ8IUW3 424 aaPredicted RBP4.21□□□□□ -1.74
SNX6-204ENST00000555541 ADGRF4Q8IZF3 695 aa4.21□□□□□ -1.74
SNX6-204ENST00000555541 MYO1HQ8N1T3 1032 aa4.21□□□□□ -1.74
SNX6-204ENST00000555541 FSTL5Q8N475 847 aaPredicted RBP4.21□□□□□ -1.74
SNX6-204ENST00000555541 WFIKKN2Q8TEU8 576 aa4.21□□□□□ -1.74
SNX6-204ENST00000555541 DNASE2BQ8WZ79 361 aa4.21□□□□□ -1.74
SNX6-204ENST00000555541 INPP5DQ92835 1189 aa4.21□□□□□ -1.74
SNX6-204ENST00000555541 ZNF845Q96IR2 970 aaPredicted RBP4.21□□□□□ -1.74
SNX6-204ENST00000555541 SENP7Q9BQF6 1050 aa4.21□□□□□ -1.74
SNX6-204ENST00000555541 NTPCRQ9BSD7 190 aaKnown RBP4.21□□□□□ -1.74
SNX6-204ENST00000555541 ITGB1BP2Q9UKP3 347 aa4.21□□□□□ -1.74
SNX6-204ENST00000555541 PCDHB2Q9Y5E7 798 aa4.21□□□□□ -1.74
SNX6-204ENST00000555541 A0A087WYN8 130 aa4.2□□□□□ -1.74
SNX6-204ENST00000555541 F8W8V4 182 aa4.2□□□□□ -1.74
SNX6-204ENST00000555541 CHRNB1P11230 501 aa4.2□□□□□ -1.74
SNX6-204ENST00000555541 NDUFS1P28331 727 aa4.2□□□□□ -1.74
SNX6-204ENST00000555541 DGKQP52824 942 aa4.2□□□□□ -1.74
SNX6-204ENST00000555541 GALEQ14376 348 aa4.2□□□□□ -1.74
SNX6-204ENST00000555541 C9orf50Q5SZB4 431 aa4.2□□□□□ -1.74
SNX6-204ENST00000555541 CYB5RLQ6IPT4 315 aa4.2□□□□□ -1.74
SNX6-204ENST00000555541 TRILQ7L0X0 811 aa4.2□□□□□ -1.74
SNX6-204ENST00000555541 RHPN2Q8IUC4 686 aa4.2□□□□□ -1.74
SNX6-204ENST00000555541 P3H2Q8IVL5 708 aa4.2□□□□□ -1.74
SNX6-204ENST00000555541 FBXL14Q8N1E6 418 aa4.2□□□□□ -1.74
SNX6-204ENST00000555541 IPCEF1Q8WWN9 437 aaPredicted RBP4.2□□□□□ -1.74
SNX6-204ENST00000555541 AKAP1Q92667 903 aaKnown RBP eCLIP4.2□□□□□ -1.74
SNX6-204ENST00000555541 WDR83Q9BRX9 315 aaKnown RBP4.2□□□□□ -1.74
SNX6-204ENST00000555541 TTLL2Q9BWV7 592 aa4.2□□□□□ -1.74
SNX6-204ENST00000555541 GJB4Q9NTQ9 266 aa4.2□□□□□ -1.74
SNX6-204ENST00000555541 FRMPD2Q68DX3 1309 aaPredicted RBP4.2□□□□□ -1.74
SNX6-204ENST00000555541 LOC105371045A0A1W2PR82 267 aa4.19□□□□□ -1.74
SNX6-204ENST00000555541 GOLGA6CA6NDK9 693 aa4.19□□□□□ -1.74
SNX6-204ENST00000555541 GOLGA6BA6NDN3 693 aa4.19□□□□□ -1.74
SNX6-204ENST00000555541 PODXLO00592 558 aa4.19□□□□□ -1.74
SNX6-204ENST00000555541 ZC3H11AO75152 810 aaKnown RBP eCLIP4.19□□□□□ -1.74
SNX6-204ENST00000555541 GOLGA6DP0CG33 693 aa4.19□□□□□ -1.74
SNX6-204ENST00000555541 FGF3P11487 239 aaPredicted RBP4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms