RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 VRTNQ9H8Y1 702 aa9.83□□□□□ -0.84
SIX4-202ENST00000554079 AKIP1Q9NQ31 210 aa9.83□□□□□ -0.84
SIX4-202ENST00000554079 SIRPGQ9P1W8 387 aa9.83□□□□□ -0.84
SIX4-202ENST00000554079 SLC27A5Q9Y2P5 690 aa9.83□□□□□ -0.84
SIX4-202ENST00000554079 MINDY4BA8MYZ0 360 aa9.82□□□□□ -0.84
SIX4-202ENST00000554079 CLDN25C9JDP6 229 aa9.82□□□□□ -0.84
SIX4-202ENST00000554079 TAF4O00268 1085 aa9.82□□□□□ -0.84
SIX4-202ENST00000554079 AREL1O15033 823 aa9.82□□□□□ -0.84
SIX4-202ENST00000554079 TSPAN9O75954 239 aa9.82□□□□□ -0.84
SIX4-202ENST00000554079 AKAP3O75969 853 aa9.82□□□□□ -0.84
SIX4-202ENST00000554079 BCL10O95999 233 aa9.82□□□□□ -0.84
SIX4-202ENST00000554079 MCF2P10911 925 aa9.82□□□□□ -0.84
SIX4-202ENST00000554079 CCNA2P20248 432 aa9.82□□□□□ -0.84
SIX4-202ENST00000554079 STX1BP61266 288 aa9.82□□□□□ -0.84
SIX4-202ENST00000554079 ECT2LQ008S8 904 aa9.82□□□□□ -0.84
SIX4-202ENST00000554079 PRKCQQ04759 706 aa9.82□□□□□ -0.84
SIX4-202ENST00000554079 DNASE1L3Q13609 305 aa9.82□□□□□ -0.84
SIX4-202ENST00000554079 NRF1Q16656 503 aa9.82□□□□□ -0.84
SIX4-202ENST00000554079 INSCQ1MX18 579 aa9.82□□□□□ -0.84
SIX4-202ENST00000554079 BEND7Q8N7W2 519 aaPredicted RBP9.82□□□□□ -0.84
SIX4-202ENST00000554079 ZNF564Q8TBZ8 553 aaPredicted RBP9.82□□□□□ -0.84
SIX4-202ENST00000554079 TTC9Q92623 222 aa9.82□□□□□ -0.84
SIX4-202ENST00000554079 E2F7Q96AV8 911 aa9.82□□□□□ -0.84
SIX4-202ENST00000554079 ZNF778Q96MU6 729 aa9.82□□□□□ -0.84
SIX4-202ENST00000554079 SEZ6LQ9BYH1 1024 aa9.82□□□□□ -0.84
SIX4-202ENST00000554079 COQ10BQ9H8M1 238 aa9.82□□□□□ -0.84
SIX4-202ENST00000554079 WDR6Q9NNW5 1121 aaKnown RBP9.82□□□□□ -0.84
SIX4-202ENST00000554079 SNTG2Q9NY99 539 aa9.82□□□□□ -0.84
SIX4-202ENST00000554079 ZHX2Q9Y6X8 837 aa9.82□□□□□ -0.84
SIX4-202ENST00000554079 PHLPP1O60346 1717 aa9.82□□□□□ -0.84
SIX4-202ENST00000554079 NHSL1Q5SYE7 1610 aa9.82□□□□□ -0.84
SIX4-202ENST00000554079 FADS2P1A8MWK0 482 aa9.82□□□□□ -0.84
SIX4-202ENST00000554079 RNF103O00237 685 aa9.82□□□□□ -0.84
SIX4-202ENST00000554079 POLR1CO15160 346 aaPredicted RBP9.82□□□□□ -0.84
SIX4-202ENST00000554079 BANF1O75531 89 aa9.82□□□□□ -0.84
SIX4-202ENST00000554079 RNASEH2AO75792 299 aaKnown RBP9.82□□□□□ -0.84
SIX4-202ENST00000554079 PIAS1O75925 651 aa9.82□□□□□ -0.84
SIX4-202ENST00000554079 MT-ND3P03897 115 aa9.82□□□□□ -0.84
SIX4-202ENST00000554079 FGRP09769 529 aa9.82□□□□□ -0.84
SIX4-202ENST00000554079 GLRA2P23416 452 aa9.82□□□□□ -0.84
SIX4-202ENST00000554079 TMPRSS15P98073 1019 aa9.82□□□□□ -0.84
SIX4-202ENST00000554079 CDC20Q12834 499 aa9.82□□□□□ -0.84
SIX4-202ENST00000554079 MAPRE1Q15691 268 aaKnown RBP9.82□□□□□ -0.84
SIX4-202ENST00000554079 SLC35G1Q2M3R5 365 aa9.82□□□□□ -0.84
SIX4-202ENST00000554079 KLHL38Q2WGJ6 581 aa9.82□□□□□ -0.84
SIX4-202ENST00000554079 AGAP9Q5VTM2 703 aa9.82□□□□□ -0.84
SIX4-202ENST00000554079 UGT3A1Q6NUS8 523 aa9.82□□□□□ -0.84
SIX4-202ENST00000554079 C16orf46Q6P387 395 aa9.82□□□□□ -0.84
SIX4-202ENST00000554079 TUBA3EQ6PEY2 450 aa9.82□□□□□ -0.84
SIX4-202ENST00000554079 ADAMTSL2Q86TH1 951 aa9.82□□□□□ -0.84
SIX4-202ENST00000554079 CRLF3Q8IUI8 442 aa9.82□□□□□ -0.84
SIX4-202ENST00000554079 DEPDC4Q8N2C3 294 aa9.82□□□□□ -0.84
SIX4-202ENST00000554079 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.82□□□□□ -0.84
SIX4-202ENST00000554079 ASCC1Q8N9N2 400 aaKnown RBP9.82□□□□□ -0.84
SIX4-202ENST00000554079 GLIS1Q8NBF1 620 aa9.82□□□□□ -0.84
SIX4-202ENST00000554079 ABHD11Q8NFV4 315 aa9.82□□□□□ -0.84
SIX4-202ENST00000554079 CHAC2Q8WUX2 184 aa9.82□□□□□ -0.84
SIX4-202ENST00000554079 RASSF5Q8WWW0 418 aa9.82□□□□□ -0.84
SIX4-202ENST00000554079 RMDN3Q96TC7 470 aa9.82□□□□□ -0.84
SIX4-202ENST00000554079 SLC13A1Q9BZW2 595 aa9.82□□□□□ -0.84
SIX4-202ENST00000554079 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.82□□□□□ -0.84
SIX4-202ENST00000554079 TXNDC16Q9P2K2 825 aa9.82□□□□□ -0.84
SIX4-202ENST00000554079 PACSIN3Q9UKS6 424 aa9.82□□□□□ -0.84
SIX4-202ENST00000554079 MAU2Q9Y6X3 613 aa9.82□□□□□ -0.84
SIX4-202ENST00000554079 KAT6AQ92794 2004 aa9.81□□□□□ -0.84
SIX4-202ENST00000554079 POTEMA6NI47 508 aa9.81□□□□□ -0.84
SIX4-202ENST00000554079 SLC16A3O15427 465 aaKnown RBP9.81□□□□□ -0.84
SIX4-202ENST00000554079 UQCRFS1P1P0C7P4 283 aa9.81□□□□□ -0.84
SIX4-202ENST00000554079 CDH1P12830 882 aa9.81□□□□□ -0.84
SIX4-202ENST00000554079 KRT10P13645 584 aa9.81□□□□□ -0.84
SIX4-202ENST00000554079 XRCC1P18887 633 aaPredicted RBP9.81□□□□□ -0.84
SIX4-202ENST00000554079 IL32P24001 234 aa9.81□□□□□ -0.84
SIX4-202ENST00000554079 PKLRP30613 574 aa9.81□□□□□ -0.84
SIX4-202ENST00000554079 GPD2P43304 727 aa9.81□□□□□ -0.84
SIX4-202ENST00000554079 ORC2Q13416 577 aaPredicted RBP9.81□□□□□ -0.84
SIX4-202ENST00000554079 DLG2Q15700 870 aa9.81□□□□□ -0.84
SIX4-202ENST00000554079 CHI3L2Q15782 390 aa9.81□□□□□ -0.84
SIX4-202ENST00000554079 METTL24Q5JXM2 366 aa9.81□□□□□ -0.84
SIX4-202ENST00000554079 C6orf10Q5SRN2 563 aa9.81□□□□□ -0.84
SIX4-202ENST00000554079 FAM182AQ5T1J6 154 aa9.81□□□□□ -0.84
SIX4-202ENST00000554079 WDR78Q5VTH9 848 aa9.81□□□□□ -0.84
SIX4-202ENST00000554079 KIAA1841Q6NSI8 718 aa9.81□□□□□ -0.84
SIX4-202ENST00000554079 IDO2Q6ZQW0 420 aa9.81□□□□□ -0.84
SIX4-202ENST00000554079 CDHR3Q6ZTQ4 885 aa9.81□□□□□ -0.84
SIX4-202ENST00000554079 OTOP3Q7RTS5 596 aa9.81□□□□□ -0.84
SIX4-202ENST00000554079 KRT25Q7Z3Z0 450 aa9.81□□□□□ -0.84
SIX4-202ENST00000554079 NEK8Q86SG6 692 aa9.81□□□□□ -0.84
SIX4-202ENST00000554079 HERC6Q8IVU3 1022 aa9.81□□□□□ -0.84
SIX4-202ENST00000554079 CCDC28AQ8IWP9 274 aa9.81□□□□□ -0.84
SIX4-202ENST00000554079 SIX6OS1Q8N1H7 587 aa9.81□□□□□ -0.84
SIX4-202ENST00000554079 LINC00469Q8N7U9 141 aa9.81□□□□□ -0.84
SIX4-202ENST00000554079 FAM47BQ8NA70 645 aa9.81□□□□□ -0.84
SIX4-202ENST00000554079 DLG3Q92796 817 aa9.81□□□□□ -0.84
SIX4-202ENST00000554079 MAP6Q96JE9 813 aa9.81□□□□□ -0.84
SIX4-202ENST00000554079 KLHL32Q96NJ5 620 aa9.81□□□□□ -0.84
SIX4-202ENST00000554079 ORAI2Q96SN7 254 aa9.81□□□□□ -0.84
SIX4-202ENST00000554079 WDR83Q9BRX9 315 aaKnown RBP9.81□□□□□ -0.84
SIX4-202ENST00000554079 WDR12Q9GZL7 423 aaKnown RBP9.81□□□□□ -0.84
SIX4-202ENST00000554079 STN1Q9H668 368 aaKnown RBP9.81□□□□□ -0.84
SIX4-202ENST00000554079 KCNQ5Q9NR82 932 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms