RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 SEPT10Q9P0V9 454 aa5.49□□□□□ -1.53
CKAP4-203ENST00000553039 CFAP97Q9P2B7 532 aa5.49□□□□□ -1.53
CKAP4-203ENST00000553039 TUBGCP4Q9UGJ1 667 aa5.49□□□□□ -1.53
CKAP4-203ENST00000553039 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.49□□□□□ -1.53
CKAP4-203ENST00000553039 RAD54BQ9Y620 910 aa5.49□□□□□ -1.53
CKAP4-203ENST00000553039 CPQQ9Y646 472 aa5.49□□□□□ -1.53
CKAP4-203ENST00000553039 STON1Q9Y6Q2 735 aa5.49□□□□□ -1.53
CKAP4-203ENST00000553039 COL12A1Q99715 3063 aa5.48□□□□□ -1.53
CKAP4-203ENST00000553039 NBASA2RRP1 2371 aa5.48□□□□□ -1.53
CKAP4-203ENST00000553039 A0A087X0B3 334 aa5.48□□□□□ -1.53
CKAP4-203ENST00000553039 TTC26A0AVF1 554 aa5.48□□□□□ -1.53
CKAP4-203ENST00000553039 ZNF840PA6NDX5 716 aa5.48□□□□□ -1.53
CKAP4-203ENST00000553039 LACTBL1A8MY62 500 aa5.48□□□□□ -1.53
CKAP4-203ENST00000553039 KCNJ18B7U540 433 aa5.48□□□□□ -1.53
CKAP4-203ENST00000553039 WASH3PC4AMC7 463 aa5.48□□□□□ -1.53
CKAP4-203ENST00000553039 CBX4O00257 560 aa5.48□□□□□ -1.53
CKAP4-203ENST00000553039 PIRO00625 290 aa5.48□□□□□ -1.53
CKAP4-203ENST00000553039 OPA1O60313 960 aa5.48□□□□□ -1.53
CKAP4-203ENST00000553039 MAGEC1O60732 1142 aa5.48□□□□□ -1.53
CKAP4-203ENST00000553039 GADD45BO75293 160 aaPredicted RBP5.48□□□□□ -1.53
CKAP4-203ENST00000553039 FSBPO95073 299 aa5.48□□□□□ -1.53
CKAP4-203ENST00000553039 FAM87AP0C7U9 286 aa5.48□□□□□ -1.53
CKAP4-203ENST00000553039 MBL2P11226 248 aaPredicted RBP5.48□□□□□ -1.53
CKAP4-203ENST00000553039 HARSP12081 509 aaKnown RBP5.48□□□□□ -1.53
CKAP4-203ENST00000553039 IFNAR1P17181 557 aa5.48□□□□□ -1.53
CKAP4-203ENST00000553039 XBP1P17861 261 aa5.48□□□□□ -1.53
CKAP4-203ENST00000553039 PROZP22891 400 aa5.48□□□□□ -1.53
CKAP4-203ENST00000553039 ANXA13P27216 316 aa5.48□□□□□ -1.53
CKAP4-203ENST00000553039 RXRGP48443 463 aa5.48□□□□□ -1.53
CKAP4-203ENST00000553039 CDR1P51861 262 aa5.48□□□□□ -1.53
CKAP4-203ENST00000553039 OXCT1P55809 520 aa5.48□□□□□ -1.53
CKAP4-203ENST00000553039 AMPD3Q01432 767 aa5.48□□□□□ -1.53
CKAP4-203ENST00000553039 NUCB1Q02818 461 aa5.48□□□□□ -1.53
CKAP4-203ENST00000553039 ZBTB16Q05516 673 aa5.48□□□□□ -1.53
CKAP4-203ENST00000553039 SSRP1Q08945 709 aaKnown RBP5.48□□□□□ -1.53
CKAP4-203ENST00000553039 SAFBQ15424 915 aaKnown RBP eCLIP5.48□□□□□ -1.53
CKAP4-203ENST00000553039 FUT11Q495W5 492 aa5.48□□□□□ -1.53
CKAP4-203ENST00000553039 SDHAF4Q5VUM1 108 aa5.48□□□□□ -1.53
CKAP4-203ENST00000553039 TDRD10Q5VZ19 366 aaKnown RBP5.48□□□□□ -1.53
CKAP4-203ENST00000553039 C9orf57Q5W0N0 161 aa5.48□□□□□ -1.53
CKAP4-203ENST00000553039 WSCD1Q658N2 575 aa5.48□□□□□ -1.53
CKAP4-203ENST00000553039 CREB3L3Q68CJ9 461 aa5.48□□□□□ -1.53
CKAP4-203ENST00000553039 C4orf50Q6ZRC1 276 aa5.48□□□□□ -1.53
CKAP4-203ENST00000553039 DENND5BQ6ZUT9 1274 aa5.48□□□□□ -1.53
CKAP4-203ENST00000553039 BTLAQ7Z6A9 289 aa5.48□□□□□ -1.53
CKAP4-203ENST00000553039 FAM124AQ86V42 546 aa5.48□□□□□ -1.53
CKAP4-203ENST00000553039 TMEM25Q86YD3 366 aa5.48□□□□□ -1.53
CKAP4-203ENST00000553039 TICAM1Q8IUC6 712 aa5.48□□□□□ -1.53
CKAP4-203ENST00000553039 SLITRK4Q8IW52 837 aa5.48□□□□□ -1.53
CKAP4-203ENST00000553039 ERMNQ8TAM6 284 aa5.48□□□□□ -1.53
CKAP4-203ENST00000553039 LEO1Q8WVC0 666 aaPredicted RBP5.48□□□□□ -1.53
CKAP4-203ENST00000553039 BSNDQ8WZ55 320 aa5.48□□□□□ -1.53
CKAP4-203ENST00000553039 BIRC7Q96CA5 298 aa5.48□□□□□ -1.53
CKAP4-203ENST00000553039 ERLEC1Q96DZ1 483 aa5.48□□□□□ -1.53
CKAP4-203ENST00000553039 FUBP3Q96I24 572 aaKnown RBP eCLIP5.48□□□□□ -1.53
CKAP4-203ENST00000553039 SPATA17Q96L03 361 aa5.48□□□□□ -1.53
CKAP4-203ENST00000553039 SLITRK1Q96PX8 696 aa5.48□□□□□ -1.53
CKAP4-203ENST00000553039 PYM1Q9BRP8 204 aaKnown RBP5.48□□□□□ -1.53
CKAP4-203ENST00000553039 MKRN2Q9H000 416 aaKnown RBP5.48□□□□□ -1.53
CKAP4-203ENST00000553039 RNF38Q9H0F5 515 aa5.48□□□□□ -1.53
CKAP4-203ENST00000553039 SLC6A17Q9H1V8 727 aa5.48□□□□□ -1.53
CKAP4-203ENST00000553039 C6orf106Q9H6K1 298 aaPredicted RBP5.48□□□□□ -1.53
CKAP4-203ENST00000553039 C17orf75Q9HAS0 396 aa5.48□□□□□ -1.53
CKAP4-203ENST00000553039 ZFYVE1Q9HBF4 777 aa5.48□□□□□ -1.53
CKAP4-203ENST00000553039 SGK2Q9HBY8 427 aa5.48□□□□□ -1.53
CKAP4-203ENST00000553039 ASCL3Q9NQ33 180 aa5.48□□□□□ -1.53
CKAP4-203ENST00000553039 KMT5AQ9NQR1 393 aa5.48□□□□□ -1.53
CKAP4-203ENST00000553039 SMPD4Q9NXE4 827 aa5.48□□□□□ -1.53
CKAP4-203ENST00000553039 DDX56Q9NY93 547 aaKnown RBP5.48□□□□□ -1.53
CKAP4-203ENST00000553039 MAGEC2Q9UBF1 373 aaPredicted RBP5.48□□□□□ -1.53
CKAP4-203ENST00000553039 HCN2Q9UL51 889 aa5.48□□□□□ -1.53
CKAP4-203ENST00000553039 ATXN7L1Q9ULK2 861 aaPredicted RBP5.48□□□□□ -1.53
CKAP4-203ENST00000553039 TPX2Q9ULW0 747 aaKnown RBP5.48□□□□□ -1.53
CKAP4-203ENST00000553039 NCKAP1Q9Y2A7 1128 aa5.48□□□□□ -1.53
CKAP4-203ENST00000553039 PCDHB1Q9Y5F3 818 aa5.48□□□□□ -1.53
CKAP4-203ENST00000553039 PCDHGA8Q9Y5G5 932 aa5.48□□□□□ -1.53
CKAP4-203ENST00000553039 MYO18AQ92614 2054 aaKnown RBP5.47□□□□□ -1.53
CKAP4-203ENST00000553039 FLNCQ14315 2725 aa5.47□□□□□ -1.53
CKAP4-203ENST00000553039 TSC2P49815 1807 aa5.47□□□□□ -1.53
CKAP4-203ENST00000553039 KPNA7A9QM74 516 aa5.47□□□□□ -1.53
CKAP4-203ENST00000553039 TLR4O00206 839 aa5.47□□□□□ -1.53
CKAP4-203ENST00000553039 MEN1O00255 615 aa5.47□□□□□ -1.53
CKAP4-203ENST00000553039 EREGO14944 169 aa5.47□□□□□ -1.53
CKAP4-203ENST00000553039 CYP26A1O43174 497 aa5.47□□□□□ -1.53
CKAP4-203ENST00000553039 EFSO43281 561 aa5.47□□□□□ -1.53
CKAP4-203ENST00000553039 CSO75390 466 aaKnown RBP5.47□□□□□ -1.53
CKAP4-203ENST00000553039 SEMA4FO95754 770 aa5.47□□□□□ -1.53
CKAP4-203ENST00000553039 DDAH2O95865 285 aa5.47□□□□□ -1.53
CKAP4-203ENST00000553039 GP1BAP07359 652 aa5.47□□□□□ -1.53
CKAP4-203ENST00000553039 THEGLP0DJG4 465 aa5.47□□□□□ -1.53
CKAP4-203ENST00000553039 MUTP22033 750 aa5.47□□□□□ -1.53
CKAP4-203ENST00000553039 CD38P28907 300 aa5.47□□□□□ -1.53
CKAP4-203ENST00000553039 TXKP42681 527 aa5.47□□□□□ -1.53
CKAP4-203ENST00000553039 MAGEA11P43364 429 aa5.47□□□□□ -1.53
CKAP4-203ENST00000553039 LHX1P48742 406 aa5.47□□□□□ -1.53
CKAP4-203ENST00000553039 DGKGP49619 791 aa5.47□□□□□ -1.53
CKAP4-203ENST00000553039 GPR15P49685 360 aa5.47□□□□□ -1.53
CKAP4-203ENST00000553039 TAF6P49848 677 aa5.47□□□□□ -1.53
CKAP4-203ENST00000553039 RNF144AP50876 292 aaPredicted RBP5.47□□□□□ -1.53
CKAP4-203ENST00000553039 CDH8P55286 799 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms