RNA–Protein interactions for RNA: ENST00000544268.5

CHFR-223, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 2,412 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-223ENST00000544268 NAT8LQ8N9F0 302 aa15.52■□□□□ 0.07
CHFR-223ENST00000544268 TMEM176AQ96HP8 235 aa15.52■□□□□ 0.07
CHFR-223ENST00000544268 LRRC37BQ96QE4 947 aa15.52■□□□□ 0.07
CHFR-223ENST00000544268 TSEN34Q9BSV6 310 aaKnown RBP15.52■□□□□ 0.07
CHFR-223ENST00000544268 BEGAINQ9BUH8 593 aa15.52■□□□□ 0.07
CHFR-223ENST00000544268 VRTNQ9H8Y1 702 aa15.52■□□□□ 0.07
CHFR-223ENST00000544268 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.52■□□□□ 0.07
CHFR-223ENST00000544268 DDX56Q9NY93 547 aaKnown RBP15.52■□□□□ 0.07
CHFR-223ENST00000544268 NR2E3Q9Y5X4 410 aa15.52■□□□□ 0.07
CHFR-223ENST00000544268 EPHB2P29323 1055 aa15.51■□□□□ 0.07
CHFR-223ENST00000544268 ATICP31939 592 aa15.51■□□□□ 0.07
CHFR-223ENST00000544268 MAGEA10P43363 369 aaPredicted RBP15.51■□□□□ 0.07
CHFR-223ENST00000544268 EIF3EP60228 445 aaKnown RBP15.51■□□□□ 0.07
CHFR-223ENST00000544268 PTK7Q13308 1070 aa15.51■□□□□ 0.07
CHFR-223ENST00000544268 CCDC6Q16204 474 aa15.51■□□□□ 0.07
CHFR-223ENST00000544268 TRIM71Q2Q1W2 868 aaKnown RBP15.51■□□□□ 0.07
CHFR-223ENST00000544268 CENPUQ71F23 418 aa15.51■□□□□ 0.07
CHFR-223ENST00000544268 CCNJLQ8IV13 435 aa15.51■□□□□ 0.07
CHFR-223ENST00000544268 SPATA18Q8TC71 538 aa15.51■□□□□ 0.07
CHFR-223ENST00000544268 SCG3Q8WXD2 468 aaKnown RBP15.51■□□□□ 0.07
CHFR-223ENST00000544268 RSAD2Q8WXG1 361 aa15.51■□□□□ 0.07
CHFR-223ENST00000544268 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.51■□□□□ 0.07
CHFR-223ENST00000544268 TRPV6Q9H1D0 765 aa15.51■□□□□ 0.07
CHFR-223ENST00000544268 OCEL1Q9H607 264 aa15.51■□□□□ 0.07
CHFR-223ENST00000544268 TLE6Q9H808 572 aa15.51■□□□□ 0.07
CHFR-223ENST00000544268 GALNT8Q9NY28 637 aa15.51■□□□□ 0.07
CHFR-223ENST00000544268 NME7Q9Y5B8 376 aa15.51■□□□□ 0.07
CHFR-223ENST00000544268 USH1CQ9Y6N9 552 aa15.51■□□□□ 0.07
CHFR-223ENST00000544268 SMIM28A0A1B0GU29 152 aa15.51■□□□□ 0.07
CHFR-223ENST00000544268 RPLP2P05387 115 aaKnown RBP15.51■□□□□ 0.07
CHFR-223ENST00000544268 T-ENOLP0DO92 83 aa15.51■□□□□ 0.07
CHFR-223ENST00000544268 RBP3P10745 1247 aa15.51■□□□□ 0.07
CHFR-223ENST00000544268 KPNB1Q14974 876 aaKnown RBP15.51■□□□□ 0.07
CHFR-223ENST00000544268 FAM183BPQ6ZVS7 135 aa15.51■□□□□ 0.07
CHFR-223ENST00000544268 BBS12Q6ZW61 710 aa15.51■□□□□ 0.07
CHFR-223ENST00000544268 NETO2Q8NC67 525 aa15.51■□□□□ 0.07
CHFR-223ENST00000544268 PYROXD1Q8WU10 500 aa15.51■□□□□ 0.07
CHFR-223ENST00000544268 CCDC28BQ9BUN5 200 aa15.51■□□□□ 0.07
CHFR-223ENST00000544268 B3GNT5Q9BYG0 378 aa15.51■□□□□ 0.07
CHFR-223ENST00000544268 UNC93B1Q9H1C4 597 aa15.51■□□□□ 0.07
CHFR-223ENST00000544268 FAM49BQ9NUQ9 324 aa15.51■□□□□ 0.07
CHFR-223ENST00000544268 SLC17A7Q9P2U7 560 aa15.51■□□□□ 0.07
CHFR-223ENST00000544268 XPO7Q9UIA9 1087 aaKnown RBP15.51■□□□□ 0.07
CHFR-223ENST00000544268 PHTF1Q9UMS5 762 aa15.51■□□□□ 0.07
CHFR-223ENST00000544268 CHKBQ9Y259 395 aa15.51■□□□□ 0.07
CHFR-223ENST00000544268 MEIS3P2A8K0S8 358 aa15.5■□□□□ 0.07
CHFR-223ENST00000544268 FAM155BO75949 473 aa15.5■□□□□ 0.07
CHFR-223ENST00000544268 TRUB2O95900 331 aaKnown RBP15.5■□□□□ 0.07
CHFR-223ENST00000544268 PFKMP08237 780 aa15.5■□□□□ 0.07
CHFR-223ENST00000544268 ADRA1DP25100 572 aa15.5■□□□□ 0.07
CHFR-223ENST00000544268 CD52P31358 61 aa15.5■□□□□ 0.07
CHFR-223ENST00000544268 PTPN7P35236 360 aa15.5■□□□□ 0.07
CHFR-223ENST00000544268 ATXN1P54253 815 aaKnown RBP15.5■□□□□ 0.07
CHFR-223ENST00000544268 CDH6P55285 790 aa15.5■□□□□ 0.07
CHFR-223ENST00000544268 SFSWAPQ12872 951 aaKnown RBP15.5■□□□□ 0.07
CHFR-223ENST00000544268 GSTA3Q16772 222 aa15.5■□□□□ 0.07
CHFR-223ENST00000544268 CA9Q16790 459 aa15.5■□□□□ 0.07
CHFR-223ENST00000544268 CNPY1Q3B7I2 92 aa15.5■□□□□ 0.07
CHFR-223ENST00000544268 FBXO47Q5MNV8 452 aa15.5■□□□□ 0.07
CHFR-223ENST00000544268 RASIP1Q5U651 963 aa15.5■□□□□ 0.07
CHFR-223ENST00000544268 LHX5Q9H2C1 402 aa15.5■□□□□ 0.07
CHFR-223ENST00000544268 PREBQ9HCU5 417 aa15.5■□□□□ 0.07
CHFR-223ENST00000544268 STARD7Q9NQZ5 370 aa15.5■□□□□ 0.07
CHFR-223ENST00000544268 STRIP2Q9ULQ0 834 aa15.5■□□□□ 0.07
CHFR-223ENST00000544268 SHOC2Q9UQ13 582 aa15.5■□□□□ 0.07
CHFR-223ENST00000544268 PDCD11Q14690 1871 aaKnown RBP15.5■□□□□ 0.07
CHFR-223ENST00000544268 TYROBPO43914 113 aa15.49■□□□□ 0.07
CHFR-223ENST00000544268 DCTN3O75935 186 aa15.49■□□□□ 0.07
CHFR-223ENST00000544268 OVGP1Q12889 678 aa15.49■□□□□ 0.07
CHFR-223ENST00000544268 DBN1Q16643 649 aa15.49■□□□□ 0.07
CHFR-223ENST00000544268 XKR4Q5GH76 650 aa15.49■□□□□ 0.07
CHFR-223ENST00000544268 SPDYAQ5MJ70 313 aa15.49■□□□□ 0.07
CHFR-223ENST00000544268 ZNF618Q5T7W0 954 aa15.49■□□□□ 0.07
CHFR-223ENST00000544268 OR6B2Q6IFH4 312 aa15.49■□□□□ 0.07
CHFR-223ENST00000544268 SCYL2Q6P3W7 929 aa15.49■□□□□ 0.07
CHFR-223ENST00000544268 LVRNQ6Q4G3 990 aa15.49■□□□□ 0.07
CHFR-223ENST00000544268 POLNQ7Z5Q5 900 aa15.49■□□□□ 0.07
CHFR-223ENST00000544268 BEST2Q8NFU1 509 aa15.49■□□□□ 0.07
CHFR-223ENST00000544268 RXFP2Q8WXD0 754 aa15.49■□□□□ 0.07
CHFR-223ENST00000544268 SMC6Q96SB8 1091 aa15.49■□□□□ 0.07
CHFR-223ENST00000544268 PAFAH2Q99487 392 aa15.49■□□□□ 0.07
CHFR-223ENST00000544268 FAM105AQ9NUU6 356 aa15.49■□□□□ 0.07
CHFR-223ENST00000544268 PADI3Q9ULW8 664 aa15.49■□□□□ 0.07
CHFR-223ENST00000544268 STARD13Q9Y3M8 1113 aa15.49■□□□□ 0.07
CHFR-223ENST00000544268 GMEB1Q9Y692 573 aa15.49■□□□□ 0.07
CHFR-223ENST00000544268 F5H423 210 aaPredicted RBP15.49■□□□□ 0.07
CHFR-223ENST00000544268 GPR182O15218 404 aa15.49■□□□□ 0.07
CHFR-223ENST00000544268 SH3BGRP55822 239 aaPredicted RBP15.49■□□□□ 0.07
CHFR-223ENST00000544268 IL9RQ01113 521 aa15.49■□□□□ 0.07
CHFR-223ENST00000544268 LPIN1Q14693 890 aa15.49■□□□□ 0.07
CHFR-223ENST00000544268 KHDC1Q4VXA5 237 aaKnown RBP15.49■□□□□ 0.07
CHFR-223ENST00000544268 PPIL6Q8IXY8 311 aa15.49■□□□□ 0.07
CHFR-223ENST00000544268 AGAP3Q96P47 875 aa15.49■□□□□ 0.07
CHFR-223ENST00000544268 NR1H4Q96RI1 486 aaPredicted RBP15.49■□□□□ 0.07
CHFR-223ENST00000544268 HAPLN3Q96S86 360 aa15.49■□□□□ 0.07
CHFR-223ENST00000544268 SPATA16Q9BXB7 569 aa15.49■□□□□ 0.07
CHFR-223ENST00000544268 TSPAN16Q9UKR8 245 aa15.49■□□□□ 0.07
CHFR-223ENST00000544268 GABBR2O75899 941 aa15.48■□□□□ 0.07
CHFR-223ENST00000544268 KRT7P08729 469 aa15.48■□□□□ 0.07
CHFR-223ENST00000544268 KCNE1P15382 129 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms