RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 TLR10Q9BXR5 811 aa6.26□□□□□ -1.41
XRCC4-206ENST00000542685 YIPF3Q9GZM5 350 aa6.26□□□□□ -1.41
XRCC4-206ENST00000542685 RETREG1Q9H6L5 497 aa6.26□□□□□ -1.41
XRCC4-206ENST00000542685 NOD2Q9HC29 1040 aa6.26□□□□□ -1.41
XRCC4-206ENST00000542685 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.26□□□□□ -1.41
XRCC4-206ENST00000542685 HDAC6Q9UBN7 1215 aa6.26□□□□□ -1.41
XRCC4-206ENST00000542685 TUBGCP4Q9UGJ1 667 aa6.26□□□□□ -1.41
XRCC4-206ENST00000542685 CDYLQ9Y232 598 aa6.26□□□□□ -1.41
XRCC4-206ENST00000542685 CEMIPQ8WUJ3 1361 aa6.26□□□□□ -1.41
XRCC4-206ENST00000542685 POLR2AP24928 1970 aaKnown RBP6.26□□□□□ -1.41
XRCC4-206ENST00000542685 OVOS2A0A0G2JMS6 1433 aa6.25□□□□□ -1.41
XRCC4-206ENST00000542685 IKBKBO14920 756 aa6.25□□□□□ -1.41
XRCC4-206ENST00000542685 N4BP1O75113 896 aaKnown RBP6.25□□□□□ -1.41
XRCC4-206ENST00000542685 ZNF189O75820 626 aaPredicted RBP6.25□□□□□ -1.41
XRCC4-206ENST00000542685 PARP1P09874 1014 aaKnown RBP6.25□□□□□ -1.41
XRCC4-206ENST00000542685 MTHFD1P11586 935 aaKnown RBP6.25□□□□□ -1.41
XRCC4-206ENST00000542685 CPA3P15088 417 aa6.25□□□□□ -1.41
XRCC4-206ENST00000542685 CTCFP49711 727 aaPredicted RBP6.25□□□□□ -1.41
XRCC4-206ENST00000542685 RARRES1P49788 294 aa6.25□□□□□ -1.41
XRCC4-206ENST00000542685 CCT8P50990 548 aa6.25□□□□□ -1.41
XRCC4-206ENST00000542685 HDAC4P56524 1084 aa6.25□□□□□ -1.41
XRCC4-206ENST00000542685 ZNF280AP59817 542 aaPredicted RBP6.25□□□□□ -1.41
XRCC4-206ENST00000542685 GNG11P61952 73 aa6.25□□□□□ -1.41
XRCC4-206ENST00000542685 CKAP4Q07065 602 aaKnown RBP6.25□□□□□ -1.41
XRCC4-206ENST00000542685 IL10RAQ13651 578 aa6.25□□□□□ -1.41
XRCC4-206ENST00000542685 IDI1Q13907 227 aa6.25□□□□□ -1.41
XRCC4-206ENST00000542685 ABCB5Q2M3G0 1257 aa6.25□□□□□ -1.41
XRCC4-206ENST00000542685 LONRF3Q496Y0 759 aa6.25□□□□□ -1.41
XRCC4-206ENST00000542685 CCDC152Q4G0S7 254 aa6.25□□□□□ -1.41
XRCC4-206ENST00000542685 NAA35Q5VZE5 725 aa6.25□□□□□ -1.41
XRCC4-206ENST00000542685 CCDC70Q6NSX1 233 aa6.25□□□□□ -1.41
XRCC4-206ENST00000542685 ARMCX5Q6P1M9 558 aa6.25□□□□□ -1.41
XRCC4-206ENST00000542685 KDM7AQ6ZMT4 941 aa6.25□□□□□ -1.41
XRCC4-206ENST00000542685 ARHGEF25Q86VW2 580 aa6.25□□□□□ -1.41
XRCC4-206ENST00000542685 FAM228AQ86W67 206 aa6.25□□□□□ -1.41
XRCC4-206ENST00000542685 CCDC83Q8IWF9 413 aa6.25□□□□□ -1.41
XRCC4-206ENST00000542685 PEX5LQ8IYB4 626 aa6.25□□□□□ -1.41
XRCC4-206ENST00000542685 LNX2Q8N448 690 aa6.25□□□□□ -1.41
XRCC4-206ENST00000542685 Q8NA96 180 aa6.25□□□□□ -1.41
XRCC4-206ENST00000542685 MIGA1Q8NAN2 632 aa6.25□□□□□ -1.41
XRCC4-206ENST00000542685 IFI44Q8TCB0 444 aa6.25□□□□□ -1.41
XRCC4-206ENST00000542685 TEKT4Q8WW24 435 aa6.25□□□□□ -1.41
XRCC4-206ENST00000542685 DYDC1Q8WWB3 177 aa6.25□□□□□ -1.41
XRCC4-206ENST00000542685 RUFY2Q8WXA3 655 aa6.25□□□□□ -1.41
XRCC4-206ENST00000542685 NELL1Q92832 810 aa6.25□□□□□ -1.41
XRCC4-206ENST00000542685 TMEM125Q96AQ2 219 aa6.25□□□□□ -1.41
XRCC4-206ENST00000542685 SH3GL1Q99961 368 aa6.25□□□□□ -1.41
XRCC4-206ENST00000542685 LRFN3Q9BTN0 628 aa6.25□□□□□ -1.41
XRCC4-206ENST00000542685 SPATA5L1Q9BVQ7 753 aa6.25□□□□□ -1.41
XRCC4-206ENST00000542685 MIS12Q9H081 205 aa6.25□□□□□ -1.41
XRCC4-206ENST00000542685 LSG1Q9H089 658 aaKnown RBP6.25□□□□□ -1.41
XRCC4-206ENST00000542685 FOXJ2Q9P0K8 574 aa6.25□□□□□ -1.41
XRCC4-206ENST00000542685 TRHDEQ9UKU6 1024 aa6.25□□□□□ -1.41
XRCC4-206ENST00000542685 MTMR6Q9Y217 621 aa6.25□□□□□ -1.41
XRCC4-206ENST00000542685 PPP2R2CQ9Y2T4 447 aa6.25□□□□□ -1.41
XRCC4-206ENST00000542685 ATP6V0A2Q9Y487 856 aa6.25□□□□□ -1.41
XRCC4-206ENST00000542685 TNFRSF18Q9Y5U5 241 aa6.25□□□□□ -1.41
XRCC4-206ENST00000542685 ADAMTS7Q9UKP4 1686 aa6.25□□□□□ -1.41
XRCC4-206ENST00000542685 COL11A2P13942 1736 aaPredicted RBP6.25□□□□□ -1.41
XRCC4-206ENST00000542685 ABCC6O95255 1503 aa6.25□□□□□ -1.41
XRCC4-206ENST00000542685 NPHP4O75161 1426 aaPredicted RBP6.25□□□□□ -1.41
XRCC4-206ENST00000542685 NWD1Q149M9 1564 aa6.24□□□□□ -1.41
XRCC4-206ENST00000542685 TMEM110-MUSTN1A8MSY1 372 aa6.24□□□□□ -1.41
XRCC4-206ENST00000542685 HIP1O00291 1037 aa6.24□□□□□ -1.41
XRCC4-206ENST00000542685 TTI1O43156 1089 aa6.24□□□□□ -1.41
XRCC4-206ENST00000542685 PEX1O43933 1283 aa6.24□□□□□ -1.41
XRCC4-206ENST00000542685 PCDHGA12O60330 932 aa6.24□□□□□ -1.41
XRCC4-206ENST00000542685 SKAP2O75563 359 aaPredicted RBP6.24□□□□□ -1.41
XRCC4-206ENST00000542685 HOXB7P09629 217 aa6.24□□□□□ -1.41
XRCC4-206ENST00000542685 KRT9P35527 623 aa6.24□□□□□ -1.41
XRCC4-206ENST00000542685 SERPINB8P50452 374 aa6.24□□□□□ -1.41
XRCC4-206ENST00000542685 RHBDL3P58872 404 aa6.24□□□□□ -1.41
XRCC4-206ENST00000542685 TUBA4AP68366 448 aa6.24□□□□□ -1.41
XRCC4-206ENST00000542685 ITKQ08881 620 aa6.24□□□□□ -1.41
XRCC4-206ENST00000542685 MTX1Q13505 466 aa6.24□□□□□ -1.41
XRCC4-206ENST00000542685 BTG3Q14201 252 aaPredicted RBP6.24□□□□□ -1.41
XRCC4-206ENST00000542685 ANKRD1Q15327 319 aa6.24□□□□□ -1.41
XRCC4-206ENST00000542685 SF3B3Q15393 1217 aaKnown RBP6.24□□□□□ -1.41
XRCC4-206ENST00000542685 CNGA3Q16281 694 aa6.24□□□□□ -1.41
XRCC4-206ENST00000542685 ANKRD20A8PQ5CZ79 823 aa6.24□□□□□ -1.41
XRCC4-206ENST00000542685 SPECC1Q5M775 1068 aa6.24□□□□□ -1.41
XRCC4-206ENST00000542685 AKNAD1Q5T1N1 836 aa6.24□□□□□ -1.41
XRCC4-206ENST00000542685 SYDE2Q5VT97 1194 aa6.24□□□□□ -1.41
XRCC4-206ENST00000542685 PPP4R3AQ6IN85 833 aa6.24□□□□□ -1.41
XRCC4-206ENST00000542685 ZNF365Q70YC5 407 aa6.24□□□□□ -1.41
XRCC4-206ENST00000542685 TMEM110Q86TL2 294 aa6.24□□□□□ -1.41
XRCC4-206ENST00000542685 ANKRD13AQ8IZ07 590 aa6.24□□□□□ -1.41
XRCC4-206ENST00000542685 CNTROBQ8N137 903 aa6.24□□□□□ -1.41
XRCC4-206ENST00000542685 STKLD1Q8NE28 680 aa6.24□□□□□ -1.41
XRCC4-206ENST00000542685 TRPC4APQ8TEL6 797 aa6.24□□□□□ -1.41
XRCC4-206ENST00000542685 ZNF473Q8WTR7 871 aaKnown RBP6.24□□□□□ -1.41
XRCC4-206ENST00000542685 NCSTNQ92542 709 aa6.24□□□□□ -1.41
XRCC4-206ENST00000542685 IQCDQ96DY2 449 aa6.24□□□□□ -1.41
XRCC4-206ENST00000542685 COG3Q96JB2 828 aa6.24□□□□□ -1.41
XRCC4-206ENST00000542685 ZMAT2Q96NC0 199 aaKnown RBP6.24□□□□□ -1.41
XRCC4-206ENST00000542685 CGREF1Q99674 301 aa6.24□□□□□ -1.41
XRCC4-206ENST00000542685 EIF2AQ9BY44 585 aaKnown RBP6.24□□□□□ -1.41
XRCC4-206ENST00000542685 CENPHQ9H3R5 247 aa6.24□□□□□ -1.41
XRCC4-206ENST00000542685 DACT1Q9NYF0 836 aa6.24□□□□□ -1.41
XRCC4-206ENST00000542685 VSX1Q9NZR4 365 aaPredicted RBP6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms