RNA–Protein interactions for RNA: ENST00000542355.6

SCG3-202, Transcript of secretogranin III, humanhuman

TSL 2 BASIC

Gene SCG3, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-202ENST00000542355 GMIPQ9P107 970 aa11.41□□□□□ -0.58
SCG3-202ENST00000542355 ANAPC5Q9UJX4 755 aa11.41□□□□□ -0.58
SCG3-202ENST00000542355 ATP8A1Q9Y2Q0 1164 aa11.41□□□□□ -0.58
SCG3-202ENST00000542355 GOLGA6BA6NDN3 693 aa11.41□□□□□ -0.58
SCG3-202ENST00000542355 H3BRJ5 948 aa11.41□□□□□ -0.58
SCG3-202ENST00000542355 MSI1O43347 362 aaKnown RBP11.41□□□□□ -0.58
SCG3-202ENST00000542355 IGLV3-25P01717 112 aa11.41□□□□□ -0.58
SCG3-202ENST00000542355 ZFXP17010 805 aaPredicted RBP11.41□□□□□ -0.58
SCG3-202ENST00000542355 GLUD2P49448 558 aa11.41□□□□□ -0.58
SCG3-202ENST00000542355 RPL10AP62906 217 aaKnown RBP11.41□□□□□ -0.58
SCG3-202ENST00000542355 DSG1Q02413 1049 aa11.41□□□□□ -0.58
SCG3-202ENST00000542355 FPGSQ05932 587 aa11.41□□□□□ -0.58
SCG3-202ENST00000542355 SLC10A2Q12908 348 aaPredicted RBP11.41□□□□□ -0.58
SCG3-202ENST00000542355 TAF10Q12962 218 aa11.41□□□□□ -0.58
SCG3-202ENST00000542355 FAM182AQ5T1J6 154 aa11.41□□□□□ -0.58
SCG3-202ENST00000542355 TMC3Q7Z5M5 1100 aa11.41□□□□□ -0.58
SCG3-202ENST00000542355 KRT222Q8N1A0 295 aa11.41□□□□□ -0.58
SCG3-202ENST00000542355 CCDC33Q8N5R6 958 aa11.41□□□□□ -0.58
SCG3-202ENST00000542355 FBXO32Q969P5 355 aa11.41□□□□□ -0.58
SCG3-202ENST00000542355 SPATA17Q96L03 361 aa11.41□□□□□ -0.58
SCG3-202ENST00000542355 ZBED2Q9BTP6 218 aa11.41□□□□□ -0.58
SCG3-202ENST00000542355 IL37Q9NZH6 218 aa11.41□□□□□ -0.58
SCG3-202ENST00000542355 RCOR3Q9P2K3 495 aaPredicted RBP11.41□□□□□ -0.58
SCG3-202ENST00000542355 MAGED2Q9UNF1 606 aaPredicted RBP11.41□□□□□ -0.58
SCG3-202ENST00000542355 MFHAS1Q9Y4C4 1052 aa11.41□□□□□ -0.58
SCG3-202ENST00000542355 SNX10Q9Y5X0 201 aa11.41□□□□□ -0.58
SCG3-202ENST00000542355 VWA8A3KMH1 1905 aa11.4□□□□□ -0.58
SCG3-202ENST00000542355 EEF2KO00418 725 aaKnown RBP11.4□□□□□ -0.58
SCG3-202ENST00000542355 RTN3O95197 1032 aaPredicted RBP11.4□□□□□ -0.58
SCG3-202ENST00000542355 GJB5O95377 273 aa11.4□□□□□ -0.58
SCG3-202ENST00000542355 DNAJB2P25686 324 aa11.4□□□□□ -0.58
SCG3-202ENST00000542355 STIP1P31948 543 aaKnown RBP11.4□□□□□ -0.58
SCG3-202ENST00000542355 NRLP54845 237 aa11.4□□□□□ -0.58
SCG3-202ENST00000542355 SCAPQ12770 1279 aa11.4□□□□□ -0.58
SCG3-202ENST00000542355 GPS2Q13227 327 aa11.4□□□□□ -0.58
SCG3-202ENST00000542355 EIF4EBP2Q13542 120 aaPredicted RBP11.4□□□□□ -0.58
SCG3-202ENST00000542355 CFAP58Q5T655 872 aa11.4□□□□□ -0.58
SCG3-202ENST00000542355 IZUMO3Q5VZ72 239 aa11.4□□□□□ -0.58
SCG3-202ENST00000542355 NCBP2-AS2Q69YL0 99 aa11.4□□□□□ -0.58
SCG3-202ENST00000542355 RFX8Q6ZV50 586 aa11.4□□□□□ -0.58
SCG3-202ENST00000542355 DDX53Q86TM3 631 aaKnown RBP11.4□□□□□ -0.58
SCG3-202ENST00000542355 VPS52Q8N1B4 723 aa11.4□□□□□ -0.58
SCG3-202ENST00000542355 ARHGAP18Q8N392 663 aa11.4□□□□□ -0.58
SCG3-202ENST00000542355 BBOF1Q8ND07 529 aa11.4□□□□□ -0.58
SCG3-202ENST00000542355 UBLCP1Q8WVY7 318 aaPredicted RBP11.4□□□□□ -0.58
SCG3-202ENST00000542355 AUTS2Q8WXX7 1259 aa11.4□□□□□ -0.58
SCG3-202ENST00000542355 ARHGEF4Q9NR80 690 aa11.4□□□□□ -0.58
SCG3-202ENST00000542355 CXXC1Q9P0U4 656 aaPredicted RBP11.4□□□□□ -0.58
SCG3-202ENST00000542355 OR12D3Q9UGF7 316 aa11.4□□□□□ -0.58
SCG3-202ENST00000542355 COL4A6Q14031 1691 aa11.4□□□□□ -0.58
SCG3-202ENST00000542355 NLRC5Q86WI3 1866 aa11.4□□□□□ -0.59
SCG3-202ENST00000542355 FAM92AA1XBS5 289 aa11.4□□□□□ -0.59
SCG3-202ENST00000542355 AGPSO00116 658 aa11.4□□□□□ -0.59
SCG3-202ENST00000542355 IRAK2O43187 625 aa11.4□□□□□ -0.59
SCG3-202ENST00000542355 ATF6P18850 670 aa11.4□□□□□ -0.59
SCG3-202ENST00000542355 HSD17B3P37058 310 aa11.4□□□□□ -0.59
SCG3-202ENST00000542355 GGCXP38435 758 aa11.4□□□□□ -0.59
SCG3-202ENST00000542355 NR2C2P49116 596 aa11.4□□□□□ -0.59
SCG3-202ENST00000542355 TUFMP49411 452 aaKnown RBP11.4□□□□□ -0.59
SCG3-202ENST00000542355 CBX1P83916 185 aa11.4□□□□□ -0.59
SCG3-202ENST00000542355 RASIP1Q5U651 963 aa11.4□□□□□ -0.59
SCG3-202ENST00000542355 ALS2CLQ60I27 953 aa11.4□□□□□ -0.59
SCG3-202ENST00000542355 C7orf61Q8IZ16 206 aa11.4□□□□□ -0.59
SCG3-202ENST00000542355 IQCKQ8N0W5 287 aa11.4□□□□□ -0.59
SCG3-202ENST00000542355 TAB3Q8N5C8 712 aaPredicted RBP11.4□□□□□ -0.59
SCG3-202ENST00000542355 NETO2Q8NC67 525 aa11.4□□□□□ -0.59
SCG3-202ENST00000542355 ZNF461Q8TAF7 563 aa11.4□□□□□ -0.59
SCG3-202ENST00000542355 ZIM3Q96PE6 472 aa11.4□□□□□ -0.59
SCG3-202ENST00000542355 ADAM7Q9H2U9 754 aa11.4□□□□□ -0.59
SCG3-202ENST00000542355 SMOC2Q9H3U7 446 aa11.4□□□□□ -0.59
SCG3-202ENST00000542355 PCDH9Q9HC56 1237 aa11.4□□□□□ -0.59
SCG3-202ENST00000542355 AFF4Q9UHB7 1163 aaKnown RBP11.4□□□□□ -0.59
SCG3-202ENST00000542355 PCDHB12Q9Y5F1 795 aa11.4□□□□□ -0.59
SCG3-202ENST00000542355 SLC38A8A6NNN8 435 aa11.39□□□□□ -0.59
SCG3-202ENST00000542355 H3BQF6 201 aa11.39□□□□□ -0.59
SCG3-202ENST00000542355 KCNN4O15554 427 aa11.39□□□□□ -0.59
SCG3-202ENST00000542355 PPFIA2O75334 1257 aa11.39□□□□□ -0.59
SCG3-202ENST00000542355 SEC24AO95486 1093 aa11.39□□□□□ -0.59
SCG3-202ENST00000542355 TBX18O95935 607 aa11.39□□□□□ -0.59
SCG3-202ENST00000542355 URODP06132 367 aa11.39□□□□□ -0.59
SCG3-202ENST00000542355 RARGP13631 454 aa11.39□□□□□ -0.59
SCG3-202ENST00000542355 SYN1P17600 705 aa11.39□□□□□ -0.59
SCG3-202ENST00000542355 RBL1P28749 1068 aa11.39□□□□□ -0.59
SCG3-202ENST00000542355 CCR1P32246 355 aa11.39□□□□□ -0.59
SCG3-202ENST00000542355 RPL22P35268 128 aaKnown RBP11.39□□□□□ -0.59
SCG3-202ENST00000542355 UAP1Q16222 522 aaPredicted RBP11.39□□□□□ -0.59
SCG3-202ENST00000542355 TSNAXIP1Q2TAA8 658 aa11.39□□□□□ -0.59
SCG3-202ENST00000542355 TMEM164Q5U3C3 297 aa11.39□□□□□ -0.59
SCG3-202ENST00000542355 RHBDF2Q6PJF5 856 aa11.39□□□□□ -0.59
SCG3-202ENST00000542355 CCDC25Q86WR0 208 aa11.39□□□□□ -0.59
SCG3-202ENST00000542355 FIBCD1Q8N539 461 aa11.39□□□□□ -0.59
SCG3-202ENST00000542355 PWWP2AQ96N64 755 aa11.39□□□□□ -0.59
SCG3-202ENST00000542355 HERC2P3Q9BVR0 1158 aa11.39□□□□□ -0.59
SCG3-202ENST00000542355 TXLNGYQ9BZA5 131 aa11.39□□□□□ -0.59
SCG3-202ENST00000542355 FAM129AQ9BZQ8 928 aa11.39□□□□□ -0.59
SCG3-202ENST00000542355 SIK2Q9H0K1 926 aa11.39□□□□□ -0.59
SCG3-202ENST00000542355 CYP4F11Q9HBI6 524 aa11.39□□□□□ -0.59
SCG3-202ENST00000542355 USP29Q9HBJ7 922 aa11.39□□□□□ -0.59
SCG3-202ENST00000542355 TLR8Q9NR97 1041 aaKnown RBP11.39□□□□□ -0.59
SCG3-202ENST00000542355 AAASQ9NRG9 546 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms