RNA–Protein interactions for RNA: ENST00000541990.5

THBS3-211, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 2,928 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-211ENST00000541990 ITGAVP06756 1048 aa9.44□□□□□ -0.9
THBS3-211ENST00000541990 CYP2C9P11712 490 aa9.44□□□□□ -0.9
THBS3-211ENST00000541990 UQCRBP14927 111 aa9.44□□□□□ -0.9
THBS3-211ENST00000541990 IL1R2P27930 398 aa9.44□□□□□ -0.9
THBS3-211ENST00000541990 PCSK6P29122 969 aa9.44□□□□□ -0.9
THBS3-211ENST00000541990 FCGRTP55899 365 aa9.44□□□□□ -0.9
THBS3-211ENST00000541990 MBTD1Q05BQ5 628 aa9.44□□□□□ -0.9
THBS3-211ENST00000541990 NOGQ13253 232 aa9.44□□□□□ -0.9
THBS3-211ENST00000541990 MED21Q13503 144 aa9.44□□□□□ -0.9
THBS3-211ENST00000541990 PDK3Q15120 406 aa9.44□□□□□ -0.9
THBS3-211ENST00000541990 TRIP10Q15642 601 aa9.44□□□□□ -0.9
THBS3-211ENST00000541990 CYP4A22Q5TCH4 519 aa9.44□□□□□ -0.9
THBS3-211ENST00000541990 IER5Q5VY09 327 aa9.44□□□□□ -0.9
THBS3-211ENST00000541990 FAM91A1Q658Y4 838 aa9.44□□□□□ -0.9
THBS3-211ENST00000541990 DRICH1Q6PGQ1 229 aaPredicted RBP9.44□□□□□ -0.9
THBS3-211ENST00000541990 UGT2A3Q6UWM9 527 aa9.44□□□□□ -0.9
THBS3-211ENST00000541990 CEP128Q6ZU80 1094 aa9.44□□□□□ -0.9
THBS3-211ENST00000541990 ARPINQ7Z6K5 226 aa9.44□□□□□ -0.9
THBS3-211ENST00000541990 LCA5Q86VQ0 697 aa9.44□□□□□ -0.9
THBS3-211ENST00000541990 RCOR2Q8IZ40 523 aa9.44□□□□□ -0.9
THBS3-211ENST00000541990 FAM71DQ8N9W8 422 aa9.44□□□□□ -0.9
THBS3-211ENST00000541990 CFAP36Q96G28 342 aa9.44□□□□□ -0.9
THBS3-211ENST00000541990 ZNF778Q96MU6 729 aa9.44□□□□□ -0.9
THBS3-211ENST00000541990 RILPQ96NA2 401 aa9.44□□□□□ -0.9
THBS3-211ENST00000541990 OLFM3Q96PB7 478 aa9.44□□□□□ -0.9
THBS3-211ENST00000541990 GCNAQ96QF7 691 aa9.44□□□□□ -0.9
THBS3-211ENST00000541990 USP29Q9HBJ7 922 aa9.44□□□□□ -0.9
THBS3-211ENST00000541990 SMYD2Q9NRG4 433 aa9.44□□□□□ -0.9
THBS3-211ENST00000541990 PCDHB4Q9Y5E5 795 aa9.44□□□□□ -0.9
THBS3-211ENST00000541990 HEMK1Q9Y5R4 338 aaPredicted RBP9.44□□□□□ -0.9
THBS3-211ENST00000541990 PLXNA1Q9UIW2 1896 aa9.43□□□□□ -0.9
THBS3-211ENST00000541990 IGKV6-21A0A0C4DH24 114 aa9.43□□□□□ -0.9
THBS3-211ENST00000541990 CAPN8A6NHC0 703 aa9.43□□□□□ -0.9
THBS3-211ENST00000541990 COPEO14579 308 aa9.43□□□□□ -0.9
THBS3-211ENST00000541990 VNN1O95497 513 aa9.43□□□□□ -0.9
THBS3-211ENST00000541990 PENKP01210 267 aaPredicted RBP9.43□□□□□ -0.9
THBS3-211ENST00000541990 HLA-DRAP01903 254 aa9.43□□□□□ -0.9
THBS3-211ENST00000541990 C1QAP02745 245 aa9.43□□□□□ -0.9
THBS3-211ENST00000541990 AFF1P51825 1210 aaKnown RBP9.43□□□□□ -0.9
THBS3-211ENST00000541990 BTKQ06187 659 aa9.43□□□□□ -0.9
THBS3-211ENST00000541990 GRM2Q14416 872 aa9.43□□□□□ -0.9
THBS3-211ENST00000541990 TAF5Q15542 800 aa9.43□□□□□ -0.9
THBS3-211ENST00000541990 SMAD1Q15797 465 aaKnown RBP9.43□□□□□ -0.9
THBS3-211ENST00000541990 BRDTQ58F21 947 aaPredicted RBP9.43□□□□□ -0.9
THBS3-211ENST00000541990 EFHC1Q5JVL4 640 aa9.43□□□□□ -0.9
THBS3-211ENST00000541990 FAXCQ5TGI0 409 aa9.43□□□□□ -0.9
THBS3-211ENST00000541990 ATF7IP2Q5U623 682 aa9.43□□□□□ -0.9
THBS3-211ENST00000541990 DUS1LQ6P1R4 473 aaKnown RBP9.43□□□□□ -0.9
THBS3-211ENST00000541990 CTAGE3PQ8IX95 158 aa9.43□□□□□ -0.9
THBS3-211ENST00000541990 PPM1NQ8N819 430 aa9.43□□□□□ -0.9
THBS3-211ENST00000541990 SLC44A1Q8WWI5 657 aa9.43□□□□□ -0.9
THBS3-211ENST00000541990 MFSD14AQ96MC6 490 aa9.43□□□□□ -0.9
THBS3-211ENST00000541990 ACO2Q99798 780 aaKnown RBP9.43□□□□□ -0.9
THBS3-211ENST00000541990 AP5M1Q9H0R1 490 aa9.43□□□□□ -0.9
THBS3-211ENST00000541990 RNF39Q9H2S5 420 aa9.43□□□□□ -0.9
THBS3-211ENST00000541990 PLAC1Q9HBJ0 212 aa9.43□□□□□ -0.9
THBS3-211ENST00000541990 KCNK4Q9NYG8 393 aa9.43□□□□□ -0.9
THBS3-211ENST00000541990 UBAP1Q9NZ09 502 aa9.43□□□□□ -0.9
THBS3-211ENST00000541990 TMCO1Q9UM00 188 aa9.43□□□□□ -0.9
THBS3-211ENST00000541990 EXOC7Q9UPT5 735 aa9.43□□□□□ -0.9
THBS3-211ENST00000541990 HBS1LQ9Y450 684 aaKnown RBP9.43□□□□□ -0.9
THBS3-211ENST00000541990 RBM47A0AV96 593 aaKnown RBP9.43□□□□□ -0.9
THBS3-211ENST00000541990 TMEM191CA6NGB0 347 aa9.43□□□□□ -0.9
THBS3-211ENST00000541990 C3orf70A6NLC5 250 aaPredicted RBP9.43□□□□□ -0.9
THBS3-211ENST00000541990 E7ESA3 106 aa9.43□□□□□ -0.9
THBS3-211ENST00000541990 ITM2AO43736 263 aa9.43□□□□□ -0.9
THBS3-211ENST00000541990 CST8O60676 142 aa9.43□□□□□ -0.9
THBS3-211ENST00000541990 TFAP2AP05549 437 aa9.43□□□□□ -0.9
THBS3-211ENST00000541990 INHBAP08476 426 aa9.43□□□□□ -0.9
THBS3-211ENST00000541990 TMEM191BP0C7N4 346 aa9.43□□□□□ -0.9
THBS3-211ENST00000541990 GMPRP36959 345 aa9.43□□□□□ -0.9
THBS3-211ENST00000541990 RAP1GAPP47736 663 aa9.43□□□□□ -0.9
THBS3-211ENST00000541990 TBL3Q12788 808 aaKnown RBP9.43□□□□□ -0.9
THBS3-211ENST00000541990 TLR1Q15399 786 aa9.43□□□□□ -0.9
THBS3-211ENST00000541990 MMEL1Q495T6 779 aa9.43□□□□□ -0.9
THBS3-211ENST00000541990 TFDP3Q5H9I0 405 aa9.43□□□□□ -0.9
THBS3-211ENST00000541990 C6orf163Q5TEZ5 329 aa9.43□□□□□ -0.9
THBS3-211ENST00000541990 NPNTQ6UXI9 565 aa9.43□□□□□ -0.9
THBS3-211ENST00000541990 DPH6Q7L8W6 267 aa9.43□□□□□ -0.9
THBS3-211ENST00000541990 RSPH3Q86UC2 560 aa9.43□□□□□ -0.9
THBS3-211ENST00000541990 HPS6Q86YV9 775 aa9.43□□□□□ -0.9
THBS3-211ENST00000541990 ZNF296Q8WUU4 475 aaPredicted RBP9.43□□□□□ -0.9
THBS3-211ENST00000541990 SNRNP27Q8WVK2 155 aaKnown RBP9.43□□□□□ -0.9
THBS3-211ENST00000541990 ALKBH8Q96BT7 664 aaKnown RBP9.43□□□□□ -0.9
THBS3-211ENST00000541990 TRIM11Q96F44 468 aa9.43□□□□□ -0.9
THBS3-211ENST00000541990 GRIP2Q9C0E4 1043 aa9.43□□□□□ -0.9
THBS3-211ENST00000541990 TRMT13Q9NUP7 481 aaKnown RBP9.43□□□□□ -0.9
THBS3-211ENST00000541990 DRG1Q9Y295 367 aaKnown RBP9.43□□□□□ -0.9
THBS3-211ENST00000541990 A0A0B4J269 797 aa9.42□□□□□ -0.9
THBS3-211ENST00000541990 A0A0J9YVX5 310 aa9.42□□□□□ -0.9
THBS3-211ENST00000541990 CCDC160A6NGH7 325 aa9.42□□□□□ -0.9
THBS3-211ENST00000541990 ATP6V1G1O75348 118 aa9.42□□□□□ -0.9
THBS3-211ENST00000541990 NFICP08651 508 aa9.42□□□□□ -0.9
THBS3-211ENST00000541990 WEE2P0C1S8 567 aa9.42□□□□□ -0.9
THBS3-211ENST00000541990 ATP6V1B1P15313 513 aa9.42□□□□□ -0.9
THBS3-211ENST00000541990 RAG1P15918 1043 aa9.42□□□□□ -0.9
THBS3-211ENST00000541990 MAGEA10P43363 369 aaPredicted RBP9.42□□□□□ -0.9
THBS3-211ENST00000541990 APLP1P51693 650 aa9.42□□□□□ -0.9
THBS3-211ENST00000541990 CDH8P55286 799 aa9.42□□□□□ -0.9
THBS3-211ENST00000541990 KCNA10Q16322 511 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms