RNA–Protein interactions for RNA: ENST00000541888.2

AC005840.3-201, humanhuman

TSL 5 BASIC

Gene AC005840.3, Length 1,803 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.3-201ENST00000541888 TCEAL1Q15170 157 aa8.06□□□□□ -1.12
AC005840.3-201ENST00000541888 PSMD5Q16401 504 aa8.06□□□□□ -1.12
AC005840.3-201ENST00000541888 WHAMMP3Q1A5X7 153 aa8.06□□□□□ -1.12
AC005840.3-201ENST00000541888 ZNF280DQ6N043 979 aa8.06□□□□□ -1.12
AC005840.3-201ENST00000541888 MFSD7Q6UXD7 560 aa8.06□□□□□ -1.12
AC005840.3-201ENST00000541888 VPS52Q8N1B4 723 aa8.06□□□□□ -1.12
AC005840.3-201ENST00000541888 UBL4BQ8N7F7 174 aa8.06□□□□□ -1.12
AC005840.3-201ENST00000541888 KLHL23Q8NBE8 558 aa8.06□□□□□ -1.12
AC005840.3-201ENST00000541888 GALNT6Q8NCL4 622 aa8.06□□□□□ -1.12
AC005840.3-201ENST00000541888 MSANTD4Q8NCY6 345 aa8.06□□□□□ -1.12
AC005840.3-201ENST00000541888 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.06□□□□□ -1.12
AC005840.3-201ENST00000541888 C1orf54Q8WWF1 131 aa8.06□□□□□ -1.12
AC005840.3-201ENST00000541888 TMEM169Q96HH4 297 aa8.06□□□□□ -1.12
AC005840.3-201ENST00000541888 GDAP1L1Q96MZ0 367 aa8.06□□□□□ -1.12
AC005840.3-201ENST00000541888 ZNF558Q96NG5 402 aa8.06□□□□□ -1.12
AC005840.3-201ENST00000541888 C17orf80Q9BSJ5 609 aa8.06□□□□□ -1.12
AC005840.3-201ENST00000541888 ACBD3Q9H3P7 528 aa8.06□□□□□ -1.12
AC005840.3-201ENST00000541888 ANKZF1Q9H8Y5 726 aa8.06□□□□□ -1.12
AC005840.3-201ENST00000541888 NMUR1Q9HB89 426 aa8.06□□□□□ -1.12
AC005840.3-201ENST00000541888 DMAP1Q9NPF5 467 aaPredicted RBP8.06□□□□□ -1.12
AC005840.3-201ENST00000541888 ANLNQ9NQW6 1124 aa8.06□□□□□ -1.12
AC005840.3-201ENST00000541888 OSER1Q9NX31 292 aa8.06□□□□□ -1.12
AC005840.3-201ENST00000541888 DSEQ9UL01 958 aa8.06□□□□□ -1.12
AC005840.3-201ENST00000541888 MFHAS1Q9Y4C4 1052 aa8.06□□□□□ -1.12
AC005840.3-201ENST00000541888 SNX10Q9Y5X0 201 aa8.06□□□□□ -1.12
AC005840.3-201ENST00000541888 I6L893 689 aaPredicted RBP8.05□□□□□ -1.12
AC005840.3-201ENST00000541888 PGRMC1O00264 195 aaKnown RBP8.05□□□□□ -1.12
AC005840.3-201ENST00000541888 KRIT1O00522 736 aa8.05□□□□□ -1.12
AC005840.3-201ENST00000541888 SCAMP3O14828 347 aaKnown RBP8.05□□□□□ -1.12
AC005840.3-201ENST00000541888 KHNYNO15037 678 aaKnown RBP8.05□□□□□ -1.12
AC005840.3-201ENST00000541888 SASH3O75995 380 aa8.05□□□□□ -1.12
AC005840.3-201ENST00000541888 ZBED1O96006 694 aa8.05□□□□□ -1.12
AC005840.3-201ENST00000541888 ATP2A2P16615 1042 aaKnown RBP8.05□□□□□ -1.12
AC005840.3-201ENST00000541888 ATF6P18850 670 aa8.05□□□□□ -1.12
AC005840.3-201ENST00000541888 DNAJB1P25685 340 aa8.05□□□□□ -1.12
AC005840.3-201ENST00000541888 SDC4P31431 198 aa8.05□□□□□ -1.12
AC005840.3-201ENST00000541888 SULT1E1P49888 294 aa8.05□□□□□ -1.12
AC005840.3-201ENST00000541888 ZNF143P52747 638 aaPredicted RBP8.05□□□□□ -1.12
AC005840.3-201ENST00000541888 NRLP54845 237 aa8.05□□□□□ -1.12
AC005840.3-201ENST00000541888 RWDD2BP57060 319 aa8.05□□□□□ -1.12
AC005840.3-201ENST00000541888 SLC8A3P57103 927 aa8.05□□□□□ -1.12
AC005840.3-201ENST00000541888 DAOAP59103 153 aa8.05□□□□□ -1.12
AC005840.3-201ENST00000541888 PSMA6P60900 246 aaKnown RBP8.05□□□□□ -1.12
AC005840.3-201ENST00000541888 PPIGQ13427 754 aaKnown RBP eCLIP8.05□□□□□ -1.12
AC005840.3-201ENST00000541888 MRPL58Q14197 206 aaKnown RBP8.05□□□□□ -1.12
AC005840.3-201ENST00000541888 CFAP221Q4G0U5 840 aa8.05□□□□□ -1.12
AC005840.3-201ENST00000541888 CRTC2Q53ET0 693 aaPredicted RBP8.05□□□□□ -1.12
AC005840.3-201ENST00000541888 PPP6R3Q5H9R7 873 aaPredicted RBP8.05□□□□□ -1.12
AC005840.3-201ENST00000541888 SLC39A11Q8N1S5 342 aa8.05□□□□□ -1.12
AC005840.3-201ENST00000541888 TMEM151AQ8N4L1 468 aa8.05□□□□□ -1.12
AC005840.3-201ENST00000541888 TTC16Q8NEE8 873 aa8.05□□□□□ -1.12
AC005840.3-201ENST00000541888 SLC7A14Q8TBB6 771 aa8.05□□□□□ -1.12
AC005840.3-201ENST00000541888 ABHD8Q96I13 439 aa8.05□□□□□ -1.12
AC005840.3-201ENST00000541888 CLSTN3Q9BQT9 956 aa8.05□□□□□ -1.12
AC005840.3-201ENST00000541888 CSNK1G1Q9HCP0 422 aa8.05□□□□□ -1.12
AC005840.3-201ENST00000541888 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.05□□□□□ -1.12
AC005840.3-201ENST00000541888 SFMBT1Q9UHJ3 866 aa8.05□□□□□ -1.12
AC005840.3-201ENST00000541888 AMACRQ9UHK6 382 aa8.05□□□□□ -1.12
AC005840.3-201ENST00000541888 DMGDHQ9UI17 866 aaKnown RBP8.05□□□□□ -1.12
AC005840.3-201ENST00000541888 GDF2Q9UK05 429 aaPredicted RBP8.05□□□□□ -1.12
AC005840.3-201ENST00000541888 USP18Q9UMW8 372 aa8.05□□□□□ -1.12
AC005840.3-201ENST00000541888 SHROOM3Q8TF72 1996 aa8.05□□□□□ -1.12
AC005840.3-201ENST00000541888 M0QYT0 321 aa8.04□□□□□ -1.12
AC005840.3-201ENST00000541888 TNFRSF10BO14763 440 aa8.04□□□□□ -1.12
AC005840.3-201ENST00000541888 SYN3O14994 580 aa8.04□□□□□ -1.12
AC005840.3-201ENST00000541888 ERLIN1O75477 346 aa8.04□□□□□ -1.12
AC005840.3-201ENST00000541888 FGF18O76093 207 aa8.04□□□□□ -1.12
AC005840.3-201ENST00000541888 TBX18O95935 607 aa8.04□□□□□ -1.12
AC005840.3-201ENST00000541888 MYBL2P10244 700 aa8.04□□□□□ -1.12
AC005840.3-201ENST00000541888 RARAP10276 462 aa8.04□□□□□ -1.12
AC005840.3-201ENST00000541888 PRLRP16471 622 aa8.04□□□□□ -1.12
AC005840.3-201ENST00000541888 PAFAH1B1P43034 410 aa8.04□□□□□ -1.12
AC005840.3-201ENST00000541888 LMAN1P49257 510 aa8.04□□□□□ -1.12
AC005840.3-201ENST00000541888 SEC13P55735 322 aa8.04□□□□□ -1.12
AC005840.3-201ENST00000541888 YWHAZP63104 245 aaKnown RBP8.04□□□□□ -1.12
AC005840.3-201ENST00000541888 PIGHQ14442 188 aaPredicted RBP8.04□□□□□ -1.12
AC005840.3-201ENST00000541888 SHHQ15465 462 aa8.04□□□□□ -1.12
AC005840.3-201ENST00000541888 USP41Q3LFD5 358 aa8.04□□□□□ -1.12
AC005840.3-201ENST00000541888 RAB41Q5JT25 222 aa8.04□□□□□ -1.12
AC005840.3-201ENST00000541888 SEL1L2Q5TEA6 688 aa8.04□□□□□ -1.12
AC005840.3-201ENST00000541888 SAMD5Q5TGI4 173 aa8.04□□□□□ -1.12
AC005840.3-201ENST00000541888 TTC27Q6P3X3 843 aa8.04□□□□□ -1.12
AC005840.3-201ENST00000541888 NPNTQ6UXI9 565 aa8.04□□□□□ -1.12
AC005840.3-201ENST00000541888 DDX42Q86XP3 938 aaKnown RBP eCLIP8.04□□□□□ -1.12
AC005840.3-201ENST00000541888 HERC6Q8IVU3 1022 aa8.04□□□□□ -1.12
AC005840.3-201ENST00000541888 RHOT1Q8IXI2 618 aa8.04□□□□□ -1.12
AC005840.3-201ENST00000541888 TAB3Q8N5C8 712 aaPredicted RBP8.04□□□□□ -1.12
AC005840.3-201ENST00000541888 CEP112Q8N8E3 955 aa8.04□□□□□ -1.12
AC005840.3-201ENST00000541888 TRIM51Q9BSJ1 452 aa8.04□□□□□ -1.12
AC005840.3-201ENST00000541888 CALN1Q9BXU9 219 aa8.04□□□□□ -1.12
AC005840.3-201ENST00000541888 FUT8Q9BYC5 575 aa8.04□□□□□ -1.12
AC005840.3-201ENST00000541888 TRIM31Q9BZY9 425 aa8.04□□□□□ -1.12
AC005840.3-201ENST00000541888 CHST7Q9NS84 486 aa8.04□□□□□ -1.12
AC005840.3-201ENST00000541888 PIGVQ9NUD9 493 aa8.04□□□□□ -1.12
AC005840.3-201ENST00000541888 WDR35Q9P2L0 1181 aa8.04□□□□□ -1.12
AC005840.3-201ENST00000541888 ADAM21Q9UKJ8 722 aa8.04□□□□□ -1.12
AC005840.3-201ENST00000541888 HCN4Q9Y3Q4 1203 aa8.04□□□□□ -1.12
AC005840.3-201ENST00000541888 NR2E3Q9Y5X4 410 aa8.04□□□□□ -1.12
AC005840.3-201ENST00000541888 SLC4A7Q9Y6M7 1214 aa8.04□□□□□ -1.12
AC005840.3-201ENST00000541888 NUP205Q92621 2012 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms