RNA–Protein interactions for RNA: ENST00000541667.5

CLSTN3-211, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-211ENST00000541667 LYSMD4Q5XG99 296 aa12.33□□□□□ -0.44
CLSTN3-211ENST00000541667 SLC36A4Q6YBV0 504 aa12.33□□□□□ -0.44
CLSTN3-211ENST00000541667 RSRC2Q7L4I2 434 aaKnown RBP12.33□□□□□ -0.44
CLSTN3-211ENST00000541667 ADIPOR2Q86V24 386 aa12.33□□□□□ -0.44
CLSTN3-211ENST00000541667 IRF2BP1Q8IU81 584 aa12.33□□□□□ -0.44
CLSTN3-211ENST00000541667 PPM1KQ8N3J5 372 aa12.33□□□□□ -0.44
CLSTN3-211ENST00000541667 IRGQQ8WZA9 623 aa12.33□□□□□ -0.44
CLSTN3-211ENST00000541667 MYEOVQ96EZ4 313 aa12.33□□□□□ -0.44
CLSTN3-211ENST00000541667 HSFY1Q96LI6 401 aa12.33□□□□□ -0.44
CLSTN3-211ENST00000541667 TMEM9BQ9NQ34 198 aa12.33□□□□□ -0.44
CLSTN3-211ENST00000541667 OLA1Q9NTK5 396 aaKnown RBP12.33□□□□□ -0.44
CLSTN3-211ENST00000541667 CIZ1Q9ULV3 898 aaPredicted RBP12.33□□□□□ -0.44
CLSTN3-211ENST00000541667 CYP8B1Q9UNU6 501 aa12.33□□□□□ -0.44
CLSTN3-211ENST00000541667 CTNND2Q9UQB3 1225 aa12.33□□□□□ -0.44
CLSTN3-211ENST00000541667 MAP1BP46821 2468 aaKnown RBP12.33□□□□□ -0.44
CLSTN3-211ENST00000541667 PCDH15Q96QU1 1955 aa12.32□□□□□ -0.44
CLSTN3-211ENST00000541667 AP5Z1O43299 807 aa12.32□□□□□ -0.44
CLSTN3-211ENST00000541667 TSPAN3O60637 253 aa12.32□□□□□ -0.44
CLSTN3-211ENST00000541667 NCAM1P13591 858 aa12.32□□□□□ -0.44
CLSTN3-211ENST00000541667 ENGP17813 658 aa12.32□□□□□ -0.44
CLSTN3-211ENST00000541667 CSRP1P21291 193 aaKnown RBP12.32□□□□□ -0.44
CLSTN3-211ENST00000541667 PRKCHP24723 683 aa12.32□□□□□ -0.44
CLSTN3-211ENST00000541667 HOXD12P35452 270 aa12.32□□□□□ -0.44
CLSTN3-211ENST00000541667 RPL6Q02878 288 aaKnown RBP12.32□□□□□ -0.44
CLSTN3-211ENST00000541667 PTPRNQ16849 979 aa12.32□□□□□ -0.44
CLSTN3-211ENST00000541667 CCDC40Q4G0X9 1142 aa12.32□□□□□ -0.44
CLSTN3-211ENST00000541667 MPPE1Q53F39 396 aa12.32□□□□□ -0.44
CLSTN3-211ENST00000541667 FAM133BQ5BKY9 247 aaKnown RBP12.32□□□□□ -0.44
CLSTN3-211ENST00000541667 PSAPL1Q6NUJ1 521 aa12.32□□□□□ -0.44
CLSTN3-211ENST00000541667 SIX6OS1Q8N1H7 587 aa12.32□□□□□ -0.44
CLSTN3-211ENST00000541667 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.32□□□□□ -0.44
CLSTN3-211ENST00000541667 DDI1Q8WTU0 396 aa12.32□□□□□ -0.44
CLSTN3-211ENST00000541667 AZIN2Q96A70 460 aa12.32□□□□□ -0.44
CLSTN3-211ENST00000541667 TMA16Q96EY4 203 aaKnown RBP12.32□□□□□ -0.44
CLSTN3-211ENST00000541667 IPO9Q96P70 1041 aaKnown RBP12.32□□□□□ -0.44
CLSTN3-211ENST00000541667 TMEM245Q9H330 911 aa12.32□□□□□ -0.44
CLSTN3-211ENST00000541667 ACP6Q9NPH0 428 aa12.32□□□□□ -0.44
CLSTN3-211ENST00000541667 WSB2Q9NYS7 404 aaPredicted RBP12.32□□□□□ -0.44
CLSTN3-211ENST00000541667 USP36Q9P275 1121 aaKnown RBP12.32□□□□□ -0.44
CLSTN3-211ENST00000541667 CYTH4Q9UIA0 394 aa12.32□□□□□ -0.44
CLSTN3-211ENST00000541667 SLC6A14Q9UN76 642 aa12.32□□□□□ -0.44
CLSTN3-211ENST00000541667 ATXN2Q99700 1313 aaKnown RBP12.32□□□□□ -0.44
CLSTN3-211ENST00000541667 CACNA1BQ00975 2339 aa12.32□□□□□ -0.44
CLSTN3-211ENST00000541667 CACNA1EQ15878 2313 aa12.32□□□□□ -0.44
CLSTN3-211ENST00000541667 CKAP5Q14008 2032 aa12.32□□□□□ -0.44
CLSTN3-211ENST00000541667 ADAMTS9Q9P2N4 1935 aa12.31□□□□□ -0.44
CLSTN3-211ENST00000541667 BICDL2A1A5D9 508 aa12.31□□□□□ -0.44
CLSTN3-211ENST00000541667 NPC1O15118 1278 aa12.31□□□□□ -0.44
CLSTN3-211ENST00000541667 TIMM44O43615 452 aa12.31□□□□□ -0.44
CLSTN3-211ENST00000541667 LATS1O95835 1130 aa12.31□□□□□ -0.44
CLSTN3-211ENST00000541667 IGLV3-19P01714 112 aa12.31□□□□□ -0.44
CLSTN3-211ENST00000541667 SERPINF2P08697 491 aa12.31□□□□□ -0.44
CLSTN3-211ENST00000541667 SLC6A4P31645 630 aa12.31□□□□□ -0.44
CLSTN3-211ENST00000541667 HARS2P49590 506 aaKnown RBP12.31□□□□□ -0.44
CLSTN3-211ENST00000541667 PAK1Q13153 545 aa12.31□□□□□ -0.44
CLSTN3-211ENST00000541667 SEMA3BQ13214 749 aa12.31□□□□□ -0.44
CLSTN3-211ENST00000541667 EIF4EBP2Q13542 120 aaPredicted RBP12.31□□□□□ -0.44
CLSTN3-211ENST00000541667 EIF4HQ15056 248 aaKnown RBP12.31□□□□□ -0.44
CLSTN3-211ENST00000541667 STILQ15468 1287 aa12.31□□□□□ -0.44
CLSTN3-211ENST00000541667 DUOXA1Q1HG43 343 aa12.31□□□□□ -0.44
CLSTN3-211ENST00000541667 SH3PXD2AQ5TCZ1 1133 aa12.31□□□□□ -0.44
CLSTN3-211ENST00000541667 PIK3R6Q5UE93 754 aa12.31□□□□□ -0.44
CLSTN3-211ENST00000541667 DAB2IPQ5VWQ8 1189 aa12.31□□□□□ -0.44
CLSTN3-211ENST00000541667 NADSYN1Q6IA69 706 aa12.31□□□□□ -0.44
CLSTN3-211ENST00000541667 DPY19L2P1Q6NXN4 242 aa12.31□□□□□ -0.44
CLSTN3-211ENST00000541667 DENND1BQ6P3S1 775 aa12.31□□□□□ -0.44
CLSTN3-211ENST00000541667 ANKS1BQ7Z6G8 1248 aa12.31□□□□□ -0.44
CLSTN3-211ENST00000541667 PIP4P1Q86T03 277 aa12.31□□□□□ -0.44
CLSTN3-211ENST00000541667 TMPRSS6Q8IU80 811 aa12.31□□□□□ -0.44
CLSTN3-211ENST00000541667 SCUBE3Q8IX30 993 aa12.31□□□□□ -0.44
CLSTN3-211ENST00000541667 TRIML1Q8N9V2 468 aa12.31□□□□□ -0.44
CLSTN3-211ENST00000541667 WFDC5Q8TCV5 224 aa12.31□□□□□ -0.44
CLSTN3-211ENST00000541667 RNF139Q8WU17 664 aa12.31□□□□□ -0.44
CLSTN3-211ENST00000541667 DNASE2BQ8WZ79 361 aa12.31□□□□□ -0.44
CLSTN3-211ENST00000541667 SLC39A13Q96H72 371 aa12.31□□□□□ -0.44
CLSTN3-211ENST00000541667 FCRL2Q96LA5 508 aaPredicted RBP12.31□□□□□ -0.44
CLSTN3-211ENST00000541667 SLC4A5Q9BY07 1137 aa12.31□□□□□ -0.44
CLSTN3-211ENST00000541667 INTS2Q9H0H0 1204 aaKnown RBP12.31□□□□□ -0.44
CLSTN3-211ENST00000541667 PRDM16Q9HAZ2 1276 aa12.31□□□□□ -0.44
CLSTN3-211ENST00000541667 BECN2A8MW95 431 aa12.3□□□□□ -0.44
CLSTN3-211ENST00000541667 M0QYV0 167 aa12.3□□□□□ -0.44
CLSTN3-211ENST00000541667 GJB3O75712 270 aa12.3□□□□□ -0.44
CLSTN3-211ENST00000541667 KRT37O76014 449 aa12.3□□□□□ -0.44
CLSTN3-211ENST00000541667 GNA14O95837 355 aa12.3□□□□□ -0.44
CLSTN3-211ENST00000541667 TOP3BO95985 862 aaKnown RBP12.3□□□□□ -0.44
CLSTN3-211ENST00000541667 AFPP02771 609 aaKnown RBP12.3□□□□□ -0.44
CLSTN3-211ENST00000541667 LTFP02788 710 aa12.3□□□□□ -0.44
CLSTN3-211ENST00000541667 CYBBP04839 570 aa12.3□□□□□ -0.44
CLSTN3-211ENST00000541667 CEACAM1P13688 526 aa12.3□□□□□ -0.44
CLSTN3-211ENST00000541667 MAOBP27338 520 aa12.3□□□□□ -0.44
CLSTN3-211ENST00000541667 CD6P30203 668 aa12.3□□□□□ -0.44
CLSTN3-211ENST00000541667 NOVA1P51513 510 aaKnown RBP12.3□□□□□ -0.44
CLSTN3-211ENST00000541667 TPMTP51580 245 aa12.3□□□□□ -0.44
CLSTN3-211ENST00000541667 APBA1Q02410 837 aa12.3□□□□□ -0.44
CLSTN3-211ENST00000541667 RING1Q06587 406 aa12.3□□□□□ -0.44
CLSTN3-211ENST00000541667 LMAN2Q12907 356 aa12.3□□□□□ -0.44
CLSTN3-211ENST00000541667 CAMK2GQ13555 558 aaPredicted RBP12.3□□□□□ -0.44
CLSTN3-211ENST00000541667 MPP7Q5T2T1 576 aa12.3□□□□□ -0.44
CLSTN3-211ENST00000541667 SYPL2Q5VXT5 272 aa12.3□□□□□ -0.44
CLSTN3-211ENST00000541667 RFWD3Q6PCD5 774 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms