RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 WDR35Q9P2L0 1181 aa17.41■□□□□ 0.38
UBC-208ENST00000540700 MYO1AQ9UBC5 1043 aa17.41■□□□□ 0.38
UBC-208ENST00000540700 ARHGAP26Q9UNA1 814 aa17.41■□□□□ 0.38
UBC-208ENST00000540700 EPN1Q9Y6I3 576 aaPredicted RBP17.41■□□□□ 0.38
UBC-208ENST00000540700 NUP210Q8TEM1 1887 aaPredicted RBP17.41■□□□□ 0.38
UBC-208ENST00000540700 CEP295Q9C0D2 2601 aa17.41■□□□□ 0.38
UBC-208ENST00000540700 ANKRD62A6NC57 917 aa17.4■□□□□ 0.38
UBC-208ENST00000540700 C2CD4BA6NLJ0 364 aa17.4■□□□□ 0.38
UBC-208ENST00000540700 SIGLEC16A6NMB1 481 aa17.4■□□□□ 0.38
UBC-208ENST00000540700 SOBPA7XYQ1 873 aa17.4■□□□□ 0.38
UBC-208ENST00000540700 GOLGA6L6A8MZA4 724 aa17.4■□□□□ 0.38
UBC-208ENST00000540700 CYP1A2P05177 515 aa17.4■□□□□ 0.38
UBC-208ENST00000540700 PFKLP17858 780 aa17.4■□□□□ 0.38
UBC-208ENST00000540700 KCNA4P22459 653 aa17.4■□□□□ 0.38
UBC-208ENST00000540700 ATP5C1P36542 298 aaKnown RBP17.4■□□□□ 0.38
UBC-208ENST00000540700 SNX16P57768 344 aa17.4■□□□□ 0.38
UBC-208ENST00000540700 ZNF252P-AS1Q0IIN9 211 aa17.4■□□□□ 0.38
UBC-208ENST00000540700 USP4Q13107 963 aa17.4■□□□□ 0.38
UBC-208ENST00000540700 DCAF6Q58WW2 860 aa17.4■□□□□ 0.38
UBC-208ENST00000540700 SH3PXD2AQ5TCZ1 1133 aa17.4■□□□□ 0.38
UBC-208ENST00000540700 PPP1R2P3Q6NXS1 205 aa17.4■□□□□ 0.38
UBC-208ENST00000540700 VITQ6UXI7 678 aa17.4■□□□□ 0.38
UBC-208ENST00000540700 ZNF852Q6ZMS4 543 aa17.4■□□□□ 0.38
UBC-208ENST00000540700 BNIPLQ7Z465 357 aa17.4■□□□□ 0.38
UBC-208ENST00000540700 MIB1Q86YT6 1006 aa17.4■□□□□ 0.38
UBC-208ENST00000540700 SH3RF2Q8TEC5 729 aa17.4■□□□□ 0.38
UBC-208ENST00000540700 RXFP2Q8WXD0 754 aa17.4■□□□□ 0.38
UBC-208ENST00000540700 NELL1Q92832 810 aa17.4■□□□□ 0.38
UBC-208ENST00000540700 NT5C3BQ969T7 300 aa17.4■□□□□ 0.38
UBC-208ENST00000540700 CFAP57Q96MR6 1250 aa17.4■□□□□ 0.38
UBC-208ENST00000540700 MCEEQ96PE7 176 aa17.4■□□□□ 0.38
UBC-208ENST00000540700 NELL2Q99435 816 aa17.4■□□□□ 0.38
UBC-208ENST00000540700 NPY6RQ99463 290 aa17.4■□□□□ 0.38
UBC-208ENST00000540700 DESI2Q9BSY9 194 aa17.4■□□□□ 0.38
UBC-208ENST00000540700 SELENOOQ9BVL4 669 aa17.4■□□□□ 0.38
UBC-208ENST00000540700 PRMT8Q9NR22 394 aaPredicted RBP17.4■□□□□ 0.38
UBC-208ENST00000540700 MARCH2Q9P0N8 246 aa17.4■□□□□ 0.38
UBC-208ENST00000540700 DNMT3LQ9UJW3 386 aa17.4■□□□□ 0.38
UBC-208ENST00000540700 RAB23Q9ULC3 237 aa17.4■□□□□ 0.38
UBC-208ENST00000540700 NDRG2Q9UN36 371 aaKnown RBP17.4■□□□□ 0.38
UBC-208ENST00000540700 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.4■□□□□ 0.38
UBC-208ENST00000540700 HEPACAM2A8MVW5 462 aa17.39■□□□□ 0.37
UBC-208ENST00000540700 LEFTY2O00292 366 aa17.39■□□□□ 0.37
UBC-208ENST00000540700 HMBSP08397 361 aa17.39■□□□□ 0.37
UBC-208ENST00000540700 H2AFZP0C0S5 128 aa17.39■□□□□ 0.37
UBC-208ENST00000540700 KRT3P12035 628 aa17.39■□□□□ 0.37
UBC-208ENST00000540700 NOS2P35228 1153 aa17.39■□□□□ 0.37
UBC-208ENST00000540700 CYLC1P35663 651 aaPredicted RBP17.39■□□□□ 0.37
UBC-208ENST00000540700 AVPR1AP37288 418 aa17.39■□□□□ 0.37
UBC-208ENST00000540700 MATKP42679 507 aa17.39■□□□□ 0.37
UBC-208ENST00000540700 C15orf59Q2T9L4 293 aaPredicted RBP17.39■□□□□ 0.37
UBC-208ENST00000540700 CCDC14Q49A88 953 aa17.39■□□□□ 0.37
UBC-208ENST00000540700 PPM1JQ5JR12 505 aa17.39■□□□□ 0.37
UBC-208ENST00000540700 H2AFVQ71UI9 128 aa17.39■□□□□ 0.37
UBC-208ENST00000540700 RSRC2Q7L4I2 434 aaKnown RBP17.39■□□□□ 0.37
UBC-208ENST00000540700 ARCQ7LC44 396 aa17.39■□□□□ 0.37
UBC-208ENST00000540700 BTBD6Q96KE9 485 aa17.39■□□□□ 0.37
UBC-208ENST00000540700 ZNF830Q96NB3 372 aaPredicted RBP17.39■□□□□ 0.37
UBC-208ENST00000540700 PPP1R9BQ96SB3 815 aa17.39■□□□□ 0.37
UBC-208ENST00000540700 TBCBQ99426 244 aa17.39■□□□□ 0.37
UBC-208ENST00000540700 TDP1Q9NUW8 608 aa17.39■□□□□ 0.37
UBC-208ENST00000540700 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.39■□□□□ 0.372e-9■■□□□ 14
UBC-208ENST00000540700 PCDHA13Q9Y5I0 950 aa17.39■□□□□ 0.37
UBC-208ENST00000540700 F5P12259 2224 aa17.39■□□□□ 0.37
UBC-208ENST00000540700 CNOT1A5YKK6 2376 aaKnown RBP17.38■□□□□ 0.37
UBC-208ENST00000540700 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.38■□□□□ 0.37
UBC-208ENST00000540700 SLC12A8A0AV02 714 aa17.38■□□□□ 0.37
UBC-208ENST00000540700 TMEM191CA6NGB0 347 aa17.38■□□□□ 0.37
UBC-208ENST00000540700 CAPN9O14815 690 aa17.38■□□□□ 0.37
UBC-208ENST00000540700 TRUB2O95900 331 aaKnown RBP17.38■□□□□ 0.37
UBC-208ENST00000540700 IGLV3-27P01718 113 aa17.38■□□□□ 0.37
UBC-208ENST00000540700 KLKB1P03952 638 aa17.38■□□□□ 0.37
UBC-208ENST00000540700 TMEM253P0C7T8 217 aa17.38■□□□□ 0.37
UBC-208ENST00000540700 MYBL1P10243 752 aa17.38■□□□□ 0.37
UBC-208ENST00000540700 IRF1P10914 325 aa17.38■□□□□ 0.37
UBC-208ENST00000540700 MAGEA1P43355 309 aa17.38■□□□□ 0.37
UBC-208ENST00000540700 RPS9P46781 194 aaKnown RBP17.38■□□□□ 0.37
UBC-208ENST00000540700 PRR23BQ6ZRT6 265 aa17.38■□□□□ 0.37
UBC-208ENST00000540700 CPNE8Q86YQ8 564 aa17.38■□□□□ 0.37
UBC-208ENST00000540700 RNF139Q8WU17 664 aa17.38■□□□□ 0.37
UBC-208ENST00000540700 GOLGA1Q92805 767 aa17.38■□□□□ 0.37
UBC-208ENST00000540700 ELSPBP1Q96BH3 223 aa17.38■□□□□ 0.37
UBC-208ENST00000540700 SLC39A13Q96H72 371 aa17.38■□□□□ 0.37
UBC-208ENST00000540700 ANLNQ9NQW6 1124 aa17.38■□□□□ 0.37
UBC-208ENST00000540700 PARVAQ9NVD7 372 aa17.38■□□□□ 0.37
UBC-208ENST00000540700 ZMYM5Q9UJ78 669 aa17.38■□□□□ 0.37
UBC-208ENST00000540700 MRPS17Q9Y2R5 130 aaKnown RBP17.38■□□□□ 0.37
UBC-208ENST00000540700 HELZP42694 1942 aaKnown RBP17.38■□□□□ 0.37
UBC-208ENST00000540700 I6L893 689 aaPredicted RBP17.37■□□□□ 0.37
UBC-208ENST00000540700 IRAK2O43187 625 aa17.37■□□□□ 0.37
UBC-208ENST00000540700 CCP110O43303 1012 aa17.37■□□□□ 0.37
UBC-208ENST00000540700 STC2O76061 302 aa17.37■□□□□ 0.37
UBC-208ENST00000540700 TCF3P15923 654 aa17.37■□□□□ 0.37
UBC-208ENST00000540700 SULT1E1P49888 294 aa17.37■□□□□ 0.37
UBC-208ENST00000540700 FZD5Q13467 585 aa17.37■□□□□ 0.37
UBC-208ENST00000540700 GRM2Q14416 872 aa17.37■□□□□ 0.37
UBC-208ENST00000540700 TRIM11Q96F44 468 aa17.37■□□□□ 0.37
UBC-208ENST00000540700 P2RY11Q96G91 374 aa17.37■□□□□ 0.37
UBC-208ENST00000540700 FCRL2Q96LA5 508 aaPredicted RBP17.37■□□□□ 0.37
UBC-208ENST00000540700 CDK5RAP1Q96SZ6 601 aaKnown RBP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms