RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 SMAD3P84022 425 aaKnown RBP8.96□□□□□ -0.98
DDB1-217ENST00000540166 CENPCQ03188 943 aa8.96□□□□□ -0.98
DDB1-217ENST00000540166 MTM1Q13496 603 aa8.96□□□□□ -0.98
DDB1-217ENST00000540166 GRIK4Q16099 956 aa8.96□□□□□ -0.98
DDB1-217ENST00000540166 MAPK6Q16659 721 aa8.96□□□□□ -0.98
DDB1-217ENST00000540166 WDR44Q5JSH3 913 aa8.96□□□□□ -0.98
DDB1-217ENST00000540166 TCHHL1Q5QJ38 904 aaPredicted RBP8.96□□□□□ -0.98
DDB1-217ENST00000540166 SPATA31D4Q6ZUB0 917 aa8.96□□□□□ -0.98
DDB1-217ENST00000540166 E2F7Q96AV8 911 aa8.96□□□□□ -0.98
DDB1-217ENST00000540166 EME1Q96AY2 570 aa8.96□□□□□ -0.98
DDB1-217ENST00000540166 TRIM43Q96BQ3 446 aaPredicted RBP8.96□□□□□ -0.98
DDB1-217ENST00000540166 NLRP4Q96MN2 994 aa8.96□□□□□ -0.98
DDB1-217ENST00000540166 GCOM2Q9BZD3 368 aaPredicted RBP8.96□□□□□ -0.98
DDB1-217ENST00000540166 TMEM206Q9H813 350 aa8.96□□□□□ -0.98
DDB1-217ENST00000540166 SEL1LQ9UBV2 794 aa8.96□□□□□ -0.98
DDB1-217ENST00000540166 SLC7A8Q9UHI5 535 aa8.96□□□□□ -0.98
DDB1-217ENST00000540166 PSME4Q14997 1843 aa8.95□□□□□ -0.98
DDB1-217ENST00000540166 GPR182O15218 404 aa8.95□□□□□ -0.98
DDB1-217ENST00000540166 ZNF862O60290 1169 aa8.95□□□□□ -0.98
DDB1-217ENST00000540166 MUTP22033 750 aa8.95□□□□□ -0.98
DDB1-217ENST00000540166 FDFT1P37268 417 aa8.95□□□□□ -0.98
DDB1-217ENST00000540166 SLC1A1P43005 524 aa8.95□□□□□ -0.98
DDB1-217ENST00000540166 ALDH1A3P47895 512 aa8.95□□□□□ -0.98
DDB1-217ENST00000540166 HSPA13P48723 471 aa8.95□□□□□ -0.98
DDB1-217ENST00000540166 JAK3P52333 1124 aa8.95□□□□□ -0.98
DDB1-217ENST00000540166 SLC25A3Q00325 362 aa8.95□□□□□ -0.98
DDB1-217ENST00000540166 CCDC153Q494R4 210 aa8.95□□□□□ -0.98
DDB1-217ENST00000540166 HYIQ5T013 277 aa8.95□□□□□ -0.98
DDB1-217ENST00000540166 GPR141Q7Z602 305 aa8.95□□□□□ -0.98
DDB1-217ENST00000540166 RHPN2Q8IUC4 686 aa8.95□□□□□ -0.98
DDB1-217ENST00000540166 BRD8Q9H0E9 1235 aa8.95□□□□□ -0.98
DDB1-217ENST00000540166 PARVBQ9HBI1 364 aa8.95□□□□□ -0.98
DDB1-217ENST00000540166 ACP6Q9NPH0 428 aa8.95□□□□□ -0.98
DDB1-217ENST00000540166 KCNH7Q9NS40 1196 aa8.95□□□□□ -0.98
DDB1-217ENST00000540166 DDX43Q9NXZ2 648 aaKnown RBP8.95□□□□□ -0.98
DDB1-217ENST00000540166 PCDHA2Q9Y5H9 948 aa8.95□□□□□ -0.98
DDB1-217ENST00000540166 HTR3EA5X5Y0 456 aa8.95□□□□□ -0.98
DDB1-217ENST00000540166 EML1O00423 815 aa8.95□□□□□ -0.98
DDB1-217ENST00000540166 TGFB1I1O43294 461 aa8.95□□□□□ -0.98
DDB1-217ENST00000540166 CA3P07451 260 aa8.95□□□□□ -0.98
DDB1-217ENST00000540166 CDK4P11802 303 aa8.95□□□□□ -0.98
DDB1-217ENST00000540166 HSDL1Q3SXM5 330 aa8.95□□□□□ -0.98
DDB1-217ENST00000540166 TMCO4Q5TGY1 634 aa8.95□□□□□ -0.98
DDB1-217ENST00000540166 TAPT1Q6NXT6 567 aa8.95□□□□□ -0.98
DDB1-217ENST00000540166 PADI6Q6TGC4 694 aa8.95□□□□□ -0.98
DDB1-217ENST00000540166 ANKRD33Q7Z3H0 272 aa8.95□□□□□ -0.98
DDB1-217ENST00000540166 PDSS2Q86YH6 399 aa8.95□□□□□ -0.98
DDB1-217ENST00000540166 CLVS1Q8IUQ0 354 aaPredicted RBP8.95□□□□□ -0.98
DDB1-217ENST00000540166 KLHDC9Q8NEP7 349 aa8.95□□□□□ -0.98
DDB1-217ENST00000540166 FAM172AQ8WUF8 416 aa8.95□□□□□ -0.98
DDB1-217ENST00000540166 ATP2A3Q93084 1043 aa8.95□□□□□ -0.98
DDB1-217ENST00000540166 CMTM5Q96DZ9 223 aa8.95□□□□□ -0.98
DDB1-217ENST00000540166 CEP170P1Q96L14 293 aa8.95□□□□□ -0.98
DDB1-217ENST00000540166 APOL6Q9BWW8 343 aa8.95□□□□□ -0.98
DDB1-217ENST00000540166 KLHL25Q9H0H3 589 aa8.95□□□□□ -0.98
DDB1-217ENST00000540166 RNPEPQ9H4A4 650 aa8.95□□□□□ -0.98
DDB1-217ENST00000540166 COQ6Q9Y2Z9 468 aa8.95□□□□□ -0.98
DDB1-217ENST00000540166 FADS3Q9Y5Q0 445 aa8.95□□□□□ -0.98
DDB1-217ENST00000540166 GPC6Q9Y625 555 aaPredicted RBP8.95□□□□□ -0.98
DDB1-217ENST00000540166 DOCK1Q14185 1865 aa8.95□□□□□ -0.98
DDB1-217ENST00000540166 SIGLEC16A6NMB1 481 aa8.95□□□□□ -0.98
DDB1-217ENST00000540166 INO80B-WBP1J3KQ70 363 aa8.95□□□□□ -0.98
DDB1-217ENST00000540166 EIF3DO15371 548 aaKnown RBP eCLIP8.95□□□□□ -0.98
DDB1-217ENST00000540166 HOXA2O43364 376 aa8.95□□□□□ -0.98
DDB1-217ENST00000540166 ABHD2P08910 425 aa8.95□□□□□ -0.98
DDB1-217ENST00000540166 FAM163BP0C2L3 166 aa8.95□□□□□ -0.98
DDB1-217ENST00000540166 SPATA31C1P0DKV0 1188 aa8.95□□□□□ -0.98
DDB1-217ENST00000540166 INSRRP14616 1297 aa8.95□□□□□ -0.98
DDB1-217ENST00000540166 TNNI1P19237 187 aa8.95□□□□□ -0.98
DDB1-217ENST00000540166 NDUFV1P49821 464 aa8.95□□□□□ -0.98
DDB1-217ENST00000540166 RAP1GDS1P52306 607 aa8.95□□□□□ -0.98
DDB1-217ENST00000540166 PEX3P56589 373 aa8.95□□□□□ -0.98
DDB1-217ENST00000540166 ACTR2P61160 394 aa8.95□□□□□ -0.98
DDB1-217ENST00000540166 TFDP1Q14186 410 aa8.95□□□□□ -0.98
DDB1-217ENST00000540166 EPC2Q52LR7 807 aa8.95□□□□□ -0.98
DDB1-217ENST00000540166 SFT2D3Q587I9 215 aa8.95□□□□□ -0.98
DDB1-217ENST00000540166 URGCPQ8TCY9 931 aa8.95□□□□□ -0.98
DDB1-217ENST00000540166 ZNF668Q96K58 619 aaPredicted RBP8.95□□□□□ -0.98
DDB1-217ENST00000540166 BTBD9Q96Q07 612 aa8.95□□□□□ -0.98
DDB1-217ENST00000540166 PAFAH2Q99487 392 aa8.95□□□□□ -0.98
DDB1-217ENST00000540166 CDX2Q99626 313 aaPredicted RBP8.95□□□□□ -0.98
DDB1-217ENST00000540166 DCLK3Q9C098 648 aa8.95□□□□□ -0.98
DDB1-217ENST00000540166 TRNAU1APQ9NX07 287 aaKnown RBP8.95□□□□□ -0.98
DDB1-217ENST00000540166 COG5Q9UP83 839 aa8.95□□□□□ -0.98
DDB1-217ENST00000540166 EXOC7Q9UPT5 735 aa8.95□□□□□ -0.98
DDB1-217ENST00000540166 LDHAP00338 332 aaKnown RBP8.94□□□□□ -0.98
DDB1-217ENST00000540166 PROCP04070 461 aa8.94□□□□□ -0.98
DDB1-217ENST00000540166 COL6A1P12109 1028 aa8.94□□□□□ -0.98
DDB1-217ENST00000540166 EEF1DP29692 281 aaKnown RBP8.94□□□□□ -0.98
DDB1-217ENST00000540166 BASP1P80723 227 aaKnown RBP8.94□□□□□ -0.98
DDB1-217ENST00000540166 CHI3L2Q15782 390 aa8.94□□□□□ -0.98
DDB1-217ENST00000540166 ITPRIPL1Q6GPH6 555 aa8.94□□□□□ -0.98
DDB1-217ENST00000540166 ZNF720Q7Z2F6 126 aa8.94□□□□□ -0.98
DDB1-217ENST00000540166 TREML1Q86YW5 311 aa8.94□□□□□ -0.98
DDB1-217ENST00000540166 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.94□□□□□ -0.98
DDB1-217ENST00000540166 FAM126BQ8IXS8 530 aa8.94□□□□□ -0.98
DDB1-217ENST00000540166 ZCCHC9Q8N567 271 aaKnown RBP8.94□□□□□ -0.98
DDB1-217ENST00000540166 SCAIQ8N9R8 606 aa8.94□□□□□ -0.98
DDB1-217ENST00000540166 POMGNT1Q8WZA1 660 aa8.94□□□□□ -0.98
DDB1-217ENST00000540166 TMEM169Q96HH4 297 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms