RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 CDH17Q12864 832 aa6.64□□□□□ -1.35
LSAMP-207ENST00000539563 MFSD10Q14728 455 aa6.64□□□□□ -1.35
LSAMP-207ENST00000539563 CHMP1BQ7LBR1 199 aa6.64□□□□□ -1.35
LSAMP-207ENST00000539563 C10orf53Q8N6V4 93 aa6.64□□□□□ -1.35
LSAMP-207ENST00000539563 DCLK3Q9C098 648 aa6.64□□□□□ -1.35
LSAMP-207ENST00000539563 CYP4F12Q9HCS2 524 aa6.64□□□□□ -1.35
LSAMP-207ENST00000539563 RGS18Q9NS28 235 aa6.64□□□□□ -1.35
LSAMP-207ENST00000539563 CYP39A1Q9NYL5 469 aa6.64□□□□□ -1.35
LSAMP-207ENST00000539563 ARHGAP20Q9P2F6 1191 aa6.64□□□□□ -1.35
LSAMP-207ENST00000539563 SCAF8Q9UPN6 1271 aaKnown RBP6.64□□□□□ -1.35
LSAMP-207ENST00000539563 DNALI1O14645 258 aaPredicted RBP6.64□□□□□ -1.35
LSAMP-207ENST00000539563 INSRRP14616 1297 aa6.64□□□□□ -1.35
LSAMP-207ENST00000539563 YWHAQP27348 245 aa6.64□□□□□ -1.35
LSAMP-207ENST00000539563 OR1E1P30953 314 aa6.64□□□□□ -1.35
LSAMP-207ENST00000539563 KRT20P35900 424 aa6.64□□□□□ -1.35
LSAMP-207ENST00000539563 GP5P40197 560 aa6.64□□□□□ -1.35
LSAMP-207ENST00000539563 SCTRP47872 440 aa6.64□□□□□ -1.35
LSAMP-207ENST00000539563 CCT8P50990 548 aa6.64□□□□□ -1.35
LSAMP-207ENST00000539563 SLC16A1P53985 500 aa6.64□□□□□ -1.35
LSAMP-207ENST00000539563 PRKAA1Q13131 559 aa6.64□□□□□ -1.35
LSAMP-207ENST00000539563 MMRN1Q13201 1228 aa6.64□□□□□ -1.35
LSAMP-207ENST00000539563 C1DQ13901 141 aaKnown RBP6.64□□□□□ -1.35
LSAMP-207ENST00000539563 PCBP1Q15365 356 aaKnown RBP eCLIP6.64□□□□□ -1.35
LSAMP-207ENST00000539563 CCDC81Q6ZN84 652 aa6.64□□□□□ -1.35
LSAMP-207ENST00000539563 MICU2Q8IYU8 434 aa6.64□□□□□ -1.35
LSAMP-207ENST00000539563 EID3Q8N140 333 aa6.64□□□□□ -1.35
LSAMP-207ENST00000539563 NFKBIZQ9BYH8 718 aa6.64□□□□□ -1.35
LSAMP-207ENST00000539563 NLNQ9BYT8 704 aa6.64□□□□□ -1.35
LSAMP-207ENST00000539563 GPRC5DQ9NZD1 345 aa6.64□□□□□ -1.35
LSAMP-207ENST00000539563 FRMPD4Q14CM0 1322 aa6.64□□□□□ -1.35
LSAMP-207ENST00000539563 MYH11P35749 1972 aa6.64□□□□□ -1.35
LSAMP-207ENST00000539563 OR56A5P0C7T3 313 aa6.64□□□□□ -1.35
LSAMP-207ENST00000539563 CYP2A6P11509 494 aaPredicted RBP6.64□□□□□ -1.35
LSAMP-207ENST00000539563 ZNF7P17097 686 aaPredicted RBP6.64□□□□□ -1.35
LSAMP-207ENST00000539563 PBLDP30039 288 aaPredicted RBP6.64□□□□□ -1.35
LSAMP-207ENST00000539563 SKIV2L2P42285 1042 aaKnown RBP6.64□□□□□ -1.35
LSAMP-207ENST00000539563 SARSP49591 514 aaKnown RBP6.64□□□□□ -1.35
LSAMP-207ENST00000539563 PMS1P54277 932 aaKnown RBP6.64□□□□□ -1.35
LSAMP-207ENST00000539563 ZNF786Q8N393 782 aa6.64□□□□□ -1.35
LSAMP-207ENST00000539563 TATDN2Q93075 761 aa6.64□□□□□ -1.35
LSAMP-207ENST00000539563 REPS1Q96D71 796 aa6.64□□□□□ -1.35
LSAMP-207ENST00000539563 FAM163AQ96GL9 167 aaPredicted RBP6.64□□□□□ -1.35
LSAMP-207ENST00000539563 VAT1Q99536 393 aa6.64□□□□□ -1.35
LSAMP-207ENST00000539563 KCTD14Q9BQ13 255 aaPredicted RBP6.64□□□□□ -1.35
LSAMP-207ENST00000539563 TMEM120AQ9BXJ8 343 aa6.64□□□□□ -1.35
LSAMP-207ENST00000539563 MMADHCQ9H3L0 296 aaPredicted RBP6.64□□□□□ -1.35
LSAMP-207ENST00000539563 TAS2R13Q9NYV9 303 aa6.64□□□□□ -1.35
LSAMP-207ENST00000539563 STMN3Q9NZ72 180 aa6.64□□□□□ -1.35
LSAMP-207ENST00000539563 KLHL20Q9Y2M5 609 aa6.64□□□□□ -1.35
LSAMP-207ENST00000539563 TRPV2Q9Y5S1 764 aa6.64□□□□□ -1.35
LSAMP-207ENST00000539563 SAC3D1A6NKF1 404 aa6.64□□□□□ -1.35
LSAMP-207ENST00000539563 ACKR2O00590 384 aa6.64□□□□□ -1.35
LSAMP-207ENST00000539563 KRT6AP02538 564 aa6.64□□□□□ -1.35
LSAMP-207ENST00000539563 KRT6BP04259 564 aa6.64□□□□□ -1.35
LSAMP-207ENST00000539563 CPA2P48052 419 aa6.64□□□□□ -1.35
LSAMP-207ENST00000539563 KRT6CP48668 564 aa6.64□□□□□ -1.35
LSAMP-207ENST00000539563 TUFMP49411 452 aaKnown RBP6.64□□□□□ -1.35
LSAMP-207ENST00000539563 CDK16Q00536 496 aa6.64□□□□□ -1.35
LSAMP-207ENST00000539563 MTM1Q13496 603 aa6.64□□□□□ -1.35
LSAMP-207ENST00000539563 CYB5D1Q6P9G0 228 aa6.64□□□□□ -1.35
LSAMP-207ENST00000539563 INTS13Q9NVM9 706 aa6.64□□□□□ -1.35
LSAMP-207ENST00000539563 ZSCAN32Q9NX65 697 aa6.64□□□□□ -1.35
LSAMP-207ENST00000539563 MAPRE3Q9UPY8 281 aa6.64□□□□□ -1.35
LSAMP-207ENST00000539563 V9GYQ6 96 aa6.64□□□□□ -1.35
LSAMP-207ENST00000539563 MYH8P13535 1937 aa6.64□□□□□ -1.35
LSAMP-207ENST00000539563 PRR23AA6NEV1 266 aa6.64□□□□□ -1.35
LSAMP-207ENST00000539563 DDTLA6NHG4 134 aaPredicted RBP6.64□□□□□ -1.35
LSAMP-207ENST00000539563 RIPK2O43353 540 aa6.64□□□□□ -1.35
LSAMP-207ENST00000539563 KATNA1O75449 491 aa6.64□□□□□ -1.35
LSAMP-207ENST00000539563 SLITRK3O94933 977 aa6.64□□□□□ -1.35
LSAMP-207ENST00000539563 PGAM1P18669 254 aa6.64□□□□□ -1.35
LSAMP-207ENST00000539563 PSEN2P49810 448 aa6.64□□□□□ -1.35
LSAMP-207ENST00000539563 NR6A1Q15406 480 aa6.64□□□□□ -1.35
LSAMP-207ENST00000539563 TRMT5Q32P41 509 aaKnown RBP6.64□□□□□ -1.35
LSAMP-207ENST00000539563 KCNMB4Q86W47 210 aa6.64□□□□□ -1.35
LSAMP-207ENST00000539563 CDK20Q8IZL9 346 aa6.64□□□□□ -1.35
LSAMP-207ENST00000539563 BHMTQ93088 406 aa6.64□□□□□ -1.35
LSAMP-207ENST00000539563 SGF29Q96ES7 293 aa6.64□□□□□ -1.35
LSAMP-207ENST00000539563 PANX3Q96QZ0 392 aa6.64□□□□□ -1.35
LSAMP-207ENST00000539563 PNKPQ96T60 521 aa6.64□□□□□ -1.35
LSAMP-207ENST00000539563 THAP1Q9NVV9 213 aa6.64□□□□□ -1.35
LSAMP-207ENST00000539563 NCF1BA6NI72 391 aaPredicted RBP6.64□□□□□ -1.35
LSAMP-207ENST00000539563 EIF4E1BA6NMX2 242 aaKnown RBP6.64□□□□□ -1.35
LSAMP-207ENST00000539563 NCF1CA8MVU1 366 aaPredicted RBP6.64□□□□□ -1.35
LSAMP-207ENST00000539563 AMHP03971 560 aa6.64□□□□□ -1.35
LSAMP-207ENST00000539563 NCF1P14598 390 aaPredicted RBP6.64□□□□□ -1.35
LSAMP-207ENST00000539563 KLRC2P26717 231 aa6.64□□□□□ -1.35
LSAMP-207ENST00000539563 SHMT1P34896 483 aa6.64□□□□□ -1.35
LSAMP-207ENST00000539563 ZCWPW2Q504Y3 356 aa6.64□□□□□ -1.35
LSAMP-207ENST00000539563 ZFP1Q6P2D0 407 aa6.64□□□□□ -1.35
LSAMP-207ENST00000539563 GLT6D1Q7Z4J2 308 aa6.64□□□□□ -1.35
LSAMP-207ENST00000539563 KAZALD1Q96I82 304 aa6.64□□□□□ -1.35
LSAMP-207ENST00000539563 UROC1Q96N76 676 aa6.64□□□□□ -1.35
LSAMP-207ENST00000539563 CEP44Q9C0F1 390 aa6.64□□□□□ -1.35
LSAMP-207ENST00000539563 ELOVL6Q9H5J4 265 aa6.64□□□□□ -1.35
LSAMP-207ENST00000539563 FAM153AQ9UHL3 310 aa6.64□□□□□ -1.35
LSAMP-207ENST00000539563 KAT6AQ92794 2004 aa6.64□□□□□ -1.35
LSAMP-207ENST00000539563 GNG14A0A1W2PPG7 69 aa6.64□□□□□ -1.35
LSAMP-207ENST00000539563 GHRP10912 638 aa6.64□□□□□ -1.35
LSAMP-207ENST00000539563 PABPC1P11940 636 aaKnown RBP6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms