RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 KLK13Q9UKR3 277 aa9.15□□□□□ -0.94
COPB1-210ENST00000533533 HCN2Q9UL51 889 aa9.15□□□□□ -0.94
COPB1-210ENST00000533533 STARD13Q9Y3M8 1113 aa9.15□□□□□ -0.94
COPB1-210ENST00000533533 SMG1Q96Q15 3661 aaKnown RBP9.15□□□□□ -0.94
COPB1-210ENST00000533533 ADAMTS20P59510 1910 aa9.15□□□□□ -0.95
COPB1-210ENST00000533533 PTPRBP23467 1997 aa9.14□□□□□ -0.95
COPB1-210ENST00000533533 IGHV1OR15-9A0A0B4J2B8 117 aa9.14□□□□□ -0.95
COPB1-210ENST00000533533 FAM92AA1XBS5 289 aa9.14□□□□□ -0.95
COPB1-210ENST00000533533 FAM221BA6H8Z2 402 aa9.14□□□□□ -0.95
COPB1-210ENST00000533533 SMTNL1A8MU46 457 aa9.14□□□□□ -0.95
COPB1-210ENST00000533533 ARHGAP33O14559 1287 aa9.14□□□□□ -0.95
COPB1-210ENST00000533533 TRIM24O15164 1050 aa9.14□□□□□ -0.95
COPB1-210ENST00000533533 PMM2O15305 246 aa9.14□□□□□ -0.95
COPB1-210ENST00000533533 ZBTB24O43167 697 aaPredicted RBP9.14□□□□□ -0.95
COPB1-210ENST00000533533 ZNF217O75362 1048 aa9.14□□□□□ -0.95
COPB1-210ENST00000533533 RDXP35241 583 aaKnown RBP9.14□□□□□ -0.95
COPB1-210ENST00000533533 WASP42768 502 aa9.14□□□□□ -0.95
COPB1-210ENST00000533533 RAD23BP54727 409 aa9.14□□□□□ -0.95
COPB1-210ENST00000533533 MFAP3P55082 362 aa9.14□□□□□ -0.95
COPB1-210ENST00000533533 SLC8A3P57103 927 aa9.14□□□□□ -0.95
COPB1-210ENST00000533533 FAM193AP78312 1265 aa9.14□□□□□ -0.95
COPB1-210ENST00000533533 RING1Q06587 406 aa9.14□□□□□ -0.95
COPB1-210ENST00000533533 KRT31Q15323 416 aa9.14□□□□□ -0.95
COPB1-210ENST00000533533 SGO2Q562F6 1265 aa9.14□□□□□ -0.95
COPB1-210ENST00000533533 PPP1R26Q5T8A7 1209 aaPredicted RBP9.14□□□□□ -0.95
COPB1-210ENST00000533533 GJB7Q6PEY0 223 aa9.14□□□□□ -0.95
COPB1-210ENST00000533533 LRSAM1Q6UWE0 723 aa9.14□□□□□ -0.95
COPB1-210ENST00000533533 PAQR9Q6ZVX9 377 aa9.14□□□□□ -0.95
COPB1-210ENST00000533533 SLC41A1Q8IVJ1 513 aa9.14□□□□□ -0.95
COPB1-210ENST00000533533 MINDY1Q8N5J2 469 aa9.14□□□□□ -0.95
COPB1-210ENST00000533533 SLC4A11Q8NBS3 891 aa9.14□□□□□ -0.95
COPB1-210ENST00000533533 LMO3Q8TAP4 145 aa9.14□□□□□ -0.95
COPB1-210ENST00000533533 WBP2Q969T9 261 aa9.14□□□□□ -0.95
COPB1-210ENST00000533533 NACA2Q9H009 215 aa9.14□□□□□ -0.95
COPB1-210ENST00000533533 COMMD8Q9NX08 183 aa9.14□□□□□ -0.95
COPB1-210ENST00000533533 GMIPQ9P107 970 aa9.14□□□□□ -0.95
COPB1-210ENST00000533533 CACNG3O60359 315 aa9.13□□□□□ -0.95
COPB1-210ENST00000533533 GREM1O60565 184 aa9.13□□□□□ -0.95
COPB1-210ENST00000533533 TLR5O60602 858 aa9.13□□□□□ -0.95
COPB1-210ENST00000533533 BEST1O76090 585 aa9.13□□□□□ -0.95
COPB1-210ENST00000533533 CALCAP01258 141 aa9.13□□□□□ -0.95
COPB1-210ENST00000533533 SYPP08247 313 aa9.13□□□□□ -0.95
COPB1-210ENST00000533533 IRF1P10914 325 aa9.13□□□□□ -0.95
COPB1-210ENST00000533533 CD59P13987 128 aa9.13□□□□□ -0.95
COPB1-210ENST00000533533 NDUFV2P19404 249 aa9.13□□□□□ -0.95
COPB1-210ENST00000533533 PON1P27169 355 aa9.13□□□□□ -0.95
COPB1-210ENST00000533533 ZNF165P49910 485 aa9.13□□□□□ -0.95
COPB1-210ENST00000533533 APBA1Q02410 837 aa9.13□□□□□ -0.95
COPB1-210ENST00000533533 GCNT1Q02742 428 aa9.13□□□□□ -0.95
COPB1-210ENST00000533533 SLC14A1Q13336 389 aa9.13□□□□□ -0.95
COPB1-210ENST00000533533 HNRNPDQ14103 355 aaKnown RBP9.13□□□□□ -0.95
COPB1-210ENST00000533533 NFKBIBQ15653 356 aa9.13□□□□□ -0.95
COPB1-210ENST00000533533 ZNF423Q2M1K9 1284 aa9.13□□□□□ -0.95
COPB1-210ENST00000533533 GOLGA7BQ2TAP0 167 aa9.13□□□□□ -0.95
COPB1-210ENST00000533533 ZSCAN23Q3MJ62 389 aa9.13□□□□□ -0.95
COPB1-210ENST00000533533 FKBP15Q5T1M5 1219 aa9.13□□□□□ -0.95
COPB1-210ENST00000533533 EGFLAMQ63HQ2 1017 aa9.13□□□□□ -0.95
COPB1-210ENST00000533533 GRAMD4Q6IC98 578 aa9.13□□□□□ -0.95
COPB1-210ENST00000533533 SDE2Q6IQ49 451 aa9.13□□□□□ -0.95
COPB1-210ENST00000533533 TRIM65Q6PJ69 517 aa9.13□□□□□ -0.95
COPB1-210ENST00000533533 HTR3DQ70Z44 454 aa9.13□□□□□ -0.95
COPB1-210ENST00000533533 CHPFQ8IZ52 775 aa9.13□□□□□ -0.95
COPB1-210ENST00000533533 CHCHD4Q8N4Q1 142 aa9.13□□□□□ -0.95
COPB1-210ENST00000533533 RBBP8NLQ8NC74 664 aaPredicted RBP9.13□□□□□ -0.95
COPB1-210ENST00000533533 OR2I1PQ8NGU4 316 aa9.13□□□□□ -0.95
COPB1-210ENST00000533533 IPO4Q8TEX9 1081 aaKnown RBP9.13□□□□□ -0.95
COPB1-210ENST00000533533 ACOX2Q99424 681 aa9.13□□□□□ -0.95
COPB1-210ENST00000533533 HNRNPABQ99729 332 aaKnown RBP9.13□□□□□ -0.95
COPB1-210ENST00000533533 SMOQ99835 787 aa9.13□□□□□ -0.95
COPB1-210ENST00000533533 CD248Q9HCU0 757 aa9.13□□□□□ -0.95
COPB1-210ENST00000533533 DNAJC17Q9NVM6 304 aaKnown RBP9.13□□□□□ -0.95
COPB1-210ENST00000533533 DNAAF2Q9NVR5 837 aaKnown RBP9.13□□□□□ -0.95
COPB1-210ENST00000533533 HESX1Q9UBX0 185 aa9.13□□□□□ -0.95
COPB1-210ENST00000533533 APEX2Q9UBZ4 518 aa9.13□□□□□ -0.95
COPB1-210ENST00000533533 CYP8B1Q9UNU6 501 aa9.13□□□□□ -0.95
COPB1-210ENST00000533533 LHX6Q9UPM6 363 aa9.13□□□□□ -0.95
COPB1-210ENST00000533533 CKAP5Q14008 2032 aa9.13□□□□□ -0.95
COPB1-210ENST00000533533 SETXQ7Z333 2677 aaKnown RBP9.13□□□□□ -0.95
COPB1-210ENST00000533533 BPTFQ12830 3046 aa9.12□□□□□ -0.95
COPB1-210ENST00000533533 GTPBP10A4D1E9 387 aaKnown RBP9.12□□□□□ -0.95
COPB1-210ENST00000533533 PRRT4C9JH25 899 aa9.12□□□□□ -0.95
COPB1-210ENST00000533533 NEDD8-MDP1E9PL57 170 aa9.12□□□□□ -0.95
COPB1-210ENST00000533533 RNF225M0QZC1 329 aaPredicted RBP9.12□□□□□ -0.95
COPB1-210ENST00000533533 TAF4O00268 1085 aa9.12□□□□□ -0.95
COPB1-210ENST00000533533 GJB3O75712 270 aa9.12□□□□□ -0.95
COPB1-210ENST00000533533 TBX18O95935 607 aa9.12□□□□□ -0.95
COPB1-210ENST00000533533 VDRP11473 427 aa9.12□□□□□ -0.95
COPB1-210ENST00000533533 TYRP14679 529 aa9.12□□□□□ -0.95
COPB1-210ENST00000533533 ACO1P21399 889 aaKnown RBP9.12□□□□□ -0.95
COPB1-210ENST00000533533 BRD2P25440 801 aaKnown RBP9.12□□□□□ -0.95
COPB1-210ENST00000533533 PGFP49763 221 aa9.12□□□□□ -0.95
COPB1-210ENST00000533533 COPB1P53618 953 aaKnown RBP9.12□□□□□ -0.95
COPB1-210ENST00000533533 TPM4P67936 248 aa9.12□□□□□ -0.95
COPB1-210ENST00000533533 RAPGEF1Q13905 1077 aa9.12□□□□□ -0.95
COPB1-210ENST00000533533 TRIP6Q15654 476 aaKnown RBP9.12□□□□□ -0.95
COPB1-210ENST00000533533 MIIPQ5JXC2 388 aa9.12□□□□□ -0.95
COPB1-210ENST00000533533 CDKAL1Q5VV42 579 aa9.12□□□□□ -0.95
COPB1-210ENST00000533533 TPGS1Q6ZTW0 290 aa9.12□□□□□ -0.95
COPB1-210ENST00000533533 CLEC20AQ6ZU45 233 aa9.12□□□□□ -0.95
COPB1-210ENST00000533533 RAB44Q7Z6P3 723 aaPredicted RBP9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms