RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-222ENST00000531967 UBA6A0AVT1 1052 aaPredicted RBP5.47□□□□□ -1.53
ECHDC1-222ENST00000531967 FRMD3A2A2Y4 597 aa5.47□□□□□ -1.53
ECHDC1-222ENST00000531967 H0Y858 1186 aa5.47□□□□□ -1.53
ECHDC1-222ENST00000531967 CTDSP2O14595 271 aa5.47□□□□□ -1.53
ECHDC1-222ENST00000531967 GABBR2O75899 941 aa5.47□□□□□ -1.53
ECHDC1-222ENST00000531967 RECQL4O94761 1208 aa5.47□□□□□ -1.53
ECHDC1-222ENST00000531967 ALDH1A2O94788 518 aa5.47□□□□□ -1.53
ECHDC1-222ENST00000531967 PRAMEF1O95521 474 aa5.47□□□□□ -1.53
ECHDC1-222ENST00000531967 PRAMEF12O95522 483 aa5.47□□□□□ -1.53
ECHDC1-222ENST00000531967 YEATS4O95619 227 aa5.47□□□□□ -1.53
ECHDC1-222ENST00000531967 ABHD16AO95870 558 aa5.47□□□□□ -1.53
ECHDC1-222ENST00000531967 F11P03951 625 aa5.47□□□□□ -1.53
ECHDC1-222ENST00000531967 MCM3P25205 808 aa5.47□□□□□ -1.53
ECHDC1-222ENST00000531967 KLRC1P26715 233 aa5.47□□□□□ -1.53
ECHDC1-222ENST00000531967 SERPINA4P29622 427 aa5.47□□□□□ -1.53
ECHDC1-222ENST00000531967 SDHAP31040 664 aa5.47□□□□□ -1.53
ECHDC1-222ENST00000531967 BCL6P41182 706 aa5.47□□□□□ -1.53
ECHDC1-222ENST00000531967 MRPL12P52815 198 aaKnown RBP5.47□□□□□ -1.53
ECHDC1-222ENST00000531967 CDH8P55286 799 aa5.47□□□□□ -1.53
ECHDC1-222ENST00000531967 HAND2P61296 217 aa5.47□□□□□ -1.53
ECHDC1-222ENST00000531967 IKQ13123 557 aaPredicted RBP5.47□□□□□ -1.53
ECHDC1-222ENST00000531967 TARDBPQ13148 414 aaKnown RBP eCLIP5.47□□□□□ -1.53
ECHDC1-222ENST00000531967 CTBP1Q13363 440 aa5.47□□□□□ -1.53
ECHDC1-222ENST00000531967 SNTB1Q13884 538 aaKnown RBP5.47□□□□□ -1.53
ECHDC1-222ENST00000531967 CLCA4Q14CN2 919 aa5.47□□□□□ -1.53
ECHDC1-222ENST00000531967 CLPPQ16740 277 aaPredicted RBP5.47□□□□□ -1.53
ECHDC1-222ENST00000531967 INSCQ1MX18 579 aa5.47□□□□□ -1.53
ECHDC1-222ENST00000531967 SLC5A9Q2M3M2 681 aa5.47□□□□□ -1.53
ECHDC1-222ENST00000531967 TRIM60Q495X7 471 aa5.47□□□□□ -1.53
ECHDC1-222ENST00000531967 AARDQ4LEZ3 155 aa5.47□□□□□ -1.53
ECHDC1-222ENST00000531967 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.47□□□□□ -1.53
ECHDC1-222ENST00000531967 RCSD1Q6JBY9 416 aa5.47□□□□□ -1.53
ECHDC1-222ENST00000531967 TTI2Q6NXR4 508 aa5.47□□□□□ -1.53
ECHDC1-222ENST00000531967 CLEC2AQ6UVW9 174 aa5.47□□□□□ -1.53
ECHDC1-222ENST00000531967 B3GNT6Q6ZMB0 384 aa5.47□□□□□ -1.53
ECHDC1-222ENST00000531967 ARMCX2Q7L311 632 aa5.47□□□□□ -1.53
ECHDC1-222ENST00000531967 ARMC9Q7Z3E5 817 aa5.47□□□□□ -1.53
ECHDC1-222ENST00000531967 HOOK3Q86VS8 718 aa5.47□□□□□ -1.53
ECHDC1-222ENST00000531967 ARL14Q8N4G2 192 aa5.47□□□□□ -1.53
ECHDC1-222ENST00000531967 EDC3Q96F86 508 aaKnown RBP5.47□□□□□ -1.53
ECHDC1-222ENST00000531967 C8orf76Q96K31 380 aa5.47□□□□□ -1.53
ECHDC1-222ENST00000531967 HEMGNQ9BXL5 484 aa5.47□□□□□ -1.53
ECHDC1-222ENST00000531967 NFKBIZQ9BYH8 718 aa5.47□□□□□ -1.53
ECHDC1-222ENST00000531967 PUS3Q9BZE2 481 aaKnown RBP5.47□□□□□ -1.53
ECHDC1-222ENST00000531967 EHD2Q9NZN4 543 aa5.47□□□□□ -1.53
ECHDC1-222ENST00000531967 CNIH4Q9P003 139 aa5.47□□□□□ -1.53
ECHDC1-222ENST00000531967 SLC25A10Q9UBX3 287 aaPredicted RBP5.47□□□□□ -1.53
ECHDC1-222ENST00000531967 MID2Q9UJV3 735 aa5.47□□□□□ -1.53
ECHDC1-222ENST00000531967 AGO2Q9UKV8 859 aaKnown RBP5.47□□□□□ -1.53
ECHDC1-222ENST00000531967 CA14Q9ULX7 337 aa5.47□□□□□ -1.53
ECHDC1-222ENST00000531967 KCNK7Q9Y2U2 307 aa5.47□□□□□ -1.53
ECHDC1-222ENST00000531967 PTRH2Q9Y3E5 179 aaKnown RBP5.47□□□□□ -1.53
ECHDC1-222ENST00000531967 DDX49Q9Y6V7 483 aaKnown RBP5.47□□□□□ -1.53
ECHDC1-222ENST00000531967 XKRY2A2RUG3 117 aa5.46□□□□□ -1.54
ECHDC1-222ENST00000531967 FAM90A18PA6NE21 464 aa5.46□□□□□ -1.54
ECHDC1-222ENST00000531967 FAM90A16PA6NEW6 464 aa5.46□□□□□ -1.54
ECHDC1-222ENST00000531967 FAM90A9PA6NNJ1 464 aa5.46□□□□□ -1.54
ECHDC1-222ENST00000531967 FAM90A5PA8MXJ8 464 aa5.46□□□□□ -1.54
ECHDC1-222ENST00000531967 ZC3H11AO75152 810 aaKnown RBP eCLIP5.46□□□□□ -1.54
ECHDC1-222ENST00000531967 FAM90A15PP0C7V4 464 aa5.46□□□□□ -1.54
ECHDC1-222ENST00000531967 FAM90A14PP0C7W9 464 aa5.46□□□□□ -1.54
ECHDC1-222ENST00000531967 NCF1P14598 390 aaPredicted RBP5.46□□□□□ -1.54
ECHDC1-222ENST00000531967 CASTP20810 708 aaKnown RBP5.46□□□□□ -1.54
ECHDC1-222ENST00000531967 PRKCIP41743 596 aa5.46□□□□□ -1.54
ECHDC1-222ENST00000531967 KCNJ4P48050 445 aa5.46□□□□□ -1.54
ECHDC1-222ENST00000531967 ARL4DP49703 201 aa5.46□□□□□ -1.54
ECHDC1-222ENST00000531967 VPS41P49754 854 aa5.46□□□□□ -1.54
ECHDC1-222ENST00000531967 GTF2A1P52655 376 aaPredicted RBP5.46□□□□□ -1.54
ECHDC1-222ENST00000531967 HADHBP55084 474 aaKnown RBP5.46□□□□□ -1.54
ECHDC1-222ENST00000531967 ADARP55265 1226 aaKnown RBP5.46□□□□□ -1.54
ECHDC1-222ENST00000531967 TEFQ10587 303 aa5.46□□□□□ -1.54
ECHDC1-222ENST00000531967 PDCLQ13371 301 aa5.46□□□□□ -1.54
ECHDC1-222ENST00000531967 RAB32Q13637 225 aa5.46□□□□□ -1.54
ECHDC1-222ENST00000531967 HYAL4Q2M3T9 481 aa5.46□□□□□ -1.54
ECHDC1-222ENST00000531967 CRY2Q49AN0 593 aa5.46□□□□□ -1.54
ECHDC1-222ENST00000531967 ZNF484Q5JVG2 852 aa5.46□□□□□ -1.54
ECHDC1-222ENST00000531967 EEF1DP3Q658K8 133 aa5.46□□□□□ -1.54
ECHDC1-222ENST00000531967 ILDR2Q71H61 639 aa5.46□□□□□ -1.54
ECHDC1-222ENST00000531967 CENPQQ7L2Z9 268 aaPredicted RBP5.46□□□□□ -1.54
ECHDC1-222ENST00000531967 MIER3Q7Z3K6 550 aa5.46□□□□□ -1.54
ECHDC1-222ENST00000531967 FAM35AQ86V20 835 aa5.46□□□□□ -1.54
ECHDC1-222ENST00000531967 MIB1Q86YT6 1006 aa5.46□□□□□ -1.54
ECHDC1-222ENST00000531967 P3H2Q8IVL5 708 aa5.46□□□□□ -1.54
ECHDC1-222ENST00000531967 BANPQ8N9N5 519 aa5.46□□□□□ -1.54
ECHDC1-222ENST00000531967 ZCCHC10Q8TBK6 192 aa5.46□□□□□ -1.54
ECHDC1-222ENST00000531967 CPT1BQ92523 772 aa5.46□□□□□ -1.54
ECHDC1-222ENST00000531967 ALG14Q96F25 216 aa5.46□□□□□ -1.54
ECHDC1-222ENST00000531967 TUBGCP5Q96RT8 1024 aa5.46□□□□□ -1.54
ECHDC1-222ENST00000531967 TUBA1CQ9BQE3 449 aa5.46□□□□□ -1.54
ECHDC1-222ENST00000531967 FOXQ1Q9C009 403 aa5.46□□□□□ -1.54
ECHDC1-222ENST00000531967 TTYH1Q9H313 450 aaPredicted RBP5.46□□□□□ -1.54
ECHDC1-222ENST00000531967 WDR26Q9H7D7 661 aa5.46□□□□□ -1.54
ECHDC1-222ENST00000531967 RPRD1BQ9NQG5 326 aaKnown RBP5.46□□□□□ -1.54
ECHDC1-222ENST00000531967 RBM12Q9NTZ6 932 aaKnown RBP5.46□□□□□ -1.54
ECHDC1-222ENST00000531967 GDAP2Q9NXN4 497 aa5.46□□□□□ -1.54
ECHDC1-222ENST00000531967 SH3BP4Q9P0V3 963 aa5.46□□□□□ -1.54
ECHDC1-222ENST00000531967 ANAPC2Q9UJX6 822 aa5.46□□□□□ -1.54
ECHDC1-222ENST00000531967 CLEC4AQ9UMR7 237 aa5.46□□□□□ -1.54
ECHDC1-222ENST00000531967 TRBC2A0A5B9 178 aa5.46□□□□□ -1.54
ECHDC1-222ENST00000531967 MBD3L4A6NDZ8 208 aaPredicted RBP5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms