RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 CYP1A1P04798 512 aaPredicted RBP12.71□□□□□ -0.37
SCN3B-206ENST00000530277 GMPRP36959 345 aa12.71□□□□□ -0.37
SCN3B-206ENST00000530277 NDUFV1P49821 464 aa12.71□□□□□ -0.37
SCN3B-206ENST00000530277 COPAP53621 1224 aa12.71□□□□□ -0.37
SCN3B-206ENST00000530277 PDK4Q16654 411 aa12.71□□□□□ -0.37
SCN3B-206ENST00000530277 SLC27A1Q6PCB7 646 aa12.71□□□□□ -0.37
SCN3B-206ENST00000530277 IZUMO2Q6UXV1 221 aa12.71□□□□□ -0.37
SCN3B-206ENST00000530277 TAS2R42Q7RTR8 314 aa12.71□□□□□ -0.37
SCN3B-206ENST00000530277 SCUBE1Q8IWY4 988 aa12.71□□□□□ -0.37
SCN3B-206ENST00000530277 TRIML2Q8N7C3 387 aa12.71□□□□□ -0.37
SCN3B-206ENST00000530277 CATSPER2Q96P56 530 aa12.71□□□□□ -0.37
SCN3B-206ENST00000530277 NMUR2Q9GZQ4 415 aa12.71□□□□□ -0.37
SCN3B-206ENST00000530277 ASB7Q9H672 318 aa12.71□□□□□ -0.37
SCN3B-206ENST00000530277 VANGL2Q9ULK5 521 aa12.71□□□□□ -0.37
SCN3B-206ENST00000530277 MPP3Q13368 585 aa12.71□□□□□ -0.37
SCN3B-206ENST00000530277 ZNF235Q14590 738 aa12.71□□□□□ -0.37
SCN3B-206ENST00000530277 RAB44Q7Z6P3 723 aaPredicted RBP12.71□□□□□ -0.37
SCN3B-206ENST00000530277 SLC4A11Q8NBS3 891 aa12.71□□□□□ -0.37
SCN3B-206ENST00000530277 NTPCRQ9BSD7 190 aaKnown RBP12.71□□□□□ -0.37
SCN3B-206ENST00000530277 FICDQ9BVA6 458 aa12.71□□□□□ -0.37
SCN3B-206ENST00000530277 CYP3A43Q9HB55 503 aa12.71□□□□□ -0.37
SCN3B-206ENST00000530277 TNFSF13BQ9Y275 285 aa12.71□□□□□ -0.37
SCN3B-206ENST00000530277 CACNA1SQ13698 1873 aa12.71□□□□□ -0.37
SCN3B-206ENST00000530277 SCNN1GP51170 649 aa12.71□□□□□ -0.38
SCN3B-206ENST00000530277 TTC39CQ8N584 583 aa12.71□□□□□ -0.38
SCN3B-206ENST00000530277 DDX1Q92499 740 aaKnown RBP12.71□□□□□ -0.38
SCN3B-206ENST00000530277 CENPTQ96BT3 561 aa12.71□□□□□ -0.38
SCN3B-206ENST00000530277 GMLQ99445 158 aa12.71□□□□□ -0.38
SCN3B-206ENST00000530277 ACSS3Q9H6R3 686 aa12.71□□□□□ -0.38
SCN3B-206ENST00000530277 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.71□□□□□ -0.38
SCN3B-206ENST00000530277 SYNPO2Q9UMS6 1093 aa12.71□□□□□ -0.38
SCN3B-206ENST00000530277 AK5Q9Y6K8 562 aa12.71□□□□□ -0.38
SCN3B-206ENST00000530277 MYO7AQ13402 2215 aa12.71□□□□□ -0.38
SCN3B-206ENST00000530277 C4AP0C0L4 1744 aa12.71□□□□□ -0.38
SCN3B-206ENST00000530277 C4BP0C0L5 1744 aa12.71□□□□□ -0.38
SCN3B-206ENST00000530277 A0A096LPK6 155 aa12.71□□□□□ -0.38
SCN3B-206ENST00000530277 CASQ2O14958 399 aaPredicted RBP12.71□□□□□ -0.38
SCN3B-206ENST00000530277 KIF1CO43896 1103 aaKnown RBP12.71□□□□□ -0.38
SCN3B-206ENST00000530277 EDF1O60869 148 aaKnown RBP12.71□□□□□ -0.38
SCN3B-206ENST00000530277 USP1O94782 785 aa12.71□□□□□ -0.38
SCN3B-206ENST00000530277 LMNAP02545 664 aaKnown RBP12.71□□□□□ -0.38
SCN3B-206ENST00000530277 ITGAVP06756 1048 aa12.71□□□□□ -0.38
SCN3B-206ENST00000530277 NOVP48745 357 aa12.71□□□□□ -0.38
SCN3B-206ENST00000530277 NAGLUP54802 743 aa12.71□□□□□ -0.38
SCN3B-206ENST00000530277 EFEMP1Q12805 493 aa12.71□□□□□ -0.38
SCN3B-206ENST00000530277 CNGA3Q16281 694 aa12.71□□□□□ -0.38
SCN3B-206ENST00000530277 SLC10A6Q3KNW5 377 aa12.71□□□□□ -0.38
SCN3B-206ENST00000530277 CRELD2Q6UXH1 353 aaPredicted RBP12.71□□□□□ -0.38
SCN3B-206ENST00000530277 YTHDF3Q7Z739 585 aaKnown RBP12.71□□□□□ -0.38
SCN3B-206ENST00000530277 FGD4Q96M96 766 aa12.71□□□□□ -0.38
SCN3B-206ENST00000530277 SERPINI1Q99574 410 aa12.71□□□□□ -0.38
SCN3B-206ENST00000530277 SYT15Q9BQS2 421 aa12.71□□□□□ -0.38
SCN3B-206ENST00000530277 PCDH18Q9HCL0 1135 aa12.71□□□□□ -0.38
SCN3B-206ENST00000530277 MAFBQ9Y5Q3 323 aaPredicted RBP12.71□□□□□ -0.38
SCN3B-206ENST00000530277 KIF3CO14782 793 aa12.7□□□□□ -0.38
SCN3B-206ENST00000530277 MSCO60682 206 aa12.7□□□□□ -0.38
SCN3B-206ENST00000530277 TADA2AO75478 443 aa12.7□□□□□ -0.38
SCN3B-206ENST00000530277 SPAG6O75602 509 aa12.7□□□□□ -0.38
SCN3B-206ENST00000530277 YBX3P16989 372 aaKnown RBP eCLIP12.7□□□□□ -0.38
SCN3B-206ENST00000530277 PAMP19021 973 aa12.7□□□□□ -0.38
SCN3B-206ENST00000530277 SERPINB9P50453 376 aa12.7□□□□□ -0.38
SCN3B-206ENST00000530277 PGGT1BP53609 377 aa12.7□□□□□ -0.38
SCN3B-206ENST00000530277 IYDQ6PHW0 289 aa12.7□□□□□ -0.38
SCN3B-206ENST00000530277 ZSCAN18Q8TBC5 510 aaPredicted RBP12.7□□□□□ -0.38
SCN3B-206ENST00000530277 TKTL2Q9H0I9 626 aa12.7□□□□□ -0.38
SCN3B-206ENST00000530277 NT5MQ9NPB1 228 aa12.7□□□□□ -0.38
SCN3B-206ENST00000530277 COL4A1P02462 1669 aa12.7□□□□□ -0.38
SCN3B-206ENST00000530277 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.7□□□□□ -0.38
SCN3B-206ENST00000530277 CCL22O00626 93 aa12.7□□□□□ -0.38
SCN3B-206ENST00000530277 PLA2G6O60733 806 aa12.7□□□□□ -0.38
SCN3B-206ENST00000530277 DNAJC8O75937 253 aaPredicted RBP12.7□□□□□ -0.38
SCN3B-206ENST00000530277 PAEPP09466 180 aa12.7□□□□□ -0.38
SCN3B-206ENST00000530277 SLC1A6P48664 564 aa12.7□□□□□ -0.38
SCN3B-206ENST00000530277 MAXP61244 160 aa12.7□□□□□ -0.38
SCN3B-206ENST00000530277 ACVR2BQ13705 512 aa12.7□□□□□ -0.38
SCN3B-206ENST00000530277 SGO1Q5FBB7 561 aa12.7□□□□□ -0.38
SCN3B-206ENST00000530277 RNASEH2BQ5TBB1 312 aaKnown RBP12.7□□□□□ -0.38
SCN3B-206ENST00000530277 TLK2Q86UE8 772 aa12.7□□□□□ -0.38
SCN3B-206ENST00000530277 GPC2Q8N158 579 aa12.7□□□□□ -0.38
SCN3B-206ENST00000530277 PLD5Q8N7P1 536 aa12.7□□□□□ -0.38
SCN3B-206ENST00000530277 RPRD1AQ96P16 312 aaPredicted RBP12.7□□□□□ -0.38
SCN3B-206ENST00000530277 R3HDMLQ9H3Y0 253 aa12.7□□□□□ -0.38
SCN3B-206ENST00000530277 RBM22Q9NW64 420 aaKnown RBP eCLIP12.7□□□□□ -0.38
SCN3B-206ENST00000530277 ITGA11Q9UKX5 1188 aa12.7□□□□□ -0.38
SCN3B-206ENST00000530277 ATP6AP2A0A1C7CYW4 349 aa12.7□□□□□ -0.38
SCN3B-206ENST00000530277 NOL3O60936 208 aaKnown RBP12.7□□□□□ -0.38
SCN3B-206ENST00000530277 ATP6AP2O75787 350 aa12.7□□□□□ -0.38
SCN3B-206ENST00000530277 THP07101 528 aa12.7□□□□□ -0.38
SCN3B-206ENST00000530277 UNC5AQ6ZN44 842 aa12.7□□□□□ -0.38
SCN3B-206ENST00000530277 PLEKHH3Q7Z736 793 aa12.7□□□□□ -0.38
SCN3B-206ENST00000530277 SNX31Q8N9S9 440 aa12.7□□□□□ -0.38
SCN3B-206ENST00000530277 DIS3LQ8TF46 1054 aaKnown RBP12.7□□□□□ -0.38
SCN3B-206ENST00000530277 SERAC1Q96JX3 654 aa12.7□□□□□ -0.38
SCN3B-206ENST00000530277 ST6GALNAC4Q9H4F1 302 aa12.7□□□□□ -0.38
SCN3B-206ENST00000530277 ZNF358Q9NW07 568 aa12.7□□□□□ -0.38
SCN3B-206ENST00000530277 BCAP29Q9UHQ4 241 aa12.7□□□□□ -0.38
SCN3B-206ENST00000530277 COL18A1P39060 1754 aa12.7□□□□□ -0.38
SCN3B-206ENST00000530277 NFASCO94856 1347 aa12.69□□□□□ -0.38
SCN3B-206ENST00000530277 CRYBG1Q9Y4K1 1723 aa12.69□□□□□ -0.38
SCN3B-206ENST00000530277 ZBBXA8MT70 800 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms