RNA–Protein interactions for RNA: ENST00000529526.5

CTNND1-220, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-220ENST00000529526 SLC26A2P50443 739 aa8.33□□□□□ -1.08
CTNND1-220ENST00000529526 CCDC15Q0P6D6 951 aa8.33□□□□□ -1.08
CTNND1-220ENST00000529526 NR6A1Q15406 480 aa8.33□□□□□ -1.08
CTNND1-220ENST00000529526 MARC1Q5VT66 337 aa8.33□□□□□ -1.08
CTNND1-220ENST00000529526 SEPHS2Q99611 448 aa8.33□□□□□ -1.08
CTNND1-220ENST00000529526 KRT84Q9NSB2 600 aa8.33□□□□□ -1.08
CTNND1-220ENST00000529526 INTS13Q9NVM9 706 aa8.33□□□□□ -1.08
CTNND1-220ENST00000529526 NCKIPSDQ9NZQ3 722 aa8.33□□□□□ -1.08
CTNND1-220ENST00000529526 A0A0U1RQJ8 604 aa8.33□□□□□ -1.08
CTNND1-220ENST00000529526 FGFR1P11362 822 aa8.33□□□□□ -1.08
CTNND1-220ENST00000529526 ETS1P14921 441 aa8.33□□□□□ -1.08
CTNND1-220ENST00000529526 ADORA2AP29274 412 aa8.33□□□□□ -1.08
CTNND1-220ENST00000529526 DEFA1P59665 94 aa8.33□□□□□ -1.08
CTNND1-220ENST00000529526 DEFA3P59666 94 aa8.33□□□□□ -1.08
CTNND1-220ENST00000529526 OASLQ15646 514 aaKnown RBP8.33□□□□□ -1.08
CTNND1-220ENST00000529526 PKN2Q16513 984 aaKnown RBP8.33□□□□□ -1.08
CTNND1-220ENST00000529526 CEP78Q5JTW2 689 aa8.33□□□□□ -1.08
CTNND1-220ENST00000529526 GRTP1Q5TC63 336 aa8.33□□□□□ -1.08
CTNND1-220ENST00000529526 FAM171A1Q5VUB5 890 aa8.33□□□□□ -1.08
CTNND1-220ENST00000529526 VN1R5Q7Z5H4 357 aa8.33□□□□□ -1.08
CTNND1-220ENST00000529526 APBA2Q99767 749 aa8.33□□□□□ -1.08
CTNND1-220ENST00000529526 TBL1YQ9BQ87 522 aa8.33□□□□□ -1.08
CTNND1-220ENST00000529526 NFKBIZQ9BYH8 718 aa8.33□□□□□ -1.08
CTNND1-220ENST00000529526 RHBDL2Q9NX52 303 aa8.33□□□□□ -1.08
CTNND1-220ENST00000529526 PQBP1O60828 265 aaKnown RBP8.32□□□□□ -1.08
CTNND1-220ENST00000529526 PCDH8O95206 1070 aa8.32□□□□□ -1.08
CTNND1-220ENST00000529526 HMGCRP04035 888 aa8.32□□□□□ -1.08
CTNND1-220ENST00000529526 ZSCAN5DPP0CG00 497 aa8.32□□□□□ -1.08
CTNND1-220ENST00000529526 MAPTP10636 758 aaKnown RBP8.32□□□□□ -1.08
CTNND1-220ENST00000529526 PGAM1P18669 254 aa8.32□□□□□ -1.08
CTNND1-220ENST00000529526 PEX5P50542 639 aa8.32□□□□□ -1.08
CTNND1-220ENST00000529526 ERVK-9P63128 1117 aa8.32□□□□□ -1.08
CTNND1-220ENST00000529526 NPNTQ6UXI9 565 aa8.32□□□□□ -1.08
CTNND1-220ENST00000529526 TMC3Q7Z5M5 1100 aa8.32□□□□□ -1.08
CTNND1-220ENST00000529526 TRIM69Q86WT6 500 aa8.32□□□□□ -1.08
CTNND1-220ENST00000529526 CCDC103Q8IW40 242 aa8.32□□□□□ -1.08
CTNND1-220ENST00000529526 DEFB106AQ8N104 65 aa8.32□□□□□ -1.08
CTNND1-220ENST00000529526 GLIS3Q8NEA6 775 aa8.32□□□□□ -1.08
CTNND1-220ENST00000529526 MTFMTQ96DP5 389 aaKnown RBP8.32□□□□□ -1.08
CTNND1-220ENST00000529526 VMP1Q96GC9 406 aa8.32□□□□□ -1.08
CTNND1-220ENST00000529526 SERAC1Q96JX3 654 aa8.32□□□□□ -1.08
CTNND1-220ENST00000529526 P2RX7Q99572 595 aaKnown RBP8.32□□□□□ -1.08
CTNND1-220ENST00000529526 TSEN34Q9BSV6 310 aaKnown RBP8.32□□□□□ -1.08
CTNND1-220ENST00000529526 PDGFDQ9GZP0 370 aaPredicted RBP8.32□□□□□ -1.08
CTNND1-220ENST00000529526 ELOVL6Q9H5J4 265 aa8.32□□□□□ -1.08
CTNND1-220ENST00000529526 RRAGCQ9HB90 399 aa8.32□□□□□ -1.08
CTNND1-220ENST00000529526 RXFP1Q9HBX9 757 aa8.32□□□□□ -1.08
CTNND1-220ENST00000529526 ZMYM5Q9UJ78 669 aa8.32□□□□□ -1.08
CTNND1-220ENST00000529526 PCDHA3Q9Y5H8 950 aa8.32□□□□□ -1.08
CTNND1-220ENST00000529526 SALL3Q9BXA9 1300 aa8.32□□□□□ -1.08
CTNND1-220ENST00000529526 WBP4O75554 376 aaKnown RBP8.32□□□□□ -1.08
CTNND1-220ENST00000529526 ATP6V1G2O95670 118 aa8.32□□□□□ -1.08
CTNND1-220ENST00000529526 HSMCR30P0CW71 290 aa8.32□□□□□ -1.08
CTNND1-220ENST00000529526 TPBGLP0DKB5 382 aa8.32□□□□□ -1.08
CTNND1-220ENST00000529526 TCF3P15923 654 aa8.32□□□□□ -1.08
CTNND1-220ENST00000529526 CD151P48509 253 aa8.32□□□□□ -1.08
CTNND1-220ENST00000529526 VAC14Q08AM6 782 aa8.32□□□□□ -1.08
CTNND1-220ENST00000529526 EML3Q32P44 896 aa8.32□□□□□ -1.08
CTNND1-220ENST00000529526 SLC39A12Q504Y0 691 aa8.32□□□□□ -1.08
CTNND1-220ENST00000529526 CACUL1Q86Y37 369 aa8.32□□□□□ -1.08
CTNND1-220ENST00000529526 SAMD3Q8N6K7 520 aa8.32□□□□□ -1.08
CTNND1-220ENST00000529526 PCSK9Q8NBP7 692 aaKnown RBP8.32□□□□□ -1.08
CTNND1-220ENST00000529526 TAS2R14Q9NYV8 317 aa8.32□□□□□ -1.08
CTNND1-220ENST00000529526 SAE1Q9UBE0 346 aaPredicted RBP8.32□□□□□ -1.08
CTNND1-220ENST00000529526 SEPT3Q9UH03 358 aa8.32□□□□□ -1.08
CTNND1-220ENST00000529526 TDRKHQ9Y2W6 561 aaKnown RBP8.32□□□□□ -1.08
CTNND1-220ENST00000529526 WTIPA6NIX2 430 aaPredicted RBP8.32□□□□□ -1.08
CTNND1-220ENST00000529526 KCNK1O00180 336 aa8.32□□□□□ -1.08
CTNND1-220ENST00000529526 HOXA2O43364 376 aa8.32□□□□□ -1.08
CTNND1-220ENST00000529526 PTPN4P29074 926 aa8.32□□□□□ -1.08
CTNND1-220ENST00000529526 SERPINB1P30740 379 aa8.32□□□□□ -1.08
CTNND1-220ENST00000529526 ADCYAP1R1P41586 468 aa8.32□□□□□ -1.08
CTNND1-220ENST00000529526 KCTD19Q17RG1 926 aaPredicted RBP8.32□□□□□ -1.08
CTNND1-220ENST00000529526 SMARCD1Q96GM5 515 aa8.32□□□□□ -1.08
CTNND1-220ENST00000529526 KIAA1683Q9H0B3 1180 aa8.32□□□□□ -1.08
CTNND1-220ENST00000529526 ACTR8Q9H981 624 aa8.32□□□□□ -1.08
CTNND1-220ENST00000529526 RGS18Q9NS28 235 aa8.32□□□□□ -1.08
CTNND1-220ENST00000529526 BLOC1S4Q9NUP1 217 aa8.32□□□□□ -1.08
CTNND1-220ENST00000529526 PCDHB5Q9Y5E4 795 aa8.32□□□□□ -1.08
CTNND1-220ENST00000529526 SALL1Q9NSC2 1324 aa8.32□□□□□ -1.08
CTNND1-220ENST00000529526 RNASEH1O60930 286 aaKnown RBP8.32□□□□□ -1.08
CTNND1-220ENST00000529526 USP12O75317 370 aa8.32□□□□□ -1.08
CTNND1-220ENST00000529526 SH3BGRLO75368 114 aa8.32□□□□□ -1.08
CTNND1-220ENST00000529526 MSH3P20585 1137 aa8.32□□□□□ -1.08
CTNND1-220ENST00000529526 GSSP48637 474 aa8.32□□□□□ -1.08
CTNND1-220ENST00000529526 NCKAP1LP55160 1127 aa8.32□□□□□ -1.08
CTNND1-220ENST00000529526 PRKCQQ04759 706 aa8.32□□□□□ -1.08
CTNND1-220ENST00000529526 ZNF844Q08AG5 666 aa8.32□□□□□ -1.08
CTNND1-220ENST00000529526 TBCELQ5QJ74 424 aa8.32□□□□□ -1.08
CTNND1-220ENST00000529526 SLC27A1Q6PCB7 646 aa8.32□□□□□ -1.08
CTNND1-220ENST00000529526 TRAF7Q6Q0C0 670 aa8.32□□□□□ -1.08
CTNND1-220ENST00000529526 TRMT11Q7Z4G4 463 aaKnown RBP8.32□□□□□ -1.08
CTNND1-220ENST00000529526 TLK2Q86UE8 772 aa8.32□□□□□ -1.08
CTNND1-220ENST00000529526 SLC22A9Q8IVM8 553 aa8.32□□□□□ -1.08
CTNND1-220ENST00000529526 LGI2Q8N0V4 545 aa8.32□□□□□ -1.08
CTNND1-220ENST00000529526 UCMAQ8WVF2 138 aa8.32□□□□□ -1.08
CTNND1-220ENST00000529526 PURBQ96QR8 312 aaKnown RBP8.32□□□□□ -1.08
CTNND1-220ENST00000529526 OSBPL10Q9BXB5 764 aa8.32□□□□□ -1.08
CTNND1-220ENST00000529526 ROGDIQ9GZN7 287 aa8.32□□□□□ -1.08
CTNND1-220ENST00000529526 POMKQ9H5K3 350 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms