RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 CCNJLQ8IV13 435 aa15.26■□□□□ 0.03
ECHDC1-220ENST00000528402 COLGALT2Q8IYK4 626 aa15.26■□□□□ 0.03
ECHDC1-220ENST00000528402 DYDC1Q8WWB3 177 aa15.26■□□□□ 0.03
ECHDC1-220ENST00000528402 SPATA13Q96N96 652 aa15.26■□□□□ 0.03
ECHDC1-220ENST00000528402 EPAS1Q99814 870 aa15.26■□□□□ 0.03
ECHDC1-220ENST00000528402 DHRS4Q9BTZ2 278 aa15.26■□□□□ 0.03
ECHDC1-220ENST00000528402 COLEC11Q9BWP8 271 aa15.26■□□□□ 0.03
ECHDC1-220ENST00000528402 OXCT2Q9BYC2 517 aaPredicted RBP15.26■□□□□ 0.03
ECHDC1-220ENST00000528402 OSBPL2Q9H1P3 480 aa15.26■□□□□ 0.03
ECHDC1-220ENST00000528402 KCNK9Q9NPC2 374 aa15.26■□□□□ 0.03
ECHDC1-220ENST00000528402 ABCC13Q9NSE7 274 aa15.26■□□□□ 0.03
ECHDC1-220ENST00000528402 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.26■□□□□ 0.03
ECHDC1-220ENST00000528402 COL4A4P53420 1690 aaPredicted RBP15.26■□□□□ 0.03
ECHDC1-220ENST00000528402 TCRBV7S3A2A0A539 114 aa15.26■□□□□ 0.03
ECHDC1-220ENST00000528402 POC1B-GALNT4F8VUJ3 575 aa15.26■□□□□ 0.03
ECHDC1-220ENST00000528402 DCLK1O15075 740 aa15.26■□□□□ 0.03
ECHDC1-220ENST00000528402 PARNO95453 639 aaKnown RBP15.26■□□□□ 0.03
ECHDC1-220ENST00000528402 GCAP28676 217 aa15.26■□□□□ 0.03
ECHDC1-220ENST00000528402 SERPINB6P35237 376 aa15.26■□□□□ 0.03
ECHDC1-220ENST00000528402 CDK7P50613 346 aa15.26■□□□□ 0.03
ECHDC1-220ENST00000528402 ZNF33AQ06730 810 aa15.26■□□□□ 0.03
ECHDC1-220ENST00000528402 SMARCB1Q12824 385 aa15.26■□□□□ 0.03
ECHDC1-220ENST00000528402 SEMA3BQ13214 749 aa15.26■□□□□ 0.03
ECHDC1-220ENST00000528402 PRKD1Q15139 912 aaPredicted RBP15.26■□□□□ 0.03
ECHDC1-220ENST00000528402 TMED2Q15363 201 aa15.26■□□□□ 0.03
ECHDC1-220ENST00000528402 PARP6Q2NL67 630 aa15.26■□□□□ 0.03
ECHDC1-220ENST00000528402 LGSNQ5TDP6 509 aa15.26■□□□□ 0.03
ECHDC1-220ENST00000528402 BSPRYQ5W0U4 402 aa15.26■□□□□ 0.03
ECHDC1-220ENST00000528402 VSTM1Q6UX27 236 aa15.26■□□□□ 0.03
ECHDC1-220ENST00000528402 ANKMY2Q8IV38 441 aa15.26■□□□□ 0.03
ECHDC1-220ENST00000528402 ARHGAP18Q8N392 663 aa15.26■□□□□ 0.03
ECHDC1-220ENST00000528402 ZNF317Q96PQ6 595 aaPredicted RBP15.26■□□□□ 0.03
ECHDC1-220ENST00000528402 SMC6Q96SB8 1091 aa15.26■□□□□ 0.03
ECHDC1-220ENST00000528402 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.26■□□□□ 0.03
ECHDC1-220ENST00000528402 DDIT4Q9NX09 232 aa15.26■□□□□ 0.03
ECHDC1-220ENST00000528402 SAGE1Q9NXZ1 904 aa15.26■□□□□ 0.03
ECHDC1-220ENST00000528402 IKBKGQ9Y6K9 419 aa15.26■□□□□ 0.03
ECHDC1-220ENST00000528402 IQANK1A0A1B0GTG1 560 aa15.25■□□□□ 0.03
ECHDC1-220ENST00000528402 FAM47DPA6NHR8 397 aa15.25■□□□□ 0.03
ECHDC1-220ENST00000528402 CREB3O43889 395 aa15.25■□□□□ 0.03
ECHDC1-220ENST00000528402 KRT15P19012 456 aa15.25■□□□□ 0.03
ECHDC1-220ENST00000528402 DRD4P21917 467 aa15.25■□□□□ 0.03
ECHDC1-220ENST00000528402 ELK3P41970 407 aa15.25■□□□□ 0.03
ECHDC1-220ENST00000528402 TPI1P60174 286 aa15.25■□□□□ 0.03
ECHDC1-220ENST00000528402 IL9RQ01113 521 aa15.25■□□□□ 0.03
ECHDC1-220ENST00000528402 MSS51Q4VC12 460 aa15.25■□□□□ 0.03
ECHDC1-220ENST00000528402 ANKRD20A2Q5SQ80 823 aa15.25■□□□□ 0.03
ECHDC1-220ENST00000528402 ANKRD20A1Q5TYW2 823 aa15.25■□□□□ 0.03
ECHDC1-220ENST00000528402 ANKRD20A3Q5VUR7 823 aa15.25■□□□□ 0.03
ECHDC1-220ENST00000528402 FOXR1Q6PIV2 292 aa15.25■□□□□ 0.03
ECHDC1-220ENST00000528402 BHLHA9Q7RTU4 235 aa15.25■□□□□ 0.03
ECHDC1-220ENST00000528402 GPRIN1Q7Z2K8 1008 aa15.25■□□□□ 0.03
ECHDC1-220ENST00000528402 LRRTM3Q86VH5 581 aa15.25■□□□□ 0.03
ECHDC1-220ENST00000528402 SRRM1Q8IYB3 904 aaKnown RBP15.25■□□□□ 0.03
ECHDC1-220ENST00000528402 CYP4X1Q8N118 509 aa15.25■□□□□ 0.03
ECHDC1-220ENST00000528402 PYROXD2Q8N2H3 581 aa15.25■□□□□ 0.03
ECHDC1-220ENST00000528402 ANKS4BQ8N8V4 417 aa15.25■□□□□ 0.03
ECHDC1-220ENST00000528402 OR10T2Q8NGX3 314 aa15.25■□□□□ 0.03
ECHDC1-220ENST00000528402 CCDC110Q8TBZ0 833 aa15.25■□□□□ 0.03
ECHDC1-220ENST00000528402 FBF1Q8TES7 1133 aa15.25■□□□□ 0.03
ECHDC1-220ENST00000528402 SEPT8Q92599 483 aa15.25■□□□□ 0.03
ECHDC1-220ENST00000528402 VAT1Q99536 393 aa15.25■□□□□ 0.03
ECHDC1-220ENST00000528402 ZCWPW1Q9H0M4 648 aa15.25■□□□□ 0.03
ECHDC1-220ENST00000528402 TBK1Q9UHD2 729 aa15.25■□□□□ 0.03
ECHDC1-220ENST00000528402 PCDHB7Q9Y5E2 793 aa15.25■□□□□ 0.03
ECHDC1-220ENST00000528402 PATJQ8NI35 1801 aa15.25■□□□□ 0.03
ECHDC1-220ENST00000528402 OR6C75A6NL08 312 aa15.24■□□□□ 0.03
ECHDC1-220ENST00000528402 I3L4J1 428 aa15.24■□□□□ 0.03
ECHDC1-220ENST00000528402 DNM1LO00429 736 aa15.24■□□□□ 0.03
ECHDC1-220ENST00000528402 PITPNM1O00562 1244 aa15.24■□□□□ 0.03
ECHDC1-220ENST00000528402 TRIM66O15016 1216 aa15.24■□□□□ 0.03
ECHDC1-220ENST00000528402 TADA2AO75478 443 aa15.24■□□□□ 0.03
ECHDC1-220ENST00000528402 DDHD2O94830 711 aa15.24■□□□□ 0.03
ECHDC1-220ENST00000528402 KIAA0754O94854 1291 aa15.24■□□□□ 0.03
ECHDC1-220ENST00000528402 APRTP07741 180 aa15.24■□□□□ 0.03
ECHDC1-220ENST00000528402 ERCC2P18074 760 aa15.24■□□□□ 0.03
ECHDC1-220ENST00000528402 SSTR1P30872 391 aa15.24■□□□□ 0.03
ECHDC1-220ENST00000528402 GRIK1P39086 918 aa15.24■□□□□ 0.03
ECHDC1-220ENST00000528402 MAGEA3P43357 314 aa15.24■□□□□ 0.03
ECHDC1-220ENST00000528402 MAGEA11P43364 429 aa15.24■□□□□ 0.03
ECHDC1-220ENST00000528402 CACNA2D1P54289 1103 aa15.24■□□□□ 0.03
ECHDC1-220ENST00000528402 COG7P83436 770 aa15.24■□□□□ 0.03
ECHDC1-220ENST00000528402 ELAVL2Q12926 359 aaKnown RBP15.24■□□□□ 0.03
ECHDC1-220ENST00000528402 MBTPS1Q14703 1052 aa15.24■□□□□ 0.03
ECHDC1-220ENST00000528402 CLLU1OSQ5K130 101 aa15.24■□□□□ 0.03
ECHDC1-220ENST00000528402 BTBD8Q5XKL5 378 aa15.24■□□□□ 0.03
ECHDC1-220ENST00000528402 ABI1Q8IZP0 508 aa15.24■□□□□ 0.03
ECHDC1-220ENST00000528402 CACNA2D3Q8IZS8 1091 aa15.24■□□□□ 0.03
ECHDC1-220ENST00000528402 CKAP2Q8WWK9 683 aa15.24■□□□□ 0.03
ECHDC1-220ENST00000528402 C8orf48Q96LL4 319 aa15.24■□□□□ 0.03
ECHDC1-220ENST00000528402 HAPLN3Q96S86 360 aa15.24■□□□□ 0.03
ECHDC1-220ENST00000528402 PRMT1Q99873 361 aaKnown RBP15.24■□□□□ 0.03
ECHDC1-220ENST00000528402 NAT9Q9BTE0 207 aa15.24■□□□□ 0.03
ECHDC1-220ENST00000528402 TRABDQ9H4I3 376 aa15.24■□□□□ 0.03
ECHDC1-220ENST00000528402 FBXO44Q9H4M3 255 aa15.24■□□□□ 0.03
ECHDC1-220ENST00000528402 TBC1D13Q9NVG8 400 aa15.24■□□□□ 0.03
ECHDC1-220ENST00000528402 TMLHEQ9NVH6 421 aa15.24■□□□□ 0.03
ECHDC1-220ENST00000528402 COMMD8Q9NX08 183 aa15.24■□□□□ 0.03
ECHDC1-220ENST00000528402 IGSF9Q9P2J2 1179 aa15.24■□□□□ 0.03
ECHDC1-220ENST00000528402 CTNNAL1Q9UBT7 734 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms